RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 DYNAPQ8N1N2 210 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 ETDCA0A1B0GVM5 59 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 A4D1N5 150 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 MSRB1Q9NZV6 116 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 SRSF2Q01130 221 aaKnown RBP6.23□□□□□ -1.41
CIITA-201ENST00000324288 H3BRN7 92 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 APRG1Q8IVJ8 170 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 SLX1AQ9BQ83 275 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 MLST8Q9BVC4 326 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 TP73-AS1Q9UF72 201 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 ADAMTS20P59510 1910 aa6.23□□□□□ -1.41
CIITA-201ENST00000324288 SIVA1O15304 175 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 LTAP01374 205 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 RMI2Q96E14 147 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 PLA2G2EQ9NZK7 142 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 TIRAPP58753 221 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 FOXI2Q6ZQN5 318 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 TMEM190Q8WZ59 177 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 CHD8Q9HCK8 2581 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 FAM231DQ6ZW35 169 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 PRR25Q96S07 402 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 DEFB4AO15263 64 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 HERVK_113P63121 156 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 Q6ZR03 302 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 VSIG2Q96IQ7 327 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 NDUFA4L2Q9NRX3 87 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 E9PQ18 207 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 RHOHQ15669 191 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 SND1-IT1Q9HBX3 110 aa6.22□□□□□ -1.41
CIITA-201ENST00000324288 BUB3O43684 328 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 C17orf58Q2M2W7 97 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 ZFP2Q6ZN57 461 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 FASNP49327 2511 aaKnown RBP6.21□□□□□ -1.42
CIITA-201ENST00000324288 IGHV4OR15-8A0A075B7B6 117 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 A0A087WW49 117 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 FRMD6-AS1P0C7T7 363 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 IGHV7-4-1A0A0J9YVY3 117 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 SLURP1P55000 103 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 ANKRD11Q6UB99 2663 aaPredicted RBP6.21□□□□□ -1.42
CIITA-201ENST00000324288 GYPEP15421 78 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 LINC01545Q5VT33 79 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 WFDC11Q8NEX6 87 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 PYGO2Q9BRQ0 406 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 SPANXDQ9BXN6 97 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 ZMAT4Q9H898 229 aa6.21□□□□□ -1.42
CIITA-201ENST00000324288 DEFB1P60022 68 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 ZNF833PQ6ZTB9 187 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 LOXL1Q08397 574 aaPredicted RBP6.2□□□□□ -1.42
CIITA-201ENST00000324288 NDUFA4O00483 81 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 LINC01620Q4KN68 170 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 WT1-ASQ06250 92 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 FOXI1Q12951 378 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 NREPQ16612 68 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 MRPL55Q7Z7F7 128 aaKnown RBP6.2□□□□□ -1.42
CIITA-201ENST00000324288 EPG5Q9HCE0 2579 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 SDIM1Q6ZPB5 146 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 NPBQ8NG41 125 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 ZNF503Q96F45 646 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 SLC25A29Q8N8R3 303 aa6.2□□□□□ -1.42
CIITA-201ENST00000324288 POU2AF1Q16633 256 aa6.19□□□□□ -1.42
CIITA-201ENST00000324288 Q6ZS49 121 aa6.19□□□□□ -1.42
CIITA-201ENST00000324288 IGHV4-59P01825 116 aa6.19□□□□□ -1.42
CIITA-201ENST00000324288 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
CIITA-201ENST00000324288 MRPL53Q96EL3 112 aaKnown RBP6.19□□□□□ -1.42
CIITA-201ENST00000324288 FUSP35637 526 aaKnown RBP eCLIP6.19□□□□□ -1.42
CIITA-201ENST00000324288 SCXQ7RTU7 201 aa6.19□□□□□ -1.42
CIITA-201ENST00000324288 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
CIITA-201ENST00000324288 IGKV2D-26A0A0A0MRZ7 120 aa6.19□□□□□ -1.42
CIITA-201ENST00000324288 LYPD6BQ8NI32 183 aa6.19□□□□□ -1.42
CIITA-201ENST00000324288 PROP1O75360 226 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 HOXB4P17483 251 aaPredicted RBP6.18□□□□□ -1.42
CIITA-201ENST00000324288 BPTFQ12830 3046 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 CAMK2N2Q96S95 79 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 F8W735 103 aaPredicted RBP6.18□□□□□ -1.42
CIITA-201ENST00000324288 RPL39P62891 51 aaKnown RBP6.18□□□□□ -1.42
CIITA-201ENST00000324288 Q6ZUT4 128 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 SEM1Q6ZVN7 128 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 LECT2O14960 151 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 LOXP28300 417 aaPredicted RBP6.18□□□□□ -1.42
CIITA-201ENST00000324288 UPK3BQ9BT76 320 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 GRNP28799 593 aaKnown RBP6.18□□□□□ -1.42
CIITA-201ENST00000324288 HIST2H2BCQ6DN03 193 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 FAM110AQ9BQ89 295 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 C11orf52Q96A22 123 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 LMO1P25800 156 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 Q6ZS92 163 aa6.18□□□□□ -1.42
CIITA-201ENST00000324288 TMEM14CQ9P0S9 112 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 ETV2O00321 342 aaPredicted RBP6.17□□□□□ -1.42
CIITA-201ENST00000324288 LGALS9O00182 355 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 IGLC6P0CF74 106 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 C20orf78Q9BR46 151 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 IGLV3-9A0A075B6K5 115 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 AGPAT4-IT1Q9H0P7 198 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 PLA2G5P39877 138 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 UBE2AP49459 152 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 RNF152Q8N8N0 203 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 FHL1Q13642 323 aa6.17□□□□□ -1.42
CIITA-201ENST00000324288 SPATA12Q7Z6I5 190 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms