RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 SNRPCP09234 159 aaKnown RBP1.64□□□□□ -2.15
HIF1A-201ENST00000323441 METTL15P1P0C7V9 234 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 RRAS2P62070 204 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-201ENST00000323441 TMEM97Q5BJF2 176 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 ZNF506Q5JVG8 444 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 DNLZQ5SXM8 178 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 LYPD6BQ8NI32 183 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 SLC25A2Q9BXI2 301 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 Q9H521 79 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 GPN1Q9HCN4 374 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-201ENST00000323441 A0A087X002 238 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 SERTM2A0A1B0GWG4 89 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 A0A1W2PNN7 141 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 SSSCA1O60232 199 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 ARL16Q0P5N6 197 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 KRTAP13-2Q52LG2 175 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 FXYD5Q96DB9 178 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 GFRA4Q9GZZ7 299 aa1.64□□□□□ -2.15
HIF1A-201ENST00000323441 TRBV6-8A0A0A6YYG3 113 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 GAGE12JA6NER3 117 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 PGPEP1LA6NFU8 196 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 HLA-DQA1P01909 254 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 PYYP10082 97 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 RNASE3P12724 160 aaKnown RBP1.63□□□□□ -2.15
HIF1A-201ENST00000323441 FAUP35544 74 aaKnown RBP1.63□□□□□ -2.15
HIF1A-201ENST00000323441 PTTG1IPP53801 180 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 UBE2D3P61077 147 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 UBE2D2P62837 147 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 GAGE1Q13065 139 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 GAGE4Q13068 117 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 GAGE5Q13069 117 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 NEDD8Q15843 81 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 MPV17L2Q567V2 206 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 MIC13Q5XKP0 118 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 TSKUQ8WUA8 353 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 RSL24D1Q9UHA3 163 aaKnown RBP1.63□□□□□ -2.15
HIF1A-201ENST00000323441 hDV102S1A0JD36 115 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 KRTAP23-1A1A580 65 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 S100A11P31949 105 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 CAV2P51636 162 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 UBE2D1P51668 147 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 PPP1R1AQ13522 171 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 ATP6V1FQ16864 119 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 SOSTQ9BQB4 213 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 SLIRPQ9GZT3 109 aaKnown RBP1.63□□□□□ -2.15
HIF1A-201ENST00000323441 C11orf1Q9H5F2 150 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 UQCC1Q9NVA1 299 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 TRBV7-3A0A075B6L6 115 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 C7orf66A4D0T2 115 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 AMTP48728 403 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 AP3S2P59780 193 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 NCS1P62166 190 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 C1orf137Q5JT78 98 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 LINC00173Q6ZV60 143 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 PHYHIPLQ96FC7 376 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 LINC00526Q96FQ7 95 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 KRTAP3-1Q9BYR8 98 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 VCX3AQ9NNX9 186 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 OTORQ9NRC9 128 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 KCNIP2Q9NS61 270 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 IL36BQ9NZH7 164 aa1.63□□□□□ -2.15
HIF1A-201ENST00000323441 TSPAN13O95857 204 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 LSM3P62310 102 aaKnown RBP1.62□□□□□ -2.15
HIF1A-201ENST00000323441 RPL36AP83881 106 aaKnown RBP1.62□□□□□ -2.15
HIF1A-201ENST00000323441 FAM74A1Q5RGS3 127 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 C14orf178Q8N769 122 aaPredicted RBP1.62□□□□□ -2.15
HIF1A-201ENST00000323441 C15orf54Q8N8G6 183 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 OR2G3Q8NGZ4 309 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 MITD1Q8WV92 249 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 RPL36ALQ969Q0 106 aaKnown RBP1.62□□□□□ -2.15
HIF1A-201ENST00000323441 TVP23CQ96ET8 276 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 DPH3Q96FX2 82 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 RETNLBQ9BQ08 111 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 FUNDC2Q9BWH2 189 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 MRPS26Q9BYN8 205 aaKnown RBP1.62□□□□□ -2.15
HIF1A-201ENST00000323441 OR5AC2Q9NZP5 309 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 NAGKQ9UJ70 344 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 A0A087WXM4 84 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 IGHV3-73A0A0B4J1V6 119 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 A0A1B0GUV1 79 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 C9orf170A2RU37 121 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 MT2AP02795 61 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 MT-ND6P03923 174 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 ANGP03950 147 aaKnown RBP1.62□□□□□ -2.15
HIF1A-201ENST00000323441 SULT1A1P50225 295 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 S100A10P60903 97 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 VBP1P61758 197 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 HBG1P69891 147 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 HBG2P69892 147 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 SS18Q15532 418 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 CTF1Q16619 201 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 PRR27Q6MZM9 219 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 CFAP161Q6P656 301 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 SFRP2Q96HF1 295 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 NPCDR1Q9BY65 106 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 TREM1Q9NP99 234 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 MCUBQ9NWR8 336 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 MDN1Q9NU22 5596 aa1.62□□□□□ -2.15
HIF1A-201ENST00000323441 TSHBP01222 138 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms