RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 HRCT1Q6UXD1 115 aa9.99□□□□□ -0.81
IFT88-202ENST00000351808 GPHB5Q86YW7 130 aa9.99□□□□□ -0.81
IFT88-202ENST00000351808 FANCD2OSQ96PS1 177 aa9.99□□□□□ -0.81
IFT88-202ENST00000351808 IGHV3OR16-13A0A075B7E8 117 aa9.99□□□□□ -0.81
IFT88-202ENST00000351808 IGHV3-74A0A0B4J1X5 117 aa9.99□□□□□ -0.81
IFT88-202ENST00000351808 LST1O00453 97 aa9.99□□□□□ -0.81
IFT88-202ENST00000351808 LOXP28300 417 aaPredicted RBP9.99□□□□□ -0.81
IFT88-202ENST00000351808 IGHV1-69DA0A0B4J2H0 117 aa9.98□□□□□ -0.81
IFT88-202ENST00000351808 OPRPNQ99935 248 aaPredicted RBP9.98□□□□□ -0.81
IFT88-202ENST00000351808 OXTP01178 125 aa9.98□□□□□ -0.81
IFT88-202ENST00000351808 ACYP1P07311 99 aa9.98□□□□□ -0.81
IFT88-202ENST00000351808 NPC2P61916 151 aa9.98□□□□□ -0.81
IFT88-202ENST00000351808 DPH3Q96FX2 82 aa9.98□□□□□ -0.81
IFT88-202ENST00000351808 DUX5Q96PT3 197 aa9.98□□□□□ -0.81
IFT88-202ENST00000351808 I3L3M4 83 aa9.97□□□□□ -0.81
IFT88-202ENST00000351808 S100A4P26447 101 aaKnown RBP9.97□□□□□ -0.81
IFT88-202ENST00000351808 PRR9Q5T870 116 aa9.97□□□□□ -0.81
IFT88-202ENST00000351808 CCL17Q92583 94 aa9.97□□□□□ -0.81
IFT88-202ENST00000351808 PRRC2AP48634 2157 aaKnown RBP9.97□□□□□ -0.81
IFT88-202ENST00000351808 TACC2O95359 2948 aa9.97□□□□□ -0.81
IFT88-202ENST00000351808 A0A0J9YXY3 114 aa9.97□□□□□ -0.81
IFT88-202ENST00000351808 TRACP01848 142 aa9.97□□□□□ -0.81
IFT88-202ENST00000351808 IGF1P05019 195 aa9.97□□□□□ -0.81
IFT88-202ENST00000351808 ATP5G1P05496 136 aa9.97□□□□□ -0.81
IFT88-202ENST00000351808 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.96□□□□□ -0.81
IFT88-202ENST00000351808 TMEM141Q96I45 108 aa9.96□□□□□ -0.81
IFT88-202ENST00000351808 DSCR8Q96T75 97 aa9.96□□□□□ -0.81
IFT88-202ENST00000351808 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.81
IFT88-202ENST00000351808 ABCA4P78363 2273 aa9.96□□□□□ -0.81
IFT88-202ENST00000351808 PATE3B3GLJ2 98 aa9.96□□□□□ -0.81
IFT88-202ENST00000351808 CTSGP08311 255 aa9.96□□□□□ -0.81
IFT88-202ENST00000351808 COX7A1P24310 79 aa9.96□□□□□ -0.81
IFT88-202ENST00000351808 RHOHQ15669 191 aa9.96□□□□□ -0.81
IFT88-202ENST00000351808 ZDBF2Q9HCK1 2354 aa9.96□□□□□ -0.82
IFT88-202ENST00000351808 LOC400499M0QZD8 3231 aa9.96□□□□□ -0.82
IFT88-202ENST00000351808 NACAE9PAV3 2078 aa9.96□□□□□ -0.82
IFT88-202ENST00000351808 IGLV11-55A0A075B6I3 123 aa9.96□□□□□ -0.82
IFT88-202ENST00000351808 BUB1B-PAK6H3BSN5 160 aa9.96□□□□□ -0.82
IFT88-202ENST00000351808 SPANXDQ9BXN6 97 aa9.96□□□□□ -0.82
IFT88-202ENST00000351808 CACNA1BQ00975 2339 aa9.95□□□□□ -0.82
IFT88-202ENST00000351808 IGLV1-47P01700 117 aa9.95□□□□□ -0.82
IFT88-202ENST00000351808 C5orf38Q86SI9 138 aa9.95□□□□□ -0.82
IFT88-202ENST00000351808 NSUN5P1Q3KNT7 163 aa9.95□□□□□ -0.82
IFT88-202ENST00000351808 ATP1A1-AS1Q5TC04 95 aa9.95□□□□□ -0.82
IFT88-202ENST00000351808 TIMM17AQ99595 171 aa9.95□□□□□ -0.82
IFT88-202ENST00000351808 SIT1Q9Y3P8 196 aa9.95□□□□□ -0.82
IFT88-202ENST00000351808 IGHV3-49A0A0A0MS15 119 aa9.94□□□□□ -0.82
IFT88-202ENST00000351808 ADAMTSL4-AS1Q5T5F5 129 aa9.94□□□□□ -0.82
IFT88-202ENST00000351808 DCANP1Q8TF63 244 aa9.94□□□□□ -0.82
IFT88-202ENST00000351808 LITAFQ99732 161 aa9.93□□□□□ -0.82
IFT88-202ENST00000351808 TRAV12-3A0A0B4J271 114 aa9.93□□□□□ -0.82
IFT88-202ENST00000351808 TMEM178BH3BS89 294 aa9.93□□□□□ -0.82
IFT88-202ENST00000351808 C22orf34Q6ZV56 151 aa9.93□□□□□ -0.82
IFT88-202ENST00000351808 SPANXCQ9NY87 97 aa9.93□□□□□ -0.82
IFT88-202ENST00000351808 SDHAF1A6NFY7 115 aa9.93□□□□□ -0.82
IFT88-202ENST00000351808 BUB3O43684 328 aa9.93□□□□□ -0.82
IFT88-202ENST00000351808 Q5XG85 94 aa9.93□□□□□ -0.82
IFT88-202ENST00000351808 PPP1R17O96001 155 aa9.92□□□□□ -0.82
IFT88-202ENST00000351808 POLR2KP53803 58 aaKnown RBP9.92□□□□□ -0.82
IFT88-202ENST00000351808 TRBV7-1A0A0A6YYK4 115 aa9.92□□□□□ -0.82
IFT88-202ENST00000351808 A0A0J9YXV3 536 aa9.92□□□□□ -0.82
IFT88-202ENST00000351808 MAP1BP46821 2468 aaKnown RBP9.92□□□□□ -0.82
IFT88-202ENST00000351808 ATOX1O00244 68 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 RS1O15537 224 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 CXCL5P42830 114 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 RNF152Q8N8N0 203 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 FAM19A4Q96LR4 140 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 TIMM21Q9BVV7 248 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 MUC4Q99102 2169 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 A0A0J9YX75 114 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 NBR2O15453 112 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 ASCL5Q7RTU5 278 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 ZFAND3Q9H8U3 227 aa9.91□□□□□ -0.82
IFT88-202ENST00000351808 GNRH2O43555 120 aa9.9□□□□□ -0.82
IFT88-202ENST00000351808 TMEM258P61165 79 aa9.9□□□□□ -0.82
IFT88-202ENST00000351808 C9orf47Q6ZRZ4 202 aa9.9□□□□□ -0.82
IFT88-202ENST00000351808 JPT2Q9H910 190 aa9.9□□□□□ -0.82
IFT88-202ENST00000351808 CNOT1A5YKK6 2376 aaKnown RBP9.9□□□□□ -0.82
IFT88-202ENST00000351808 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.82
IFT88-202ENST00000351808 VCYO14598 125 aa9.9□□□□□ -0.82
IFT88-202ENST00000351808 IGHV3-30-3P0DP02 117 aa9.9□□□□□ -0.82
IFT88-202ENST00000351808 NCOR1O75376 2440 aa9.9□□□□□ -0.82
IFT88-202ENST00000351808 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
IFT88-202ENST00000351808 HIST1H4AP62805 103 aaKnown RBP9.89□□□□□ -0.83
IFT88-202ENST00000351808 NDPQ00604 133 aa9.89□□□□□ -0.83
IFT88-202ENST00000351808 KLRB1Q12918 225 aa9.89□□□□□ -0.83
IFT88-202ENST00000351808 DAZ2Q13117 558 aaKnown RBP9.89□□□□□ -0.83
IFT88-202ENST00000351808 DAZ4Q86SG3 579 aaKnown RBP9.89□□□□□ -0.83
IFT88-202ENST00000351808 DAZ1Q9NQZ3 744 aaKnown RBP9.89□□□□□ -0.83
IFT88-202ENST00000351808 DAZ3Q9NR90 486 aaKnown RBP9.89□□□□□ -0.83
IFT88-202ENST00000351808 CLPSL1A2RUU4 121 aa9.89□□□□□ -0.83
IFT88-202ENST00000351808 LINC00315P59091 139 aa9.89□□□□□ -0.83
IFT88-202ENST00000351808 TMEM61Q8N0U2 210 aa9.89□□□□□ -0.83
IFT88-202ENST00000351808 RNF5Q99942 180 aa9.89□□□□□ -0.83
IFT88-202ENST00000351808 PCNX1Q96RV3 2341 aa9.88□□□□□ -0.83
IFT88-202ENST00000351808 F5H697 171 aa9.88□□□□□ -0.83
IFT88-202ENST00000351808 PEMTQ9UBM1 199 aa9.88□□□□□ -0.83
IFT88-202ENST00000351808 SUMO4Q6EEV6 95 aa9.88□□□□□ -0.83
IFT88-202ENST00000351808 SEM1Q6ZVN7 128 aa9.88□□□□□ -0.83
IFT88-202ENST00000351808 IGHV4OR15-8A0A075B7B6 117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms