RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 IGKV3D-20A0A0C4DH25 116 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 LOC101059948A0A1B0GTJ6 334 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 CFAP126Q5VTH2 177 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 COX7B2Q8TF08 81 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 CT62P0C5K7 136 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 SND1-IT1Q9HBX3 110 aa4.77□□□□□ -1.65
CDC42BPA-201ENST00000334218 TRGV4A0A0C4DH28 118 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 FXYD2P54710 66 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 Q6ZT83 130 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 STATHP02808 62 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 TMEM14EPQ6UXP3 125 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 LYPD6Q86Y78 171 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 PRCDQ00LT1 54 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 DEFB109BQ30KR1 87 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 ZIC4Q8N9L1 334 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 FAM27BQ5VT28 67 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGHV7-81A0A0B4J1V7 117 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 MIAQ16674 131 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 C1orf158Q8N1D5 194 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGKV3D-15A0A087WSY6 115 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGKV3-15P01624 115 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGHV5-10-1A0A0J9YXX1 117 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 GATA3P23771 443 aa4.76□□□□□ -1.65
CDC42BPA-201ENST00000334218 TRBV7-1A0A0A6YYK4 115 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 MINOS1Q5TGZ0 78 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 ADAMTS20P59510 1910 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 DEFB110Q30KQ9 67 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 LINC00208Q96KT6 92 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGLV7-46A0A075B6I9 117 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 PSCAO43653 123 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 CPAMD8Q8IZJ3 1885 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 NCR3O14931 201 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 MST1LQ2TV78 715 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 SPACA3Q8IXA5 215 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGHV3-30P01768 117 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGHV3-30-5P0DP03 117 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 COL8A2P25067 703 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 WFDC5Q8TCV5 224 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 DIRC1Q969H9 104 aa4.75□□□□□ -1.65
CDC42BPA-201ENST00000334218 LINC01554Q52M75 96 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 TRAV10A0A0B4J240 114 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 RPP25LQ8N5L8 163 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 PSPNO60542 156 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 SEM1Q6ZVN7 128 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 Q86TA4 180 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 XCL1P47992 114 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 PRR25Q96S07 402 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 XCL2Q9UBD3 114 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 SPAARA0A1B0GVQ0 90 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 WBP1Q96G27 269 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 ETDCA0A1B0GVM5 59 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 TCRBV5S1A1TA0A578 114 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 PLA2G2AP14555 144 aa4.74□□□□□ -1.65
CDC42BPA-201ENST00000334218 CFHR3Q02985 330 aa4.73□□□□□ -1.65
CDC42BPA-201ENST00000334218 RSPO4Q2I0M5 234 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-201ENST00000334218 NDUFA4L2Q9NRX3 87 aa4.73□□□□□ -1.65
CDC42BPA-201ENST00000334218 MGAMO43451 1857 aa4.73□□□□□ -1.65
CDC42BPA-201ENST00000334218 HILS1P60008 231 aa4.73□□□□□ -1.65
CDC42BPA-201ENST00000334218 ZNF837Q96EG3 531 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGHV1-3A0A0C4DH29 117 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 TRBV10-1A0A0K0K1A3 114 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 ZGLP1P0C6A0 271 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 TREML4Q6UXN2 200 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 Q6ZQY7 126 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGLV3-19P01714 112 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 MDS2Q8NDY4 140 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 SPRY3O43610 288 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 TRBV5-3A0A0A0MS03 114 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGHV3-43A0A0B4J1X8 118 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 SHISA3A0PJX4 238 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 IGHV3-43DP0DP04 118 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 TMEM105Q8N8V8 129 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 DEFB108BQ8NET1 73 aa4.72□□□□□ -1.65
CDC42BPA-201ENST00000334218 H0Y9J4 135 aa4.71□□□□□ -1.65
CDC42BPA-201ENST00000334218 DKK1O94907 266 aa4.71□□□□□ -1.65
CDC42BPA-201ENST00000334218 UFSP1Q6NVU6 142 aa4.71□□□□□ -1.65
CDC42BPA-201ENST00000334218 HCP5Q6MZN7 132 aa4.71□□□□□ -1.65
CDC42BPA-201ENST00000334218 NEU4Q8WWR8 484 aaPredicted RBP4.71□□□□□ -1.65
CDC42BPA-201ENST00000334218 Q9H8V8 135 aa4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 UQCR11O14957 56 aa4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGLV11-55A0A075B6I3 123 aa4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 A0A0J9YY99 117 aa4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 COX14Q96I36 57 aa4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 FGF23Q9GZV9 251 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 LECT2O14960 151 aa4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 FHL5Q5TD97 284 aa4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 B9D2Q9BPU9 175 aa4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 CDPF1Q6NVV7 123 aa4.71□□□□□ -1.66
CDC42BPA-201ENST00000334218 SONP18583 2426 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 HCG22E2RYF7 251 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 C9orf116Q5BN46 136 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 TRBV6-5A0A0K0K1A5 114 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 EPOPA6NHQ4 379 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 LINC00205P59089 165 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 ATP6V0E1O15342 81 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 CCKP06307 115 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 TRBV6-6A0A0A6YYG2 114 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 USMG5Q96IX5 58 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGHV1-18A0A0C4DH31 117 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms