RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 IGHV1-69P01742 117 aa11.51□□□□□ -0.57
PTBP1-203ENST00000356948 C19orf54Q5BKX5 351 aa11.51□□□□□ -0.57
PTBP1-203ENST00000356948 ZMAT4Q9H898 229 aa11.51□□□□□ -0.57
PTBP1-203ENST00000356948 NXT2Q9NPJ8 142 aaKnown RBP11.51□□□□□ -0.57
PTBP1-203ENST00000356948 MOB4Q9Y3A3 225 aa11.51□□□□□ -0.57
PTBP1-203ENST00000356948 TMEM238LA0A1B0GVL6 79 aa11.5□□□□□ -0.57
PTBP1-203ENST00000356948 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
PTBP1-203ENST00000356948 RASL10AQ92737 203 aa11.5□□□□□ -0.57
PTBP1-203ENST00000356948 SONP18583 2426 aaKnown RBP11.5□□□□□ -0.57
PTBP1-203ENST00000356948 E9PLD3 99 aa11.5□□□□□ -0.57
PTBP1-203ENST00000356948 EPG5Q9HCE0 2579 aa11.5□□□□□ -0.57
PTBP1-203ENST00000356948 ZNF462Q96JM2 2506 aa11.5□□□□□ -0.57
PTBP1-203ENST00000356948 S100A4P26447 101 aaKnown RBP11.49□□□□□ -0.57
PTBP1-203ENST00000356948 Q6ZUT4 128 aa11.49□□□□□ -0.57
PTBP1-203ENST00000356948 KLHL30-AS1Q8NEE0 82 aa11.49□□□□□ -0.57
PTBP1-203ENST00000356948 C1QTNF4Q9BXJ3 329 aa11.49□□□□□ -0.57
PTBP1-203ENST00000356948 UCNP55089 124 aa11.49□□□□□ -0.57
PTBP1-203ENST00000356948 LAGE3Q14657 143 aa11.49□□□□□ -0.57
PTBP1-203ENST00000356948 DPF1Q92782 380 aa11.49□□□□□ -0.57
PTBP1-203ENST00000356948 GAGE5Q13069 117 aa11.49□□□□□ -0.57
PTBP1-203ENST00000356948 GAGE6Q13070 117 aa11.49□□□□□ -0.57
PTBP1-203ENST00000356948 SCGB3A1Q96QR1 104 aa11.49□□□□□ -0.57
PTBP1-203ENST00000356948 A8MWV9 139 aa11.48□□□□□ -0.57
PTBP1-203ENST00000356948 SHISA2Q6UWI4 295 aa11.48□□□□□ -0.57
PTBP1-203ENST00000356948 IGHV3-64A0A075B6Q5 118 aa11.48□□□□□ -0.57
PTBP1-203ENST00000356948 RNF223E7ERA6 249 aa11.48□□□□□ -0.57
PTBP1-203ENST00000356948 SOCS3O14543 225 aa11.48□□□□□ -0.57
PTBP1-203ENST00000356948 CHD6Q8TD26 2715 aa11.48□□□□□ -0.57
PTBP1-203ENST00000356948 LINC01546A6NGU7 62 aa11.48□□□□□ -0.57
PTBP1-203ENST00000356948 C9JAW5 83 aa11.48□□□□□ -0.57
PTBP1-203ENST00000356948 SRSF2Q01130 221 aaKnown RBP11.48□□□□□ -0.57
PTBP1-203ENST00000356948 SMPXQ9UHP9 88 aa11.48□□□□□ -0.57
PTBP1-203ENST00000356948 A6NJY4 79 aa11.47□□□□□ -0.57
PTBP1-203ENST00000356948 RHPN1-AS1Q9BWJ2 59 aa11.47□□□□□ -0.57
PTBP1-203ENST00000356948 A0A087WWL8 130 aa11.47□□□□□ -0.57
PTBP1-203ENST00000356948 DUX5Q96PT3 197 aa11.47□□□□□ -0.57
PTBP1-203ENST00000356948 SPATA25Q9BR10 227 aa11.47□□□□□ -0.57
PTBP1-203ENST00000356948 TRAV12-2A0A075B6T6 113 aa11.47□□□□□ -0.57
PTBP1-203ENST00000356948 ATP5LO75964 103 aa11.47□□□□□ -0.57
PTBP1-203ENST00000356948 TMEM170BQ5T4T1 132 aa11.47□□□□□ -0.57
PTBP1-203ENST00000356948 PRSS2P07478 247 aa11.46□□□□□ -0.57
PTBP1-203ENST00000356948 RNASE3P12724 160 aaKnown RBP11.46□□□□□ -0.57
PTBP1-203ENST00000356948 TCTEX1D4Q5JR98 221 aa11.46□□□□□ -0.57
PTBP1-203ENST00000356948 CFAP161Q6P656 301 aa11.46□□□□□ -0.57
PTBP1-203ENST00000356948 PRM2P04554 102 aa11.46□□□□□ -0.58
PTBP1-203ENST00000356948 SLC25A16P16260 332 aa11.46□□□□□ -0.58
PTBP1-203ENST00000356948 PHLDA3Q9Y5J5 127 aa11.46□□□□□ -0.58
PTBP1-203ENST00000356948 KLK9Q2XQG4 91 aa11.45□□□□□ -0.58
PTBP1-203ENST00000356948 KLK9Q9UKQ9 250 aa11.45□□□□□ -0.58
PTBP1-203ENST00000356948 WNK1Q9H4A3 2382 aa11.45□□□□□ -0.58
PTBP1-203ENST00000356948 NFE4Q86UQ8 179 aa11.44□□□□□ -0.58
PTBP1-203ENST00000356948 SMIM2Q9BVW6 85 aa11.44□□□□□ -0.58
PTBP1-203ENST00000356948 OR10J6PQ8NGY7 276 aa11.44□□□□□ -0.58
PTBP1-203ENST00000356948 TRAV12-3A0A0B4J271 114 aa11.43□□□□□ -0.58
PTBP1-203ENST00000356948 F5H697 171 aa11.43□□□□□ -0.58
PTBP1-203ENST00000356948 ATP5J2P56134 94 aa11.43□□□□□ -0.58
PTBP1-203ENST00000356948 SUMO2P61956 95 aaKnown RBP11.43□□□□□ -0.58
PTBP1-203ENST00000356948 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
PTBP1-203ENST00000356948 SRSF1Q07955 248 aaKnown RBP eCLIP11.43□□□□□ -0.582e-10■■■□□ 18.2
PTBP1-203ENST00000356948 C9orf139Q6ZV77 190 aa11.43□□□□□ -0.58
PTBP1-203ENST00000356948 PPDPFLQ8WWR9 84 aa11.43□□□□□ -0.58
PTBP1-203ENST00000356948 CCL19Q99731 98 aa11.43□□□□□ -0.58
PTBP1-203ENST00000356948 PRADC1Q9BSG0 188 aa11.43□□□□□ -0.58
PTBP1-203ENST00000356948 A0A087WX48 190 aa11.42□□□□□ -0.58
PTBP1-203ENST00000356948 DUSP14O95147 198 aaKnown RBP11.42□□□□□ -0.58
PTBP1-203ENST00000356948 LYRM7Q5U5X0 104 aa11.42□□□□□ -0.58
PTBP1-203ENST00000356948 PHLDA1Q8WV24 401 aaPredicted RBP11.42□□□□□ -0.58
PTBP1-203ENST00000356948 FAM223BA6NKX1 122 aa11.42□□□□□ -0.58
PTBP1-203ENST00000356948 IGHV4-59P01825 116 aa11.42□□□□□ -0.58
PTBP1-203ENST00000356948 ZNF688P0C7X2 276 aa11.42□□□□□ -0.58
PTBP1-203ENST00000356948 FAM223AQ8IWN6 122 aa11.42□□□□□ -0.58
PTBP1-203ENST00000356948 TMEM190Q8WZ59 177 aa11.42□□□□□ -0.58
PTBP1-203ENST00000356948 NAV2Q8IVL1 2488 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 MYMXA0A1B0GTQ4 84 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 FAM74A4Q5TZK3 123 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 LINC00477Q96M19 166 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 IGHV4-4A0A075B6R2 117 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 NDUFA4O00483 81 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 IGHG2P01859 326 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 ASIPP42127 132 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 C10orf105Q8TEF2 133 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 TM2D2Q9BX73 214 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 GAGE12JA6NER3 117 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 GAGE7O76087 117 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 GAGE12FP0CL80 117 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 GAGE12GP0CL81 117 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 GAGE12IP0CL82 117 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 GAGE4Q13068 117 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
PTBP1-203ENST00000356948 OPRPNQ99935 248 aaPredicted RBP11.41□□□□□ -0.58
PTBP1-203ENST00000356948 CCDC168Q8NDH2 2452 aa11.4□□□□□ -0.58
PTBP1-203ENST00000356948 TRAV21A0A0B4J279 112 aa11.4□□□□□ -0.58
PTBP1-203ENST00000356948 A6NDX4 124 aa11.4□□□□□ -0.58
PTBP1-203ENST00000356948 ANKRD29Q8N6D5 301 aa11.4□□□□□ -0.58
PTBP1-203ENST00000356948 MDFICQ9P1T7 246 aa11.4□□□□□ -0.58
PTBP1-203ENST00000356948 HIGD1BQ9P298 99 aa11.4□□□□□ -0.58
PTBP1-203ENST00000356948 TRAV2A0A0B4J234 112 aa11.39□□□□□ -0.59
PTBP1-203ENST00000356948 CCDC179H3BU77 68 aa11.39□□□□□ -0.59
PTBP1-203ENST00000356948 NPC2P61916 151 aa11.39□□□□□ -0.59
PTBP1-203ENST00000356948 BAALCQ8WXS3 180 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms