RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 BTF3P20290 206 aaKnown RBP14.16□□□□□ -0.14
RAB28-203ENST00000338176 SFRP2Q96HF1 295 aa14.16□□□□□ -0.14
RAB28-203ENST00000338176 LINC00694P0DN24 101 aa14.15□□□□□ -0.14
RAB28-203ENST00000338176 OR10J3Q5JRS4 329 aa14.15□□□□□ -0.14
RAB28-203ENST00000338176 OR10AG1Q8NH19 301 aa14.15□□□□□ -0.14
RAB28-203ENST00000338176 APOBP04114 4563 aaKnown RBP14.15□□□□□ -0.14
RAB28-203ENST00000338176 TRAV9-2A0A087WT02 112 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 IGHV3-38A0A0C4DH36 116 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 A0A1B0GVG6 124 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 CENPWQ5EE01 88 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 Q8N3U1 123 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 GTSF1LQ9H1H1 148 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 MSRB1Q9NZV6 116 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 IGLV2-8P01709 118 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 SSTP61278 116 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 ZFP82Q8N141 532 aa14.14□□□□□ -0.15
RAB28-203ENST00000338176 PCLOQ9Y6V0 5065 aa14.13□□□□□ -0.15
RAB28-203ENST00000338176 TEX46H3BTG2 121 aa14.13□□□□□ -0.15
RAB28-203ENST00000338176 IGHV3-30P01768 117 aa14.13□□□□□ -0.15
RAB28-203ENST00000338176 IGHV3-33P01772 117 aa14.13□□□□□ -0.15
RAB28-203ENST00000338176 IGHV3-30-3P0DP02 117 aa14.13□□□□□ -0.15
RAB28-203ENST00000338176 IGHV3-30-5P0DP03 117 aa14.13□□□□□ -0.15
RAB28-203ENST00000338176 MEF2BQ02080 365 aaPredicted RBP14.12□□□□□ -0.15
RAB28-203ENST00000338176 LELP1Q5T871 98 aa14.12□□□□□ -0.15
RAB28-203ENST00000338176 TRAV8-6A0A0B4J262 113 aa14.11□□□□□ -0.15
RAB28-203ENST00000338176 RHODO00212 210 aa14.11□□□□□ -0.15
RAB28-203ENST00000338176 GZMBP10144 247 aa14.11□□□□□ -0.15
RAB28-203ENST00000338176 BCL2P10415 239 aa14.11□□□□□ -0.15
RAB28-203ENST00000338176 NKX2-5P52952 324 aaPredicted RBP14.11□□□□□ -0.15
RAB28-203ENST00000338176 LINC01556Q5JQF7 62 aa14.11□□□□□ -0.15
RAB28-203ENST00000338176 ALKAL2Q6UX46 152 aa14.11□□□□□ -0.15
RAB28-203ENST00000338176 TRBV20OR9-2A0A075B6H5 130 aa14.1□□□□□ -0.15
RAB28-203ENST00000338176 KRTAP17-1Q9BYP8 105 aa14.1□□□□□ -0.15
RAB28-203ENST00000338176 MED9Q9NWA0 146 aa14.1□□□□□ -0.15
RAB28-203ENST00000338176 SNAI2O43623 268 aa14.09□□□□□ -0.15
RAB28-203ENST00000338176 CXCL1P09341 107 aa14.09□□□□□ -0.15
RAB28-203ENST00000338176 NFE4Q86UQ8 179 aa14.09□□□□□ -0.15
RAB28-203ENST00000338176 IFNA1P01562 189 aa14.09□□□□□ -0.15
RAB28-203ENST00000338176 SSBP4Q9BWG4 385 aaPredicted RBP14.09□□□□□ -0.15
RAB28-203ENST00000338176 BOLA1Q9Y3E2 137 aa14.09□□□□□ -0.15
RAB28-203ENST00000338176 VAX2Q9UIW0 290 aa14.08□□□□□ -0.16
RAB28-203ENST00000338176 RBFOX3A6NFN3 312 aa14.07□□□□□ -0.16
RAB28-203ENST00000338176 K7EP13 123 aa14.07□□□□□ -0.16
RAB28-203ENST00000338176 PDE6DO43924 150 aa14.07□□□□□ -0.16
RAB28-203ENST00000338176 GNG4P50150 75 aa14.07□□□□□ -0.16
RAB28-203ENST00000338176 C10orf126Q8N4M7 172 aa14.07□□□□□ -0.16
RAB28-203ENST00000338176 Q9HAA7 133 aa14.07□□□□□ -0.16
RAB28-203ENST00000338176 A0A087WTM6 91 aa14.06□□□□□ -0.16
RAB28-203ENST00000338176 ERVFC1-1P60608 527 aa14.06□□□□□ -0.16
RAB28-203ENST00000338176 C19orf71A6NCJ1 209 aa14.06□□□□□ -0.16
RAB28-203ENST00000338176 IBA57-AS1B1ANH7 110 aa14.06□□□□□ -0.16
RAB28-203ENST00000338176 OR5AL1P0C617 328 aa14.06□□□□□ -0.16
RAB28-203ENST00000338176 SPANXN1Q5VSR9 72 aa14.06□□□□□ -0.16
RAB28-203ENST00000338176 OR2D3Q8NGH3 330 aa14.05□□□□□ -0.16
RAB28-203ENST00000338176 TPPP3Q9BW30 176 aa14.05□□□□□ -0.16
RAB28-203ENST00000338176 ZNF56Q15929 161 aa14.04□□□□□ -0.16
RAB28-203ENST00000338176 ABCA13Q86UQ4 5058 aa14.04□□□□□ -0.16
RAB28-203ENST00000338176 DAZAP1Q96EP5 407 aaKnown RBP14.04□□□□□ -0.16
RAB28-203ENST00000338176 DAZ4Q86SG3 579 aaKnown RBP14.03□□□□□ -0.16
RAB28-203ENST00000338176 KRTAP4-5Q9BYR2 181 aa14.03□□□□□ -0.16
RAB28-203ENST00000338176 DAZ3Q9NR90 486 aaKnown RBP14.03□□□□□ -0.16
RAB28-203ENST00000338176 IGLC6P0CF74 106 aa14.02□□□□□ -0.16
RAB28-203ENST00000338176 RAB4BP61018 213 aa14.02□□□□□ -0.16
RAB28-203ENST00000338176 UBE2D3P61077 147 aa14.01□□□□□ -0.17
RAB28-203ENST00000338176 UBE2D2P62837 147 aa14.01□□□□□ -0.17
RAB28-203ENST00000338176 FER1L6-AS1Q8NA97 138 aa14.01□□□□□ -0.17
RAB28-203ENST00000338176 NEXN-AS1Q8NBZ9 246 aa14.01□□□□□ -0.17
RAB28-203ENST00000338176 KIF25-AS1Q9Y6Z4 181 aa14.01□□□□□ -0.17
RAB28-203ENST00000338176 EREGO14944 169 aa14.01□□□□□ -0.17
RAB28-203ENST00000338176 RPL36AP83881 106 aaKnown RBP14.01□□□□□ -0.17
RAB28-203ENST00000338176 RPL36ALQ969Q0 106 aaKnown RBP14.01□□□□□ -0.17
RAB28-203ENST00000338176 TRBV7-3A0A075B6L6 115 aa14□□□□□ -0.17
RAB28-203ENST00000338176 TRBV10-1A0A0K0K1A3 114 aa14□□□□□ -0.17
RAB28-203ENST00000338176 F5H697 171 aa14□□□□□ -0.17
RAB28-203ENST00000338176 K7EN84 100 aa14□□□□□ -0.17
RAB28-203ENST00000338176 P01737 135 aa14□□□□□ -0.17
RAB28-203ENST00000338176 SMIM12Q96EX1 92 aa14□□□□□ -0.17
RAB28-203ENST00000338176 DNAJC30Q96LL9 226 aa14□□□□□ -0.17
RAB28-203ENST00000338176 LRCOL1A6NCL2 159 aa13.99□□□□□ -0.17
RAB28-203ENST00000338176 PSCAO43653 123 aa13.99□□□□□ -0.17
RAB28-203ENST00000338176 CDK2AP2O75956 126 aa13.99□□□□□ -0.17
RAB28-203ENST00000338176 BLOC1S1P78537 153 aa13.99□□□□□ -0.17
RAB28-203ENST00000338176 NUDT10Q8NFP7 164 aa13.99□□□□□ -0.17
RAB28-203ENST00000338176 NUDT11Q96G61 164 aa13.99□□□□□ -0.17
RAB28-203ENST00000338176 A0A087WWC5 75 aa13.99□□□□□ -0.17
RAB28-203ENST00000338176 TAGLN2P37802 199 aaKnown RBP13.99□□□□□ -0.17
RAB28-203ENST00000338176 RPS20P60866 119 aaKnown RBP13.99□□□□□ -0.17
RAB28-203ENST00000338176 OCC1Q8TAD7 63 aa13.99□□□□□ -0.17
RAB28-203ENST00000338176 OR10G8Q8NGN5 311 aa13.98□□□□□ -0.17
RAB28-203ENST00000338176 LYPD6BQ8NI32 183 aa13.98□□□□□ -0.17
RAB28-203ENST00000338176 RNASE7Q9H1E1 156 aaKnown RBP13.98□□□□□ -0.17
RAB28-203ENST00000338176 PGPEP1Q9NXJ5 209 aa13.98□□□□□ -0.17
RAB28-203ENST00000338176 LYZL1Q6UWQ5 148 aa13.97□□□□□ -0.17
RAB28-203ENST00000338176 NIT1Q86X76 327 aa13.97□□□□□ -0.17
RAB28-203ENST00000338176 AP1S3Q96PC3 154 aa13.97□□□□□ -0.17
RAB28-203ENST00000338176 MGPP08493 103 aa13.96□□□□□ -0.18
RAB28-203ENST00000338176 SMIM17P0DL12 118 aa13.96□□□□□ -0.18
RAB28-203ENST00000338176 CEBPGP53567 150 aa13.95□□□□□ -0.18
RAB28-203ENST00000338176 WFDC2Q14508 124 aa13.95□□□□□ -0.18
RAB28-203ENST00000338176 LAGE3Q14657 143 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms