RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 PF4V1P10720 104 aa13.25□□□□□ -0.29
RTN4-204ENST00000357732 FOXI1Q12951 378 aa13.25□□□□□ -0.29
RTN4-204ENST00000357732 RHOHQ15669 191 aa13.25□□□□□ -0.29
RTN4-204ENST00000357732 NDUFA11Q86Y39 141 aa13.25□□□□□ -0.29
RTN4-204ENST00000357732 SLC25A29Q8N8R3 303 aa13.25□□□□□ -0.29
RTN4-204ENST00000357732 AKAP6Q13023 2319 aa13.25□□□□□ -0.29
RTN4-204ENST00000357732 DEFB1P60022 68 aa13.24□□□□□ -0.29
RTN4-204ENST00000357732 SYT8Q8NBV8 401 aa13.24□□□□□ -0.29
RTN4-204ENST00000357732 SDHAF1A6NFY7 115 aa13.24□□□□□ -0.29
RTN4-204ENST00000357732 SMAGPQ0VAQ4 97 aa13.24□□□□□ -0.29
RTN4-204ENST00000357732 NFE4Q86UQ8 179 aa13.24□□□□□ -0.29
RTN4-204ENST00000357732 PIMREGQ9BSJ6 248 aa13.24□□□□□ -0.29
RTN4-204ENST00000357732 IGHV3-11P01762 117 aa13.23□□□□□ -0.29
RTN4-204ENST00000357732 NSUN5P1Q3KNT7 163 aa13.23□□□□□ -0.29
RTN4-204ENST00000357732 DCANP1Q8TF63 244 aa13.23□□□□□ -0.29
RTN4-204ENST00000357732 C9orf85Q96MD7 179 aa13.23□□□□□ -0.29
RTN4-204ENST00000357732 CELSR1Q9NYQ6 3014 aa13.23□□□□□ -0.29
RTN4-204ENST00000357732 IGHV3-30P01768 117 aa13.23□□□□□ -0.29
RTN4-204ENST00000357732 IGHV3-30-5P0DP03 117 aa13.23□□□□□ -0.29
RTN4-204ENST00000357732 KLHL30-AS1Q8NEE0 82 aa13.23□□□□□ -0.29
RTN4-204ENST00000357732 A0A1B0GV72 72 aa13.22□□□□□ -0.29
RTN4-204ENST00000357732 CFHR3Q02985 330 aa13.22□□□□□ -0.29
RTN4-204ENST00000357732 H3BUX3 64 aa13.21□□□□□ -0.29
RTN4-204ENST00000357732 GNLYP22749 145 aa13.21□□□□□ -0.29
RTN4-204ENST00000357732 LY6EQ16553 131 aa13.21□□□□□ -0.29
RTN4-204ENST00000357732 TCTEX1D4Q5JR98 221 aa13.21□□□□□ -0.29
RTN4-204ENST00000357732 MUC4Q99102 2169 aa13.21□□□□□ -0.29
RTN4-204ENST00000357732 LOC107984156A0A0G2JMH3 177 aa13.21□□□□□ -0.3
RTN4-204ENST00000357732 F5H697 171 aa13.21□□□□□ -0.3
RTN4-204ENST00000357732 ARL17AQ8IVW1 177 aa13.21□□□□□ -0.3
RTN4-204ENST00000357732 C10orf126Q8N4M7 172 aa13.21□□□□□ -0.3
RTN4-204ENST00000357732 IGHV4-61A0A0C4DH41 118 aa13.2□□□□□ -0.3
RTN4-204ENST00000357732 SMCPP49901 116 aaPredicted RBP13.2□□□□□ -0.3
RTN4-204ENST00000357732 TMEM170BQ5T4T1 132 aa13.2□□□□□ -0.3
RTN4-204ENST00000357732 SBSPONQ8IVN8 264 aa13.2□□□□□ -0.3
RTN4-204ENST00000357732 ITPR1Q14643 2758 aa13.2□□□□□ -0.3
RTN4-204ENST00000357732 IGHV3-16A0A0C4DH30 117 aa13.2□□□□□ -0.3
RTN4-204ENST00000357732 J3QQQ9 107 aa13.2□□□□□ -0.3
RTN4-204ENST00000357732 IGHV4-38-2P0DP08 117 aa13.2□□□□□ -0.3
RTN4-204ENST00000357732 PSMB2P49721 201 aa13.2□□□□□ -0.3
RTN4-204ENST00000357732 RPL39P62891 51 aaKnown RBP13.2□□□□□ -0.3
RTN4-204ENST00000357732 TRPT1Q86TN4 253 aaKnown RBP13.2□□□□□ -0.3
RTN4-204ENST00000357732 LGALS3P17931 250 aaKnown RBP13.19□□□□□ -0.3
RTN4-204ENST00000357732 ZNRF2Q8NHG8 242 aa13.19□□□□□ -0.3
RTN4-204ENST00000357732 AMELXQ99217 191 aa13.19□□□□□ -0.3
RTN4-204ENST00000357732 ABCA2Q9BZC7 2435 aa13.19□□□□□ -0.3
RTN4-204ENST00000357732 IGKV3-7A0A075B6H7 116 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 M0QXV9 152 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 TEN1Q86WV5 123 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 MTURNQ8N3F0 131 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 PPDPFLQ8WWR9 84 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 A0A087WWL8 130 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 TMEM89A2RUT3 159 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 M0QY20 66 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 LEPROTO15243 131 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 CFC1BP0CG36 223 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 CFC1P0CG37 223 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 CLEC2AQ6UVW9 174 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 PRO1854Q9UHT4 67 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 SPTBN4Q9H254 2564 aa13.18□□□□□ -0.3
RTN4-204ENST00000357732 TRAV12-3A0A0B4J271 114 aa13.17□□□□□ -0.3
RTN4-204ENST00000357732 INSL3P51460 131 aa13.17□□□□□ -0.3
RTN4-204ENST00000357732 RNF152Q8N8N0 203 aa13.17□□□□□ -0.3
RTN4-204ENST00000357732 C10orf105Q8TEF2 133 aa13.17□□□□□ -0.3
RTN4-204ENST00000357732 JPT2Q9H910 190 aa13.17□□□□□ -0.3
RTN4-204ENST00000357732 CHD8Q9HCK8 2581 aa13.17□□□□□ -0.3
RTN4-204ENST00000357732 TSPEAR-AS2P59090 65 aa13.17□□□□□ -0.3
RTN4-204ENST00000357732 SNRPD3P62318 126 aaKnown RBP13.17□□□□□ -0.3
RTN4-204ENST00000357732 NCOR2Q9Y618 2525 aa13.16□□□□□ -0.3
RTN4-204ENST00000357732 A0A0J9YX75 114 aa13.16□□□□□ -0.3
RTN4-204ENST00000357732 BLCAPP62952 87 aa13.16□□□□□ -0.3
RTN4-204ENST00000357732 TMEM223A0PJW6 202 aa13.16□□□□□ -0.3
RTN4-204ENST00000357732 EDA2RQ9HAV5 297 aa13.16□□□□□ -0.3
RTN4-204ENST00000357732 ZNF256Q9Y2P7 627 aaPredicted RBP13.16□□□□□ -0.3
RTN4-204ENST00000357732 EMP1P54849 157 aa13.15□□□□□ -0.3
RTN4-204ENST00000357732 Q6ZS46 218 aa13.15□□□□□ -0.3
RTN4-204ENST00000357732 A8MWV9 139 aa13.15□□□□□ -0.3
RTN4-204ENST00000357732 ZNF56Q15929 161 aa13.15□□□□□ -0.3
RTN4-204ENST00000357732 IGHV1OR15-1A0A075B7D0 117 aa13.14□□□□□ -0.31
RTN4-204ENST00000357732 A0A0B4J2C4 111 aa13.14□□□□□ -0.31
RTN4-204ENST00000357732 TCL1BO95988 128 aa13.14□□□□□ -0.31
RTN4-204ENST00000357732 PSMB8P28062 276 aa13.14□□□□□ -0.31
RTN4-204ENST00000357732 CRYBA4P53673 196 aa13.14□□□□□ -0.31
RTN4-204ENST00000357732 C20orf203Q8NBC4 194 aa13.14□□□□□ -0.31
RTN4-204ENST00000357732 PRORYQ9H606 182 aa13.14□□□□□ -0.31
RTN4-204ENST00000357732 I3L3M4 83 aa13.14□□□□□ -0.31
RTN4-204ENST00000357732 FAM74A4Q5TZK3 123 aa13.14□□□□□ -0.31
RTN4-204ENST00000357732 SRD5A1P18405 259 aa13.13□□□□□ -0.31
RTN4-204ENST00000357732 CDIP1Q9H305 208 aa13.13□□□□□ -0.31
RTN4-204ENST00000357732 MSMBP08118 114 aa13.13□□□□□ -0.31
RTN4-204ENST00000357732 Q8N1Y9 231 aa13.13□□□□□ -0.31
RTN4-204ENST00000357732 TRGV11A0A075B6L2 103 aa13.12□□□□□ -0.31
RTN4-204ENST00000357732 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.12□□□□□ -0.31
RTN4-204ENST00000357732 K7EQG2 157 aa13.12□□□□□ -0.31
RTN4-204ENST00000357732 ZNF418Q8TF45 676 aaPredicted RBP13.12□□□□□ -0.31
RTN4-204ENST00000357732 CCL19Q99731 98 aa13.12□□□□□ -0.31
RTN4-204ENST00000357732 RHODO00212 210 aa13.12□□□□□ -0.31
RTN4-204ENST00000357732 PYGO1Q9Y3Y4 419 aa13.12□□□□□ -0.31
RTN4-204ENST00000357732 P0DMU3 169 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms