RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 APRG1Q8IVJ8 170 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 ANKRD29Q8N6D5 301 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 TP53TG1Q9Y2A0 90 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
SKA3-202ENST00000314759 JPT2Q9H910 190 aa10.09□□□□□ -0.79
SKA3-202ENST00000314759 SS18L2Q9UHA2 77 aa10.09□□□□□ -0.79
SKA3-202ENST00000314759 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
SKA3-202ENST00000314759 IGF2RP11717 2491 aa10.08□□□□□ -0.8
SKA3-202ENST00000314759 SPTAN1Q13813 2472 aaKnown RBP10.08□□□□□ -0.8
SKA3-202ENST00000314759 IGHV4OR15-8A0A075B7B6 117 aa10.08□□□□□ -0.8
SKA3-202ENST00000314759 A0A087WW49 117 aa10.08□□□□□ -0.8
SKA3-202ENST00000314759 NXPH4O95158 308 aa10.08□□□□□ -0.8
SKA3-202ENST00000314759 ZNF688P0C7X2 276 aa10.08□□□□□ -0.8
SKA3-202ENST00000314759 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
SKA3-202ENST00000314759 A8MWV9 139 aa10.08□□□□□ -0.8
SKA3-202ENST00000314759 IGHV3-11P01762 117 aa10.08□□□□□ -0.8
SKA3-202ENST00000314759 CRIP2P52943 208 aaPredicted RBP10.08□□□□□ -0.8
SKA3-202ENST00000314759 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
SKA3-202ENST00000314759 IGHV1-69DA0A0B4J2H0 117 aa10.07□□□□□ -0.8
SKA3-202ENST00000314759 SBSPONQ8IVN8 264 aa10.07□□□□□ -0.8
SKA3-202ENST00000314759 ANAPC13Q9BS18 74 aa10.07□□□□□ -0.8
SKA3-202ENST00000314759 VPS13CQ709C8 3753 aa10.07□□□□□ -0.8
SKA3-202ENST00000314759 PMVKQ15126 192 aa10.07□□□□□ -0.8
SKA3-202ENST00000314759 UBTD1Q9HAC8 227 aa10.07□□□□□ -0.8
SKA3-202ENST00000314759 IGHV3-30P01768 117 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 SCGB1C2P0DMR2 95 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 IGHV3-30-5P0DP03 117 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 RPL32P62910 135 aaKnown RBP10.06□□□□□ -0.8
SKA3-202ENST00000314759 PAPPA-AS1Q5QFB9 102 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 RAX2Q96IS3 184 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 A0A087WWL8 130 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 SRD5A1P18405 259 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 HERVK_113P61574 105 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 BRD3OSQ6XYD6 125 aa10.06□□□□□ -0.8
SKA3-202ENST00000314759 TRBV7-9A0A0J9YWB2 115 aa10.05□□□□□ -0.8
SKA3-202ENST00000314759 TRPT1Q86TN4 253 aaKnown RBP10.05□□□□□ -0.8
SKA3-202ENST00000314759 C10orf126Q8N4M7 172 aa10.05□□□□□ -0.8
SKA3-202ENST00000314759 ZNRF2Q8NHG8 242 aa10.05□□□□□ -0.8
SKA3-202ENST00000314759 RHPN1-AS1Q9BWJ2 59 aa10.05□□□□□ -0.8
SKA3-202ENST00000314759 VCYO14598 125 aa10.05□□□□□ -0.8
SKA3-202ENST00000314759 EIF4EBP3O60516 100 aaPredicted RBP10.05□□□□□ -0.8
SKA3-202ENST00000314759 HIVEP3Q5T1R4 2406 aa10.05□□□□□ -0.8
SKA3-202ENST00000314759 TRBV20-1A0A075B6N2 111 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 KLLNB2CW77 178 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 NHLRC4P0CG21 123 aaPredicted RBP10.04□□□□□ -0.8
SKA3-202ENST00000314759 KLRB1Q12918 225 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 ZFAND6Q6FIF0 208 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 SLC25A29Q8N8R3 303 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 TMEM141Q96I45 108 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 LYRM7Q5U5X0 104 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 FAM159AQ6UWV7 190 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 ABCA2Q9BZC7 2435 aa10.04□□□□□ -0.8
SKA3-202ENST00000314759 COL12A1Q99715 3063 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 SDHAF1A6NFY7 115 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 B5MCH6 92 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 F5H697 171 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 AMELXQ99217 191 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 TIMM17AQ99595 171 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 PRO1854Q9UHT4 67 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 C9JAW5 83 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 H7C2G1 150 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 ZNF876PQ49A33 203 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 TEX29Q8N6K0 151 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 CITED1Q99966 193 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 SLC25A20O43772 301 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 EDN2P20800 178 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 LY6EQ16553 131 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 USMG5Q96IX5 58 aa10.03□□□□□ -0.8
SKA3-202ENST00000314759 CRLF1O75462 422 aa10.02□□□□□ -0.81
SKA3-202ENST00000314759 IGHV1-69P01742 117 aa10.02□□□□□ -0.81
SKA3-202ENST00000314759 PF4V1P10720 104 aa10.02□□□□□ -0.81
SKA3-202ENST00000314759 TRBV27A0A0K0K1C4 114 aa10.02□□□□□ -0.81
SKA3-202ENST00000314759 ELANEP08246 267 aa10.02□□□□□ -0.81
SKA3-202ENST00000314759 TRAV12-3A0A0B4J271 114 aa10.01□□□□□ -0.81
SKA3-202ENST00000314759 GAGE5Q13069 117 aa10.01□□□□□ -0.81
SKA3-202ENST00000314759 GAGE6Q13070 117 aa10.01□□□□□ -0.81
SKA3-202ENST00000314759 TRAV4A0A0B4J268 109 aa10.01□□□□□ -0.81
SKA3-202ENST00000314759 A4D1N5 150 aa10.01□□□□□ -0.81
SKA3-202ENST00000314759 J3QQQ9 107 aa10.01□□□□□ -0.81
SKA3-202ENST00000314759 OPRPNQ99935 248 aaPredicted RBP10.01□□□□□ -0.81
SKA3-202ENST00000314759 DAZ1Q9NQZ3 744 aaKnown RBP10.01□□□□□ -0.81
SKA3-202ENST00000314759 IGHG2P01859 326 aa10□□□□□ -0.81
SKA3-202ENST00000314759 FAM74A4Q5TZK3 123 aa10□□□□□ -0.81
SKA3-202ENST00000314759 VCX2Q9H322 139 aa10□□□□□ -0.81
SKA3-202ENST00000314759 ZNF256Q9Y2P7 627 aaPredicted RBP10□□□□□ -0.81
SKA3-202ENST00000314759 LGALS9O00182 355 aa10□□□□□ -0.81
SKA3-202ENST00000314759 BLCAPP62952 87 aa10□□□□□ -0.81
SKA3-202ENST00000314759 TRBV6-5A0A0K0K1A5 114 aa10□□□□□ -0.81
SKA3-202ENST00000314759 H3BUA1 57 aa10□□□□□ -0.81
SKA3-202ENST00000314759 BRI3O95415 125 aa10□□□□□ -0.81
SKA3-202ENST00000314759 TMEM262E9PQX1 116 aa9.99□□□□□ -0.81
SKA3-202ENST00000314759 DCANP1Q8TF63 244 aa9.99□□□□□ -0.81
SKA3-202ENST00000314759 IGHV3-64A0A075B6Q5 118 aa9.99□□□□□ -0.81
SKA3-202ENST00000314759 IGHV3-33P01772 117 aa9.99□□□□□ -0.81
SKA3-202ENST00000314759 LGALS3P17931 250 aaKnown RBP9.99□□□□□ -0.81
SKA3-202ENST00000314759 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
SKA3-202ENST00000314759 IGHV4-38-2P0DP08 117 aa9.98□□□□□ -0.81
SKA3-202ENST00000314759 NTN5Q8WTR8 489 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms