RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 PRO0461Q9UI25 63 aa13.39□□□□□ -0.27
TRIM50-201ENST00000333149 H3BMG7 143 aa13.39□□□□□ -0.27
TRIM50-201ENST00000333149 LGALS9O00182 355 aa13.39□□□□□ -0.27
TRIM50-201ENST00000333149 PMVKQ15126 192 aa13.39□□□□□ -0.27
TRIM50-201ENST00000333149 TP53TG1Q9Y2A0 90 aa13.39□□□□□ -0.27
TRIM50-201ENST00000333149 CENPEQ02224 2701 aa13.38□□□□□ -0.27
TRIM50-201ENST00000333149 TRBV27A0A0K0K1C4 114 aa13.38□□□□□ -0.27
TRIM50-201ENST00000333149 C11orf86A6NJI1 115 aa13.38□□□□□ -0.27
TRIM50-201ENST00000333149 UBE2D1P51668 147 aa13.38□□□□□ -0.27
TRIM50-201ENST00000333149 TMEM238LA0A1B0GVL6 79 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 A6NJY4 79 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 MSMBP08118 114 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 C9orf85Q96MD7 179 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 KIR2DL4Q99706 377 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 JPT2Q9H910 190 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 SRD5A1P18405 259 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 SCGB2A2Q13296 93 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 GAGE13Q4V321 117 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 CLEC2AQ6UVW9 174 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 CCL19Q99731 98 aa13.37□□□□□ -0.27
TRIM50-201ENST00000333149 PLA2G2AP14555 144 aa13.36□□□□□ -0.27
TRIM50-201ENST00000333149 EDN2P20800 178 aa13.36□□□□□ -0.27
TRIM50-201ENST00000333149 HERVK_113P61574 105 aa13.36□□□□□ -0.27
TRIM50-201ENST00000333149 PLEKHB2Q96CS7 222 aa13.36□□□□□ -0.27
TRIM50-201ENST00000333149 CD7P09564 240 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 PSMB8P28062 276 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 IGHV4-30-2A0A087WSY4 118 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 TRAV12-3A0A0B4J271 114 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 IGHV3-16A0A0C4DH30 117 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 SDHAF1A6NFY7 115 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 TMEM238C9JI98 176 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 J3QR89 54 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 CD300EQ496F6 205 aaPredicted RBP13.35□□□□□ -0.27
TRIM50-201ENST00000333149 AMTNQ6UX39 209 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 SCGB1D4Q6XE38 83 aa13.35□□□□□ -0.27
TRIM50-201ENST00000333149 CELSR2Q9HCU4 2923 aa13.34□□□□□ -0.27
TRIM50-201ENST00000333149 HELZ2Q9BYK8 2649 aaKnown RBP13.34□□□□□ -0.27
TRIM50-201ENST00000333149 TMEM89A2RUT3 159 aa13.34□□□□□ -0.27
TRIM50-201ENST00000333149 J3QKU1 62 aa13.34□□□□□ -0.27
TRIM50-201ENST00000333149 ZNF876PQ49A33 203 aa13.34□□□□□ -0.27
TRIM50-201ENST00000333149 A0A0J9YY99 117 aa13.34□□□□□ -0.27
TRIM50-201ENST00000333149 KLHL30-AS1Q8NEE0 82 aa13.34□□□□□ -0.27
TRIM50-201ENST00000333149 CSMD2Q7Z408 3487 aa13.33□□□□□ -0.28
TRIM50-201ENST00000333149 A0A087WWL8 130 aa13.33□□□□□ -0.28
TRIM50-201ENST00000333149 A0A0J9YX75 114 aa13.33□□□□□ -0.28
TRIM50-201ENST00000333149 RPL39P62891 51 aaKnown RBP13.33□□□□□ -0.28
TRIM50-201ENST00000333149 SRSF9Q13242 221 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRIM50-201ENST00000333149 PGPEP1Q9NXJ5 209 aa13.33□□□□□ -0.28
TRIM50-201ENST00000333149 F5H697 171 aa13.32□□□□□ -0.28
TRIM50-201ENST00000333149 RNF152Q8N8N0 203 aa13.32□□□□□ -0.28
TRIM50-201ENST00000333149 USP9YO00507 2555 aaPredicted RBP13.32□□□□□ -0.28
TRIM50-201ENST00000333149 SPG11Q96JI7 2443 aa13.32□□□□□ -0.28
TRIM50-201ENST00000333149 M0QY20 66 aa13.32□□□□□ -0.28
TRIM50-201ENST00000333149 AVPP01185 164 aa13.32□□□□□ -0.28
TRIM50-201ENST00000333149 ATP5J2P56134 94 aa13.32□□□□□ -0.28
TRIM50-201ENST00000333149 ETDBQ3ZM63 59 aa13.32□□□□□ -0.28
TRIM50-201ENST00000333149 K7EQG2 157 aa13.31□□□□□ -0.28
TRIM50-201ENST00000333149 RHOHQ15669 191 aa13.31□□□□□ -0.28
TRIM50-201ENST00000333149 NSUN5P1Q3KNT7 163 aa13.31□□□□□ -0.28
TRIM50-201ENST00000333149 SH2D6Q7Z4S9 175 aa13.31□□□□□ -0.28
TRIM50-201ENST00000333149 SYT8Q8NBV8 401 aa13.31□□□□□ -0.28
TRIM50-201ENST00000333149 SPAG8Q99932 426 aaPredicted RBP13.31□□□□□ -0.28
TRIM50-201ENST00000333149 MRPL16Q9NX20 251 aaKnown RBP13.31□□□□□ -0.28
TRIM50-201ENST00000333149 VPS13CQ709C8 3753 aa13.31□□□□□ -0.28
TRIM50-201ENST00000333149 ZFHX3Q15911 3703 aa13.31□□□□□ -0.28
TRIM50-201ENST00000333149 DOPEY2Q9Y3R5 2298 aa13.31□□□□□ -0.28
TRIM50-201ENST00000333149 B4DSR2 109 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 GATA3P23771 443 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 NFE4Q86UQ8 179 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 SLC25A29Q8N8R3 303 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 ZNRF2Q8NHG8 242 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 SCGB1A1P11684 91 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 UBE2D3P61077 147 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 UBE2D2P62837 147 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 WFDC12Q8WWY7 111 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 SPATA25Q9BR10 227 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 MDFICQ9P1T7 246 aa13.3□□□□□ -0.28
TRIM50-201ENST00000333149 GAGE12HA6NDE8 117 aa13.29□□□□□ -0.28
TRIM50-201ENST00000333149 SNRPD3P62318 126 aaKnown RBP13.29□□□□□ -0.28
TRIM50-201ENST00000333149 AMELXQ99217 191 aa13.29□□□□□ -0.28
TRIM50-201ENST00000333149 SIGMAR1Q99720 223 aa13.29□□□□□ -0.28
TRIM50-201ENST00000333149 TSPAN13O95857 204 aa13.29□□□□□ -0.28
TRIM50-201ENST00000333149 ZNF688P0C7X2 276 aa13.29□□□□□ -0.28
TRIM50-201ENST00000333149 Q8N1Y9 231 aa13.29□□□□□ -0.28
TRIM50-201ENST00000333149 DLX4Q92988 240 aaPredicted RBP13.29□□□□□ -0.28
TRIM50-201ENST00000333149 MAP1AP78559 2803 aaPredicted RBP13.28□□□□□ -0.28
TRIM50-201ENST00000333149 NBPF19A0A087WUL8 3843 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 GCN1Q92616 2671 aaKnown RBP13.28□□□□□ -0.28
TRIM50-201ENST00000333149 IGHV1OR15-1A0A075B7D0 117 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 IGHV3-30P01768 117 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 IGHV3-30-5P0DP03 117 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 EMP1P54849 157 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 TSPEAR-AS2P59090 65 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 TMEM95Q3KNT9 176 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 CFAP126Q5VTH2 177 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 TRPT1Q86TN4 253 aaKnown RBP13.28□□□□□ -0.28
TRIM50-201ENST00000333149 NDUFA11Q86Y39 141 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 ATP6V0E2Q8NHE4 81 aa13.28□□□□□ -0.28
TRIM50-201ENST00000333149 ZNF256Q9Y2P7 627 aaPredicted RBP13.28□□□□□ -0.28
TRIM50-201ENST00000333149 TSSC4Q9Y5U2 329 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms