RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 M0R2P5 195 aa7.68□□□□□ -1.18
RNF40-202ENST00000357890 PAPPA-AS1Q5QFB9 102 aa7.68□□□□□ -1.18
RNF40-202ENST00000357890 DGAT2L7PQ6IED9 249 aa7.68□□□□□ -1.18
RNF40-202ENST00000357890 Q8N1Y9 231 aa7.68□□□□□ -1.18
RNF40-202ENST00000357890 IGHV3-11P01762 117 aa7.68□□□□□ -1.18
RNF40-202ENST00000357890 SRD5A1P18405 259 aa7.68□□□□□ -1.18
RNF40-202ENST00000357890 TMEM101Q96IK0 257 aa7.68□□□□□ -1.18
RNF40-202ENST00000357890 TRBV7-3A0A075B6L6 115 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 J3QQQ9 107 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 ATP6V0E1O15342 81 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 LY6EQ16553 131 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 LY6G5BQ8NDX9 201 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 RNF185Q96GF1 192 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 CARD19Q96LW7 228 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 DPH3P1Q9H4G8 78 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 C11orf86A6NJI1 115 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 PF4V1P10720 104 aa7.67□□□□□ -1.18
RNF40-202ENST00000357890 CRLF1O75462 422 aa7.66□□□□□ -1.18
RNF40-202ENST00000357890 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
RNF40-202ENST00000357890 RPL39P62891 51 aaKnown RBP7.66□□□□□ -1.18
RNF40-202ENST00000357890 FBXL19-AS1Q494R0 122 aa7.66□□□□□ -1.18
RNF40-202ENST00000357890 LINC01620Q4KN68 170 aa7.66□□□□□ -1.18
RNF40-202ENST00000357890 AGPAT4-IT1Q9H0P7 198 aa7.66□□□□□ -1.18
RNF40-202ENST00000357890 U3KQK5 164 aa7.66□□□□□ -1.18
RNF40-202ENST00000357890 BAALCQ8WXS3 180 aa7.66□□□□□ -1.18
RNF40-202ENST00000357890 AJUBAQ96IF1 538 aa7.66□□□□□ -1.18
RNF40-202ENST00000357890 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.65□□□□□ -1.18
RNF40-202ENST00000357890 SAA4P35542 130 aa7.65□□□□□ -1.18
RNF40-202ENST00000357890 CRIP2P52943 208 aaPredicted RBP7.65□□□□□ -1.18
RNF40-202ENST00000357890 ZNF625Q96I27 306 aaPredicted RBP7.65□□□□□ -1.18
RNF40-202ENST00000357890 CD7P09564 240 aa7.65□□□□□ -1.18
RNF40-202ENST00000357890 DEFB1P60022 68 aa7.65□□□□□ -1.18
RNF40-202ENST00000357890 MUSTN1Q8IVN3 82 aa7.65□□□□□ -1.18
RNF40-202ENST00000357890 PRO0461Q9UI25 63 aa7.65□□□□□ -1.18
RNF40-202ENST00000357890 IGHV7-81A0A0B4J1V7 117 aa7.65□□□□□ -1.19
RNF40-202ENST00000357890 DUX5Q96PT3 197 aa7.65□□□□□ -1.19
RNF40-202ENST00000357890 PAX8Q06710 450 aa7.64□□□□□ -1.19
RNF40-202ENST00000357890 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
RNF40-202ENST00000357890 M0QXV9 152 aa7.64□□□□□ -1.19
RNF40-202ENST00000357890 Q6ZS46 218 aa7.64□□□□□ -1.19
RNF40-202ENST00000357890 TRAV21A0A0B4J279 112 aa7.64□□□□□ -1.19
RNF40-202ENST00000357890 RHODO00212 210 aa7.64□□□□□ -1.19
RNF40-202ENST00000357890 IGLC6P0CF74 106 aa7.64□□□□□ -1.19
RNF40-202ENST00000357890 FHL3Q13643 280 aa7.64□□□□□ -1.19
RNF40-202ENST00000357890 CLEC2BQ92478 149 aa7.64□□□□□ -1.19
RNF40-202ENST00000357890 IGHV3-73A0A0B4J1V6 119 aa7.63□□□□□ -1.19
RNF40-202ENST00000357890 RBAKDNA6NC62 111 aa7.63□□□□□ -1.19
RNF40-202ENST00000357890 ZZEF1O43149 2961 aa7.63□□□□□ -1.19
RNF40-202ENST00000357890 BUB3O43684 328 aa7.63□□□□□ -1.19
RNF40-202ENST00000357890 GAGE2AQ6NT46 116 aa7.63□□□□□ -1.19
RNF40-202ENST00000357890 FAM110DQ8TAY7 271 aaPredicted RBP7.63□□□□□ -1.19
RNF40-202ENST00000357890 ODF3BA8MYP8 253 aa7.63□□□□□ -1.19
RNF40-202ENST00000357890 PPP1R17O96001 155 aa7.63□□□□□ -1.19
RNF40-202ENST00000357890 BRD3OSQ6XYD6 125 aa7.63□□□□□ -1.19
RNF40-202ENST00000357890 LINC00477Q96M19 166 aa7.63□□□□□ -1.19
RNF40-202ENST00000357890 OPRPNQ99935 248 aaPredicted RBP7.63□□□□□ -1.19
RNF40-202ENST00000357890 MAP1AP78559 2803 aaPredicted RBP7.63□□□□□ -1.19
RNF40-202ENST00000357890 CD28P10747 220 aa7.62□□□□□ -1.19
RNF40-202ENST00000357890 HOXB4P17483 251 aaPredicted RBP7.62□□□□□ -1.19
RNF40-202ENST00000357890 ZNF292O60281 2723 aa7.62□□□□□ -1.19
RNF40-202ENST00000357890 GNRH2O43555 120 aa7.62□□□□□ -1.19
RNF40-202ENST00000357890 UBE2E1P51965 193 aa7.62□□□□□ -1.19
RNF40-202ENST00000357890 AKAP13Q12802 2813 aa7.62□□□□□ -1.19
RNF40-202ENST00000357890 TRGV11A0A075B6L2 103 aa7.62□□□□□ -1.19
RNF40-202ENST00000357890 MRPS12O15235 138 aaKnown RBP7.62□□□□□ -1.19
RNF40-202ENST00000357890 RNASE1P07998 156 aaKnown RBP7.62□□□□□ -1.19
RNF40-202ENST00000357890 ADORA2A-AS1P86434 159 aa7.62□□□□□ -1.19
RNF40-202ENST00000357890 LY6DQ14210 128 aa7.62□□□□□ -1.19
RNF40-202ENST00000357890 BPESC1Q9GZL8 116 aa7.62□□□□□ -1.19
RNF40-202ENST00000357890 ASH1LQ9NR48 2969 aaKnown RBP7.62□□□□□ -1.19
RNF40-202ENST00000357890 SDHAF1A6NFY7 115 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 PRORYQ9H606 182 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 SMAD5-AS1Q9Y6J3 95 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 USP9YO00507 2555 aaPredicted RBP7.61□□□□□ -1.19
RNF40-202ENST00000357890 TRAV41A0A0B4J266 112 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 A0A0J9YY99 117 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 F6UB75 175 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 Q8N9W7 124 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 VCYO14598 125 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 ZFP36P26651 326 aaKnown RBP7.61□□□□□ -1.19
RNF40-202ENST00000357890 ZNF876PQ49A33 203 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 DAND5Q8N907 189 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 RASL10AQ92737 203 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 HIVEP3Q5T1R4 2406 aa7.61□□□□□ -1.19
RNF40-202ENST00000357890 TRAV12-1A0A0B4J245 112 aa7.6□□□□□ -1.19
RNF40-202ENST00000357890 TIMM21Q9BVV7 248 aa7.6□□□□□ -1.19
RNF40-202ENST00000357890 ZMAT4Q9H898 229 aa7.6□□□□□ -1.19
RNF40-202ENST00000357890 TRBV7-1A0A0A6YYK4 115 aa7.6□□□□□ -1.19
RNF40-202ENST00000357890 ATP5J2P56134 94 aa7.6□□□□□ -1.19
RNF40-202ENST00000357890 OR13C6PQ8NH95 151 aa7.6□□□□□ -1.19
RNF40-202ENST00000357890 TRAV13-1A0A0B4J241 112 aa7.6□□□□□ -1.19
RNF40-202ENST00000357890 CIRBPQ14011 172 aaKnown RBP7.6□□□□□ -1.19
RNF40-202ENST00000357890 FAM110AQ9BQ89 295 aa7.6□□□□□ -1.19
RNF40-202ENST00000357890 NPFFO15130 113 aa7.59□□□□□ -1.19
RNF40-202ENST00000357890 DNAL4O96015 105 aa7.59□□□□□ -1.19
RNF40-202ENST00000357890 TOMM6Q96B49 74 aa7.59□□□□□ -1.19
RNF40-202ENST00000357890 A0A0J9YXV3 536 aa7.59□□□□□ -1.19
RNF40-202ENST00000357890 NEXN-AS1Q8NBZ9 246 aa7.59□□□□□ -1.19
RNF40-202ENST00000357890 PIFOQ8TCI5 191 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms