RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 FOXF2Q12947 444 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 DEFB114Q30KQ6 69 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 Q9H8V8 135 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 CCL24O00175 119 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 SPAG11BQ08648 103 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 IGKV1-9A0A0C4DH69 117 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 FOXQ1Q9C009 403 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 MYLKQ15746 1914 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 TRGV4A0A0C4DH28 118 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 ZNF22P17026 224 aaPredicted RBP2.91□□□□□ -1.94
SYNE2-202ENST00000344113 NOTCH2NLQ7Z3S9 236 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 IGKV1-5P01602 117 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 FRMD6-AS1P0C7T7 363 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 FOCADQ5VW36 1801 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 NFE4Q86UQ8 179 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 IGHV3-43A0A0B4J1X8 118 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 IGHV3-43DP0DP04 118 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 CD24P25063 80 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.9□□□□□ -1.94
SYNE2-202ENST00000344113 H7C423 109 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 CCKP06307 115 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 LINC00269Q8N2A0 174 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 ZNF784Q8NCA9 323 aaPredicted RBP2.9□□□□□ -1.94
SYNE2-202ENST00000344113 WFDC10AQ9H1F0 79 aa2.9□□□□□ -1.94
SYNE2-202ENST00000344113 C14orf178Q8N769 122 aaPredicted RBP2.9□□□□□ -1.95
SYNE2-202ENST00000344113 C17orf98A8MV24 154 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 SIPA1L3O60292 1781 aaPredicted RBP2.9□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV4OR15-8A0A075B7B6 117 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 A0A087WW49 117 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV1D-33P01593 117 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV1-33P01594 117 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 ZNF134P52741 427 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 DEFB112Q30KQ8 113 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 C2orf16Q68DN1 1984 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV3OR2-268A0A0C4DH90 116 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 TRGV3P03979 118 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 PLA2G2FQ9BZM2 168 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV1D-13A0A0B4J2D9 117 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV1-13P0DP09 117 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.9□□□□□ -1.95
SYNE2-202ENST00000344113 RPP25Q9BUL9 199 aaKnown RBP2.9□□□□□ -1.95
SYNE2-202ENST00000344113 INSL3P51460 131 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 H3BUA1 57 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 NDUFA4O00483 81 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 MYCNOSP40205 109 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 BPESC1Q9GZL8 116 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 PHIPQ8WWQ0 1821 aa2.9□□□□□ -1.95
SYNE2-202ENST00000344113 A0A087WWL8 130 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 PRB4P10163 310 aaPredicted RBP2.89□□□□□ -1.95
SYNE2-202ENST00000344113 HCG22E2RYF7 251 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 DEFB133Q30KQ1 61 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 ODF3Q96PU9 254 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 SPTY2D1-AS1A0A0U1RR47 76 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 Q0VFX4 171 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 KLF14Q8TD94 323 aaPredicted RBP2.89□□□□□ -1.95
SYNE2-202ENST00000344113 RGPD3A6NKT7 1758 aaPredicted RBP2.89□□□□□ -1.95
SYNE2-202ENST00000344113 RGPD4Q7Z3J3 1758 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 C5orf63A6NC05 138 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 PRR25Q96S07 402 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 PTPRDP23468 1912 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 SPAG11AQ6PDA7 123 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV3D-20A0A0C4DH25 116 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 IL17DQ8TAD2 202 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 ETDCA0A1B0GVM5 59 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 LINC00574Q9H8X3 128 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 SPTBN4Q9H254 2564 aa2.89□□□□□ -1.95
SYNE2-202ENST00000344113 COX7B2Q8TF08 81 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IBA57-AS1B1ANH7 110 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 Q1T7F1 81 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 ZNF71Q9NQZ8 489 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-202ENST00000344113 APOC4P55056 127 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 NEXN-AS1Q8NBZ9 246 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 A0A0C4DFX4 3053 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 ITGBL1O95965 494 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-202ENST00000344113 RPL39P5Q59GN2 51 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 LOC100131303A0A0U1RQF7 123 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 C16orf47Q6ZP98 133 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV3-64DA0A0J9YX35 117 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 A0A0J9YY99 117 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 LCA10Q71F78 164 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 ABCA12Q86UK0 2595 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV3-30P01768 117 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV3-30-5P0DP03 117 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 GGNQ86UU5 652 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 MRPS12O15235 138 aaKnown RBP2.88□□□□□ -1.95
SYNE2-202ENST00000344113 KRTAP27-1Q3LI81 207 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV3-15A0A0B4J1V0 119 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV3-11P04433 115 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 DHRS4-AS1Q9P1J3 65 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 TRBV6-5A0A0K0K1A5 114 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 TMEM178BH3BS89 294 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 SMAD5-AS1Q9Y6J3 95 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IGHV3-30-3P0DP02 117 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 FGFBP3Q8TAT2 258 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV2-40A0A087WW87 121 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-202ENST00000344113 IGKV2D-40P01614 121 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-202ENST00000344113 COL11A2P13942 1736 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-202ENST00000344113 ARTNQ5T4W7 220 aa2.88□□□□□ -1.95
SYNE2-202ENST00000344113 Q96MF0 132 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms