RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 TMEM75Q8N9X5 138 aa9.67□□□□□ -0.86
DFFB-202ENST00000339350 TRBV7-7A0A0K0K1E9 115 aa9.67□□□□□ -0.86
DFFB-202ENST00000339350 H3BMM0 161 aa9.67□□□□□ -0.86
DFFB-202ENST00000339350 CFC1BP0CG36 223 aa9.67□□□□□ -0.86
DFFB-202ENST00000339350 CFC1P0CG37 223 aa9.67□□□□□ -0.86
DFFB-202ENST00000339350 UBE2WQ96B02 151 aa9.67□□□□□ -0.86
DFFB-202ENST00000339350 CUBNO60494 3623 aa9.67□□□□□ -0.86
DFFB-202ENST00000339350 K7EIM0 57 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 IGLV1-47P01700 117 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 HLA-DMBP28068 263 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 VKORC1Q9BQB6 163 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 FAM208BQ5VWN6 2430 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 IGHV4-39P01824 125 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 ZNF491Q8N8L2 437 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 hADV29S1A0JD25 119 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 OVOL1O14753 267 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 GATA1P15976 413 aaPredicted RBP9.66□□□□□ -0.86
DFFB-202ENST00000339350 CDSNQ15517 529 aa9.66□□□□□ -0.86
DFFB-202ENST00000339350 ZNF256Q9Y2P7 627 aaPredicted RBP9.66□□□□□ -0.86
DFFB-202ENST00000339350 SHANK2-AS3Q9BTD1 123 aa9.65□□□□□ -0.86
DFFB-202ENST00000339350 CYSTM1Q9H1C7 97 aa9.65□□□□□ -0.86
DFFB-202ENST00000339350 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
DFFB-202ENST00000339350 ELANEP08246 267 aa9.65□□□□□ -0.86
DFFB-202ENST00000339350 ZNF22P17026 224 aaPredicted RBP9.65□□□□□ -0.86
DFFB-202ENST00000339350 RNF152Q8N8N0 203 aa9.65□□□□□ -0.86
DFFB-202ENST00000339350 IL17DQ8TAD2 202 aa9.65□□□□□ -0.86
DFFB-202ENST00000339350 MYOZ3Q8TDC0 251 aa9.65□□□□□ -0.86
DFFB-202ENST00000339350 TRACP01848 142 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 PLNP26678 52 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 RPL13AP40429 203 aaKnown RBP9.64□□□□□ -0.87
DFFB-202ENST00000339350 EBI3Q14213 229 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 C1orf195Q5TG92 126 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 H3BRN7 92 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 SH2D1AO60880 128 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 SPANXCQ9NY87 97 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 TMEM14CQ9P0S9 112 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 USP9XQ93008 2570 aaPredicted RBP9.64□□□□□ -0.87
DFFB-202ENST00000339350 A0A0U1RQV1 116 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 A0A0U1RRA0 63 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 SLC25A16P16260 332 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 LINC01620Q4KN68 170 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 PVRIGQ6DKI7 326 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 PRO1854Q9UHT4 67 aa9.64□□□□□ -0.87
DFFB-202ENST00000339350 USP9YO00507 2555 aaPredicted RBP9.63□□□□□ -0.87
DFFB-202ENST00000339350 TRAV41A0A0B4J266 112 aa9.63□□□□□ -0.87
DFFB-202ENST00000339350 HOXB4P17483 251 aaPredicted RBP9.63□□□□□ -0.87
DFFB-202ENST00000339350 FAM19A4Q96LR4 140 aa9.63□□□□□ -0.87
DFFB-202ENST00000339350 IGHV3OR16-13A0A075B7E8 117 aa9.63□□□□□ -0.87
DFFB-202ENST00000339350 IGHV3-74A0A0B4J1X5 117 aa9.63□□□□□ -0.87
DFFB-202ENST00000339350 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
DFFB-202ENST00000339350 C8orf31Q8N9H6 132 aa9.63□□□□□ -0.87
DFFB-202ENST00000339350 BEX4Q9NWD9 120 aaPredicted RBP9.63□□□□□ -0.87
DFFB-202ENST00000339350 NXT2Q9NPJ8 142 aaKnown RBP9.62□□□□□ -0.87
DFFB-202ENST00000339350 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.62□□□□□ -0.871e-7■■■■□ 25.5
DFFB-202ENST00000339350 LRRK2Q5S007 2527 aa9.62□□□□□ -0.87
DFFB-202ENST00000339350 EGR2P11161 476 aaPredicted RBP9.62□□□□□ -0.87
DFFB-202ENST00000339350 PFN2P35080 140 aa9.62□□□□□ -0.87
DFFB-202ENST00000339350 KAAG1Q9UBP8 84 aa9.62□□□□□ -0.87
DFFB-202ENST00000339350 IGSF10Q6WRI0 2623 aa9.62□□□□□ -0.87
DFFB-202ENST00000339350 IGHV3-66A0A0C4DH42 116 aa9.61□□□□□ -0.87
DFFB-202ENST00000339350 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.61□□□□□ -0.87
DFFB-202ENST00000339350 HERVK_113P61574 105 aa9.61□□□□□ -0.87
DFFB-202ENST00000339350 F8VRH5 84 aa9.61□□□□□ -0.87
DFFB-202ENST00000339350 COX7CP15954 63 aa9.61□□□□□ -0.87
DFFB-202ENST00000339350 C10orf105Q8TEF2 133 aa9.61□□□□□ -0.87
DFFB-202ENST00000339350 ERCC8Q13216 396 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 C2orf82Q6UX34 121 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 Q6ZS46 218 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 DTX2Q86UW9 622 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 Q8N8P6 123 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 RNF185Q96GF1 192 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 ZANQ9Y493 2812 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 EPG5Q9HCE0 2579 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 H7C1H1 209 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 NDPQ00604 133 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 KLK15Q9H2R5 256 aa9.6□□□□□ -0.87
DFFB-202ENST00000339350 J3QQQ9 107 aa9.59□□□□□ -0.87
DFFB-202ENST00000339350 K7ENP7 123 aa9.59□□□□□ -0.87
DFFB-202ENST00000339350 NBR2O15453 112 aa9.59□□□□□ -0.87
DFFB-202ENST00000339350 C2orf48Q96LS8 159 aa9.59□□□□□ -0.87
DFFB-202ENST00000339350 IGHV3-49A0A0A0MS15 119 aa9.59□□□□□ -0.87
DFFB-202ENST00000339350 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
DFFB-202ENST00000339350 LINC01546A6NGU7 62 aa9.59□□□□□ -0.87
DFFB-202ENST00000339350 ATXN8Q156A1 80 aa9.59□□□□□ -0.87
DFFB-202ENST00000339350 TRBV10-2A0A0K0K1G8 114 aa9.58□□□□□ -0.88
DFFB-202ENST00000339350 CRYGAP11844 174 aa9.58□□□□□ -0.88
DFFB-202ENST00000339350 Q1RN00 199 aa9.58□□□□□ -0.88
DFFB-202ENST00000339350 RNF182Q8N6D2 247 aa9.58□□□□□ -0.88
DFFB-202ENST00000339350 FANCD2OSQ96PS1 177 aa9.58□□□□□ -0.88
DFFB-202ENST00000339350 TMEM258P61165 79 aa9.58□□□□□ -0.88
DFFB-202ENST00000339350 TMEM170BQ5T4T1 132 aa9.58□□□□□ -0.88
DFFB-202ENST00000339350 CSPG4Q6UVK1 2322 aa9.57□□□□□ -0.88
DFFB-202ENST00000339350 A0A0J9YY99 117 aa9.57□□□□□ -0.88
DFFB-202ENST00000339350 CCL21O00585 134 aa9.57□□□□□ -0.88
DFFB-202ENST00000339350 IGHV3-30P01768 117 aa9.57□□□□□ -0.88
DFFB-202ENST00000339350 IGHV3-30-5P0DP03 117 aa9.57□□□□□ -0.88
DFFB-202ENST00000339350 PRR25Q96S07 402 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms