RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 BIN3Q9NQY0 253 aa12.85□□□□□ -0.35
VPS72-201ENST00000354473 HECTD4Q9Y4D8 3996 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 GAGE12JA6NER3 117 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 TMEM250H0YL14 139 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 P01737 135 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 GZMBP10144 247 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 GAGE1Q13065 139 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 GAGE4Q13068 117 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 GAGE5Q13069 117 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 GAGE13Q4V321 117 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 TOR2AQ5JU69 321 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
VPS72-201ENST00000354473 RPS20P60866 119 aaKnown RBP12.83□□□□□ -0.36
VPS72-201ENST00000354473 ATP6V0E2Q8NHE4 81 aa12.83□□□□□ -0.36
VPS72-201ENST00000354473 Q9UF83 564 aa12.83□□□□□ -0.36
VPS72-201ENST00000354473 LY96Q9Y6Y9 160 aa12.83□□□□□ -0.36
VPS72-201ENST00000354473 CEBPGP53567 150 aa12.82□□□□□ -0.36
VPS72-201ENST00000354473 SSTP61278 116 aa12.82□□□□□ -0.36
VPS72-201ENST00000354473 TPPP3Q9BW30 176 aa12.82□□□□□ -0.36
VPS72-201ENST00000354473 EIF5A2Q9GZV4 153 aaKnown RBP12.82□□□□□ -0.36
VPS72-201ENST00000354473 LINC00694P0DN24 101 aa12.81□□□□□ -0.36
VPS72-201ENST00000354473 LINC00315P59091 139 aa12.81□□□□□ -0.36
VPS72-201ENST00000354473 TNP2Q05952 138 aa12.81□□□□□ -0.36
VPS72-201ENST00000354473 FER1L6-AS1Q8NA97 138 aa12.81□□□□□ -0.36
VPS72-201ENST00000354473 GTSF1LQ9H1H1 148 aa12.81□□□□□ -0.36
VPS72-201ENST00000354473 XKRY2A2RUG3 117 aa12.8□□□□□ -0.36
VPS72-201ENST00000354473 K7EN84 100 aa12.8□□□□□ -0.36
VPS72-201ENST00000354473 IGLC6P0CF74 106 aa12.8□□□□□ -0.36
VPS72-201ENST00000354473 DNAH10OSP0CZ25 163 aa12.8□□□□□ -0.36
VPS72-201ENST00000354473 OCC1Q8TAD7 63 aa12.8□□□□□ -0.36
VPS72-201ENST00000354473 FAM210AQ96ND0 272 aa12.8□□□□□ -0.36
VPS72-201ENST00000354473 TRAV9-2A0A087WT02 112 aa12.79□□□□□ -0.36
VPS72-201ENST00000354473 TRAV8-6A0A0B4J262 113 aa12.79□□□□□ -0.36
VPS72-201ENST00000354473 BTF3P20290 206 aaKnown RBP12.79□□□□□ -0.36
VPS72-201ENST00000354473 EVI2AP22794 236 aa12.79□□□□□ -0.36
VPS72-201ENST00000354473 ZNF56Q15929 161 aa12.79□□□□□ -0.36
VPS72-201ENST00000354473 OR10J3Q5JRS4 329 aa12.79□□□□□ -0.36
VPS72-201ENST00000354473 LELP1Q5T871 98 aa12.79□□□□□ -0.36
VPS72-201ENST00000354473 NUDT10Q8NFP7 164 aa12.79□□□□□ -0.36
VPS72-201ENST00000354473 NUDT11Q96G61 164 aa12.79□□□□□ -0.36
VPS72-201ENST00000354473 TEX261Q6UWH6 196 aa12.78□□□□□ -0.36
VPS72-201ENST00000354473 AP1S3Q96PC3 154 aa12.78□□□□□ -0.36
VPS72-201ENST00000354473 RNASE7Q9H1E1 156 aaKnown RBP12.78□□□□□ -0.36
VPS72-201ENST00000354473 DNAH2Q9P225 4427 aa12.78□□□□□ -0.36
VPS72-201ENST00000354473 FAT2Q9NYQ8 4349 aa12.77□□□□□ -0.36
VPS72-201ENST00000354473 IGHV3-38A0A0C4DH36 116 aa12.77□□□□□ -0.37
VPS72-201ENST00000354473 RAB4BP61018 213 aa12.77□□□□□ -0.37
VPS72-201ENST00000354473 RPP21Q9H633 154 aaKnown RBP12.77□□□□□ -0.37
VPS72-201ENST00000354473 TRBV10-1A0A0K0K1A3 114 aa12.76□□□□□ -0.37
VPS72-201ENST00000354473 K7EP13 123 aa12.76□□□□□ -0.37
VPS72-201ENST00000354473 SMIM17P0DL12 118 aa12.76□□□□□ -0.37
VPS72-201ENST00000354473 SMIM7Q9BQ49 75 aa12.76□□□□□ -0.37
VPS72-201ENST00000354473 F2Z2F3 143 aa12.75□□□□□ -0.37
VPS72-201ENST00000354473 F5H697 171 aa12.75□□□□□ -0.37
VPS72-201ENST00000354473 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
VPS72-201ENST00000354473 CACNG7P62955 275 aa12.75□□□□□ -0.37
VPS72-201ENST00000354473 LINC01556Q5JQF7 62 aa12.75□□□□□ -0.37
VPS72-201ENST00000354473 LYZL1Q6UWQ5 148 aa12.75□□□□□ -0.37
VPS72-201ENST00000354473 TNFRSF18Q9Y5U5 241 aa12.75□□□□□ -0.37
VPS72-201ENST00000354473 DNAH17Q9UFH2 4485 aa12.75□□□□□ -0.37
VPS72-201ENST00000354473 SRP19P09132 144 aaKnown RBP12.74□□□□□ -0.37
VPS72-201ENST00000354473 RPL36AP83881 106 aaKnown RBP12.74□□□□□ -0.37
VPS72-201ENST00000354473 Q6ZRN7 208 aaPredicted RBP12.74□□□□□ -0.37
VPS72-201ENST00000354473 C10orf126Q8N4M7 172 aa12.74□□□□□ -0.37
VPS72-201ENST00000354473 RPL36ALQ969Q0 106 aaKnown RBP12.74□□□□□ -0.37
VPS72-201ENST00000354473 MSRB1Q9NZV6 116 aa12.74□□□□□ -0.37
VPS72-201ENST00000354473 KIF25-AS1Q9Y6Z4 181 aa12.74□□□□□ -0.37
VPS72-201ENST00000354473 CTRLP40313 264 aa12.73□□□□□ -0.37
VPS72-201ENST00000354473 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
VPS72-201ENST00000354473 A0A087WWC5 75 aa12.72□□□□□ -0.37
VPS72-201ENST00000354473 ZNF727A8MUV8 499 aa12.72□□□□□ -0.37
VPS72-201ENST00000354473 IGHV3-30P01768 117 aa12.72□□□□□ -0.37
VPS72-201ENST00000354473 IGHV3-33P01772 117 aa12.72□□□□□ -0.37
VPS72-201ENST00000354473 MGPP08493 103 aa12.72□□□□□ -0.37
VPS72-201ENST00000354473 IGHV3-30-3P0DP02 117 aa12.72□□□□□ -0.37
VPS72-201ENST00000354473 IGHV3-30-5P0DP03 117 aa12.72□□□□□ -0.37
VPS72-201ENST00000354473 NFE4Q86UQ8 179 aa12.72□□□□□ -0.37
VPS72-201ENST00000354473 UBE2D3P61077 147 aa12.71□□□□□ -0.37
VPS72-201ENST00000354473 UBE2D2P62837 147 aa12.71□□□□□ -0.37
VPS72-201ENST00000354473 NEXN-AS1Q8NBZ9 246 aa12.71□□□□□ -0.37
VPS72-201ENST00000354473 OR10G8Q8NGN5 311 aa12.71□□□□□ -0.37
VPS72-201ENST00000354473 GATCO43716 136 aaKnown RBP12.7□□□□□ -0.38
VPS72-201ENST00000354473 NTF3P20783 257 aa12.7□□□□□ -0.38
VPS72-201ENST00000354473 ERVFC1-1P60608 527 aa12.7□□□□□ -0.38
VPS72-201ENST00000354473 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
VPS72-201ENST00000354473 LINC01551Q86U37 167 aa12.7□□□□□ -0.38
VPS72-201ENST00000354473 PKHD1P08F94 4074 aa12.7□□□□□ -0.38
VPS72-201ENST00000354473 TRGC1P0CF51 173 aa12.69□□□□□ -0.38
VPS72-201ENST00000354473 Q8N3U1 123 aa12.69□□□□□ -0.38
VPS72-201ENST00000354473 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
VPS72-201ENST00000354473 CNFNQ9BYD5 112 aa12.69□□□□□ -0.38
VPS72-201ENST00000354473 TWIST1Q15672 202 aa12.68□□□□□ -0.38
VPS72-201ENST00000354473 WDR73Q6P4I2 378 aa12.68□□□□□ -0.38
VPS72-201ENST00000354473 C9JQL5 133 aa12.67□□□□□ -0.38
VPS72-201ENST00000354473 SRSF3P84103 164 aaKnown RBP12.67□□□□□ -0.38
VPS72-201ENST00000354473 DPH3P1Q9H4G8 78 aa12.67□□□□□ -0.38
VPS72-201ENST00000354473 A8MWL6 223 aa12.66□□□□□ -0.38
VPS72-201ENST00000354473 IBA57-AS1B1ANH7 110 aa12.66□□□□□ -0.38
VPS72-201ENST00000354473 M0QY20 66 aa12.66□□□□□ -0.38
VPS72-201ENST00000354473 PEA15Q15121 130 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms