RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 KRTAP4-5Q9BYR2 181 aa9.81□□□□□ -0.84
PPP1CA-201ENST00000312989 GTSF1LQ9H1H1 148 aa9.81□□□□□ -0.84
PPP1CA-201ENST00000312989 MSRB1Q9NZV6 116 aa9.81□□□□□ -0.84
PPP1CA-201ENST00000312989 A0A087WWL8 130 aa9.8□□□□□ -0.84
PPP1CA-201ENST00000312989 GAGE12JA6NER3 117 aa9.8□□□□□ -0.84
PPP1CA-201ENST00000312989 M0R381 172 aa9.8□□□□□ -0.84
PPP1CA-201ENST00000312989 GAGE1Q13065 139 aa9.8□□□□□ -0.84
PPP1CA-201ENST00000312989 GAGE4Q13068 117 aa9.8□□□□□ -0.84
PPP1CA-201ENST00000312989 GAGE5Q13069 117 aa9.8□□□□□ -0.84
PPP1CA-201ENST00000312989 GAGE13Q4V321 117 aa9.8□□□□□ -0.84
PPP1CA-201ENST00000312989 ATP6V0E2Q8NHE4 81 aa9.8□□□□□ -0.84
PPP1CA-201ENST00000312989 hCG_2014768A0A024R1R8 64 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 A0A087WTM6 91 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 C19orf71A6NCJ1 209 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 RHODO00212 210 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 CDK2AP2O75956 126 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 EVI2AP22794 236 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 FUSP35637 526 aaKnown RBP eCLIP9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 CENPWQ5EE01 88 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 EIF5AL1Q6IS14 154 aaKnown RBP9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 AKAP14Q86UN6 197 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 ZFP82Q8N141 532 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 SYT8Q8NBV8 401 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 PHLDA3Q9Y5J5 127 aa9.79□□□□□ -0.84
PPP1CA-201ENST00000312989 IBA57-AS1B1ANH7 110 aa9.78□□□□□ -0.84
PPP1CA-201ENST00000312989 OR5AL1P0C617 328 aa9.78□□□□□ -0.84
PPP1CA-201ENST00000312989 MEF2BQ02080 365 aaPredicted RBP9.78□□□□□ -0.84
PPP1CA-201ENST00000312989 NFE4Q86UQ8 179 aa9.78□□□□□ -0.84
PPP1CA-201ENST00000312989 KIF25-AS1Q9Y6Z4 181 aa9.78□□□□□ -0.84
PPP1CA-201ENST00000312989 TRAV9-2A0A087WT02 112 aa9.77□□□□□ -0.84
PPP1CA-201ENST00000312989 RAB19A4D1S5 217 aa9.77□□□□□ -0.84
PPP1CA-201ENST00000312989 LRCOL1A6NCL2 159 aa9.77□□□□□ -0.84
PPP1CA-201ENST00000312989 BCL2P10415 239 aa9.77□□□□□ -0.84
PPP1CA-201ENST00000312989 FAM74A4Q5TZK3 123 aa9.77□□□□□ -0.84
PPP1CA-201ENST00000312989 PRR27Q6MZM9 219 aa9.77□□□□□ -0.84
PPP1CA-201ENST00000312989 C10orf126Q8N4M7 172 aa9.77□□□□□ -0.84
PPP1CA-201ENST00000312989 A0A1B0GVG6 124 aa9.76□□□□□ -0.85
PPP1CA-201ENST00000312989 IGLC6P0CF74 106 aa9.76□□□□□ -0.85
PPP1CA-201ENST00000312989 OR10J3Q5JRS4 329 aa9.76□□□□□ -0.85
PPP1CA-201ENST00000312989 TRAV8-6A0A0B4J262 113 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 OR10G8Q8NGN5 311 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 LYPD6BQ8NI32 183 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 MUC21A0A0G2JKD1 596 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 TRBV10-1A0A0K0K1A3 114 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 MUC21A0A140T8X8 626 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 PDE6DO43924 150 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 IGHV3-30P01768 117 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 IGHV3-30-3P0DP02 117 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 IGHV3-30-5P0DP03 117 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 GZMBP10144 247 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 ERVFC1-1P60608 527 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 UBE2D3P61077 147 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 UBE2D2P62837 147 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 SMIM12Q96EX1 92 aa9.75□□□□□ -0.85
PPP1CA-201ENST00000312989 LAGE3Q14657 143 aa9.74□□□□□ -0.85
PPP1CA-201ENST00000312989 VAX2Q9UIW0 290 aa9.74□□□□□ -0.85
PPP1CA-201ENST00000312989 ALKAL2Q6UX46 152 aa9.73□□□□□ -0.85
PPP1CA-201ENST00000312989 NEXN-AS1Q8NBZ9 246 aa9.73□□□□□ -0.85
PPP1CA-201ENST00000312989 RBFOX3A6NFN3 312 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 TEX46H3BTG2 121 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 GNG4P50150 75 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 NKX2-5P52952 324 aaPredicted RBP9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 RAB4BP61018 213 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 WFDC2Q14508 124 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 DAZ4Q86SG3 579 aaKnown RBP9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 NIT1Q86X76 327 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 DNAJC30Q96LL9 226 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 DAZ3Q9NR90 486 aaKnown RBP9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 MED9Q9NWA0 146 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 VPS13BQ7Z7G8 4022 aa9.72□□□□□ -0.85
PPP1CA-201ENST00000312989 TRBV7-3A0A075B6L6 115 aa9.71□□□□□ -0.86
PPP1CA-201ENST00000312989 A0A087WWC5 75 aa9.71□□□□□ -0.86
PPP1CA-201ENST00000312989 K7EN84 100 aa9.71□□□□□ -0.86
PPP1CA-201ENST00000312989 IFNA1P01562 189 aa9.71□□□□□ -0.86
PPP1CA-201ENST00000312989 KRTAP10-1P60331 282 aa9.71□□□□□ -0.86
PPP1CA-201ENST00000312989 CDPF1Q6NVV7 123 aa9.71□□□□□ -0.86
PPP1CA-201ENST00000312989 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
PPP1CA-201ENST00000312989 OR2D3Q8NGH3 330 aa9.71□□□□□ -0.86
PPP1CA-201ENST00000312989 Q9HAA7 133 aa9.7□□□□□ -0.86
PPP1CA-201ENST00000312989 XGP55808 180 aa9.69□□□□□ -0.86
PPP1CA-201ENST00000312989 RPL36AP83881 106 aaKnown RBP9.69□□□□□ -0.86
PPP1CA-201ENST00000312989 SPANXN1Q5VSR9 72 aa9.69□□□□□ -0.86
PPP1CA-201ENST00000312989 FER1L6-AS1Q8NA97 138 aa9.69□□□□□ -0.86
PPP1CA-201ENST00000312989 NUDT10Q8NFP7 164 aa9.69□□□□□ -0.86
PPP1CA-201ENST00000312989 RPL36ALQ969Q0 106 aaKnown RBP9.69□□□□□ -0.86
PPP1CA-201ENST00000312989 NUDT11Q96G61 164 aa9.69□□□□□ -0.86
PPP1CA-201ENST00000312989 TAGLN2P37802 199 aaKnown RBP9.68□□□□□ -0.86
PPP1CA-201ENST00000312989 CTRLP40313 264 aa9.68□□□□□ -0.86
PPP1CA-201ENST00000312989 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
PPP1CA-201ENST00000312989 ZNF56Q15929 161 aa9.68□□□□□ -0.86
PPP1CA-201ENST00000312989 NTM-AS1Q6ZSK4 140 aa9.68□□□□□ -0.86
PPP1CA-201ENST00000312989 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
PPP1CA-201ENST00000312989 M0QY20 66 aa9.67□□□□□ -0.86
PPP1CA-201ENST00000312989 SSTP61278 116 aa9.67□□□□□ -0.86
PPP1CA-201ENST00000312989 Q8N1X5 172 aa9.67□□□□□ -0.86
PPP1CA-201ENST00000312989 Q8N814 137 aa9.67□□□□□ -0.86
PPP1CA-201ENST00000312989 OCC1Q8TAD7 63 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms