RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 A0A0U1RRA0 63 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 LGALS9O00182 355 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 UPK2O00526 184 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 CRYGAP11844 174 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 ZNF22P17026 224 aaPredicted RBP7.93□□□□□ -1.14
SF3B2-201ENST00000322535 NSUN5P1Q3KNT7 163 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 C1orf195Q5TG92 126 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 NUP37Q8NFH4 326 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 SLC25A39Q9BZJ4 359 aaPredicted RBP7.93□□□□□ -1.14
SF3B2-201ENST00000322535 RNF7Q9UBF6 113 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 TRACP01848 142 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 SAA1P0DJI8 122 aaPredicted RBP7.93□□□□□ -1.14
SF3B2-201ENST00000322535 SLC25A16P16260 332 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 U3KQK5 164 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 FASNP49327 2511 aaKnown RBP7.93□□□□□ -1.14
SF3B2-201ENST00000322535 CCDC168Q8NDH2 2452 aa7.93□□□□□ -1.14
SF3B2-201ENST00000322535 Q1RN00 199 aa7.92□□□□□ -1.14
SF3B2-201ENST00000322535 NDUFA11Q86Y39 141 aa7.92□□□□□ -1.14
SF3B2-201ENST00000322535 NBR2O15453 112 aa7.92□□□□□ -1.14
SF3B2-201ENST00000322535 GP9P14770 177 aa7.92□□□□□ -1.14
SF3B2-201ENST00000322535 PSMG4Q5JS54 123 aa7.92□□□□□ -1.14
SF3B2-201ENST00000322535 UBR5O95071 2799 aaPredicted RBP7.92□□□□□ -1.14
SF3B2-201ENST00000322535 AVPP01185 164 aa7.92□□□□□ -1.14
SF3B2-201ENST00000322535 TMEM75Q8N9X5 138 aa7.92□□□□□ -1.14
SF3B2-201ENST00000322535 NXT2Q9NPJ8 142 aaKnown RBP7.92□□□□□ -1.14
SF3B2-201ENST00000322535 ZNF256Q9Y2P7 627 aaPredicted RBP7.92□□□□□ -1.14
SF3B2-201ENST00000322535 TRAV26-2A0A0B4J265 109 aa7.91□□□□□ -1.14
SF3B2-201ENST00000322535 LHBP01229 141 aa7.91□□□□□ -1.14
SF3B2-201ENST00000322535 HERVK_113P61574 105 aa7.91□□□□□ -1.14
SF3B2-201ENST00000322535 DEFB104AQ8WTQ1 72 aa7.91□□□□□ -1.14
SF3B2-201ENST00000322535 CCL3L1P16619 93 aa7.91□□□□□ -1.14
SF3B2-201ENST00000322535 WT1-ASQ06250 92 aa7.91□□□□□ -1.14
SF3B2-201ENST00000322535 WFDC11Q8NEX6 87 aa7.91□□□□□ -1.14
SF3B2-201ENST00000322535 TLN2Q9Y4G6 2542 aa7.9□□□□□ -1.14
SF3B2-201ENST00000322535 OTORQ9NRC9 128 aa7.9□□□□□ -1.14
SF3B2-201ENST00000322535 LY6LH3BQJ8 138 aa7.9□□□□□ -1.15
SF3B2-201ENST00000322535 SH2D1AO60880 128 aa7.9□□□□□ -1.15
SF3B2-201ENST00000322535 GAFA1Q96PS6 74 aa7.9□□□□□ -1.15
SF3B2-201ENST00000322535 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.9□□□□□ -1.155e-7■■■□□ 17
SF3B2-201ENST00000322535 NOTCH2Q04721 2471 aa7.9□□□□□ -1.15
SF3B2-201ENST00000322535 ZNF469Q96JG9 3925 aaPredicted RBP7.9□□□□□ -1.15
SF3B2-201ENST00000322535 TRAV13-1A0A0B4J241 112 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 PLNP26678 52 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 C9orf85Q96MD7 179 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 MRPL20Q9BYC9 149 aaKnown RBP7.89□□□□□ -1.15
SF3B2-201ENST00000322535 CSPG4Q6UVK1 2322 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 H3BMM0 161 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 ELANEP08246 267 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 CFC1P0CG37 223 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 RPL13AP40429 203 aaKnown RBP7.89□□□□□ -1.15
SF3B2-201ENST00000322535 TMEM258P61165 79 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 FBXL19-AS1Q494R0 122 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 LINC00311Q8N616 119 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 UBE2WQ96B02 151 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 ANKRD17O75179 2603 aaKnown RBP7.89□□□□□ -1.15
SF3B2-201ENST00000322535 TMEM178BH3BS89 294 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 LOXP28300 417 aaPredicted RBP7.89□□□□□ -1.15
SF3B2-201ENST00000322535 LINC01561Q8N1V8 128 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 C8orf31Q8N9H6 132 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 Q8TAT8 98 aa7.89□□□□□ -1.15
SF3B2-201ENST00000322535 ZNF843Q8N446 348 aa7.88□□□□□ -1.15
SF3B2-201ENST00000322535 NAV2Q8IVL1 2488 aa7.88□□□□□ -1.15
SF3B2-201ENST00000322535 GCN1Q92616 2671 aaKnown RBP7.88□□□□□ -1.15
SF3B2-201ENST00000322535 HECTD1Q9ULT8 2610 aa7.88□□□□□ -1.15
SF3B2-201ENST00000322535 H7C1H1 209 aa7.87□□□□□ -1.15
SF3B2-201ENST00000322535 EGR2P11161 476 aaPredicted RBP7.87□□□□□ -1.15
SF3B2-201ENST00000322535 Q6ZS46 218 aa7.87□□□□□ -1.15
SF3B2-201ENST00000322535 PRO1854Q9UHT4 67 aa7.87□□□□□ -1.15
SF3B2-201ENST00000322535 RNF185Q96GF1 192 aa7.87□□□□□ -1.15
SF3B2-201ENST00000322535 IGKV2-40A0A087WW87 121 aaPredicted RBP7.86□□□□□ -1.15
SF3B2-201ENST00000322535 F8VRH5 84 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 LINC01619G3V211 115 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 IGKV2D-40P01614 121 aaPredicted RBP7.86□□□□□ -1.15
SF3B2-201ENST00000322535 SUB1P53999 127 aaKnown RBP eCLIP7.86□□□□□ -1.15
SF3B2-201ENST00000322535 LAGE3Q14657 143 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 LINC00482Q8N8I6 264 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 NDUFA4L2Q9NRX3 87 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 SPANXCQ9NY87 97 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 ITPR2Q14571 2701 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 APCP25054 2843 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 SCGB3A1Q96QR1 104 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 SHANK2-AS3Q9BTD1 123 aa7.86□□□□□ -1.15
SF3B2-201ENST00000322535 C17orf58Q2M2W7 97 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 LINC01620Q4KN68 170 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 IGFL4Q6B9Z1 124 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 HIST2H2BCQ6DN03 193 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 DPH3P1Q9H4G8 78 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 RETNQ9HD89 108 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 SMCR5Q8TEV8 140 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 CUBNO60494 3623 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 TMEM200BQ69YZ2 307 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 Q8N8P6 123 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 IMUPQ9GZP8 106 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 AGPAT4-IT1Q9H0P7 198 aa7.85□□□□□ -1.15
SF3B2-201ENST00000322535 HLA-DMBP28068 263 aa7.84□□□□□ -1.15
SF3B2-201ENST00000322535 TIRAPP58753 221 aa7.84□□□□□ -1.15
SF3B2-201ENST00000322535 PRR25Q96S07 402 aa7.84□□□□□ -1.15
SF3B2-201ENST00000322535 TRGV3P03979 118 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms