RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.71□□□□□ -0.22
VEGFB-201ENST00000309422 OCC1Q8TAD7 63 aa13.71□□□□□ -0.22
VEGFB-201ENST00000309422 SIVA1O15304 175 aa13.7□□□□□ -0.22
VEGFB-201ENST00000309422 LYPD5Q6UWN5 251 aa13.7□□□□□ -0.22
VEGFB-201ENST00000309422 NUDT10Q8NFP7 164 aa13.7□□□□□ -0.22
VEGFB-201ENST00000309422 NUDT11Q96G61 164 aa13.7□□□□□ -0.22
VEGFB-201ENST00000309422 SSBP4Q9BWG4 385 aaPredicted RBP13.7□□□□□ -0.22
VEGFB-201ENST00000309422 TRAV9-2A0A087WT02 112 aa13.69□□□□□ -0.22
VEGFB-201ENST00000309422 LOC100131303A0A0U1RQF7 123 aa13.69□□□□□ -0.22
VEGFB-201ENST00000309422 GATCO43716 136 aaKnown RBP13.69□□□□□ -0.22
VEGFB-201ENST00000309422 SRP19P09132 144 aaKnown RBP13.69□□□□□ -0.22
VEGFB-201ENST00000309422 TRGC1P0CF51 173 aa13.69□□□□□ -0.22
VEGFB-201ENST00000309422 GZMBP10144 247 aa13.69□□□□□ -0.22
VEGFB-201ENST00000309422 C1orf134Q5TEV5 83 aa13.69□□□□□ -0.22
VEGFB-201ENST00000309422 LINC00336Q6ZUF6 198 aa13.69□□□□□ -0.22
VEGFB-201ENST00000309422 BORCS7Q96B45 105 aa13.69□□□□□ -0.22
VEGFB-201ENST00000309422 SAMD10Q9BYL1 202 aa13.69□□□□□ -0.22
VEGFB-201ENST00000309422 RNASE7Q9H1E1 156 aaKnown RBP13.69□□□□□ -0.22
VEGFB-201ENST00000309422 JPT2Q9H910 190 aa13.69□□□□□ -0.22
VEGFB-201ENST00000309422 TRAV8-6A0A0B4J262 113 aa13.68□□□□□ -0.22
VEGFB-201ENST00000309422 MUC21A0A0G2JKD1 596 aa13.68□□□□□ -0.22
VEGFB-201ENST00000309422 MUC21A0A140T8X8 626 aa13.68□□□□□ -0.22
VEGFB-201ENST00000309422 F5H697 171 aa13.68□□□□□ -0.22
VEGFB-201ENST00000309422 C15orf54Q8N8G6 183 aa13.68□□□□□ -0.22
VEGFB-201ENST00000309422 GAGE12JA6NER3 117 aa13.67□□□□□ -0.22
VEGFB-201ENST00000309422 K7EN84 100 aa13.67□□□□□ -0.22
VEGFB-201ENST00000309422 GAGE1Q13065 139 aa13.67□□□□□ -0.22
VEGFB-201ENST00000309422 GAGE4Q13068 117 aa13.67□□□□□ -0.22
VEGFB-201ENST00000309422 GAGE5Q13069 117 aa13.67□□□□□ -0.22
VEGFB-201ENST00000309422 GAGE13Q4V321 117 aa13.67□□□□□ -0.22
VEGFB-201ENST00000309422 SMIM15Q7Z3B0 74 aa13.67□□□□□ -0.22
VEGFB-201ENST00000309422 ATP6V0E2Q8NHE4 81 aa13.67□□□□□ -0.22
VEGFB-201ENST00000309422 TRBV10-1A0A0K0K1A3 114 aa13.66□□□□□ -0.22
VEGFB-201ENST00000309422 IGLC6P0CF74 106 aa13.66□□□□□ -0.22
VEGFB-201ENST00000309422 TIRAPP58753 221 aa13.66□□□□□ -0.22
VEGFB-201ENST00000309422 RAB4BP61018 213 aa13.66□□□□□ -0.22
VEGFB-201ENST00000309422 RPL36AP83881 106 aaKnown RBP13.66□□□□□ -0.22
VEGFB-201ENST00000309422 OR10J3Q5JRS4 329 aa13.66□□□□□ -0.22
VEGFB-201ENST00000309422 FAM231DQ6ZW35 169 aa13.66□□□□□ -0.22
VEGFB-201ENST00000309422 RPL36ALQ969Q0 106 aaKnown RBP13.66□□□□□ -0.22
VEGFB-201ENST00000309422 A8MWL6 223 aa13.65□□□□□ -0.22
VEGFB-201ENST00000309422 EVI2AP22794 236 aa13.65□□□□□ -0.22
VEGFB-201ENST00000309422 UFSP1Q6NVU6 142 aa13.65□□□□□ -0.22
VEGFB-201ENST00000309422 Q6ZR54 194 aa13.65□□□□□ -0.22
VEGFB-201ENST00000309422 C14orf178Q8N769 122 aaPredicted RBP13.65□□□□□ -0.22
VEGFB-201ENST00000309422 H7C1H1 209 aa13.64□□□□□ -0.23
VEGFB-201ENST00000309422 CRYGDP07320 174 aa13.64□□□□□ -0.23
VEGFB-201ENST00000309422 MGPP08493 103 aa13.64□□□□□ -0.23
VEGFB-201ENST00000309422 TMEM241Q24JQ0 296 aa13.64□□□□□ -0.23
VEGFB-201ENST00000309422 CT83Q5H943 113 aa13.64□□□□□ -0.23
VEGFB-201ENST00000309422 LINC01551Q86U37 167 aa13.64□□□□□ -0.23
VEGFB-201ENST00000309422 GTSF1LQ9H1H1 148 aa13.64□□□□□ -0.23
VEGFB-201ENST00000309422 NAT8Q9UHE5 227 aa13.64□□□□□ -0.23
VEGFB-201ENST00000309422 K7EP13 123 aa13.63□□□□□ -0.23
VEGFB-201ENST00000309422 CTRLP40313 264 aa13.63□□□□□ -0.23
VEGFB-201ENST00000309422 TWIST1Q15672 202 aa13.63□□□□□ -0.23
VEGFB-201ENST00000309422 ADIRFQ15847 76 aa13.63□□□□□ -0.23
VEGFB-201ENST00000309422 LYZL1Q6UWQ5 148 aa13.63□□□□□ -0.23
VEGFB-201ENST00000309422 ZNF575Q86XF7 245 aa13.63□□□□□ -0.23
VEGFB-201ENST00000309422 C6orf223Q8N319 242 aa13.63□□□□□ -0.23
VEGFB-201ENST00000309422 A0A087WWC5 75 aa13.62□□□□□ -0.23
VEGFB-201ENST00000309422 BTF3P20290 206 aaKnown RBP13.62□□□□□ -0.23
VEGFB-201ENST00000309422 C10orf126Q8N4M7 172 aa13.62□□□□□ -0.23
VEGFB-201ENST00000309422 LELP1Q5T871 98 aa13.61□□□□□ -0.23
VEGFB-201ENST00000309422 WDR73Q6P4I2 378 aa13.61□□□□□ -0.23
VEGFB-201ENST00000309422 KCNIP4Q6PIL6 250 aa13.6□□□□□ -0.23
VEGFB-201ENST00000309422 Q6ZSN1 163 aa13.6□□□□□ -0.23
VEGFB-201ENST00000309422 OSTCQ9NRP0 149 aa13.6□□□□□ -0.23
VEGFB-201ENST00000309422 TRBV7-3A0A075B6L6 115 aa13.59□□□□□ -0.23
VEGFB-201ENST00000309422 PRSS29PA6NIE9 313 aa13.59□□□□□ -0.23
VEGFB-201ENST00000309422 DPH3P1Q9H4G8 78 aa13.59□□□□□ -0.23
VEGFB-201ENST00000309422 IGHV3-38A0A0C4DH36 116 aa13.58□□□□□ -0.23
VEGFB-201ENST00000309422 NTF3P20783 257 aa13.58□□□□□ -0.23
VEGFB-201ENST00000309422 WFDC10BQ8IUB3 73 aa13.58□□□□□ -0.23
VEGFB-201ENST00000309422 URGCP-MRPS24S4R325 110 aa13.58□□□□□ -0.23
VEGFB-201ENST00000309422 CLLU1Q5K131 121 aa13.58□□□□□ -0.24
VEGFB-201ENST00000309422 TSKUQ8WUA8 353 aa13.58□□□□□ -0.24
VEGFB-201ENST00000309422 GFRA4Q9GZZ7 299 aa13.58□□□□□ -0.24
VEGFB-201ENST00000309422 NACAE9PAV3 2078 aa13.57□□□□□ -0.24
VEGFB-201ENST00000309422 NFE4Q86UQ8 179 aa13.57□□□□□ -0.24
VEGFB-201ENST00000309422 ISOC2Q96AB3 205 aa13.57□□□□□ -0.24
VEGFB-201ENST00000309422 PGLYRP4Q96LB8 373 aa13.57□□□□□ -0.24
VEGFB-201ENST00000309422 CNFNQ9BYD5 112 aa13.57□□□□□ -0.24
VEGFB-201ENST00000309422 TNFRSF18Q9Y5U5 241 aa13.57□□□□□ -0.24
VEGFB-201ENST00000309422 DNAH10Q8IVF4 4471 aa13.56□□□□□ -0.24
VEGFB-201ENST00000309422 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
VEGFB-201ENST00000309422 DNAH10OSP0CZ25 163 aa13.56□□□□□ -0.24
VEGFB-201ENST00000309422 LINC00694P0DN24 101 aa13.56□□□□□ -0.24
VEGFB-201ENST00000309422 RPL23P62829 140 aaKnown RBP13.56□□□□□ -0.24
VEGFB-201ENST00000309422 SRSF3P84103 164 aaKnown RBP13.56□□□□□ -0.24
VEGFB-201ENST00000309422 TMEM97Q5BJF2 176 aa13.56□□□□□ -0.24
VEGFB-201ENST00000309422 OR10G8Q8NGN5 311 aa13.56□□□□□ -0.24
VEGFB-201ENST00000309422 GTSF1Q8WW33 167 aa13.55□□□□□ -0.24
VEGFB-201ENST00000309422 MSRB1Q9NZV6 116 aa13.55□□□□□ -0.24
VEGFB-201ENST00000309422 HIGD1CA8MV81 97 aa13.54□□□□□ -0.24
VEGFB-201ENST00000309422 C9JQL5 133 aa13.54□□□□□ -0.24
VEGFB-201ENST00000309422 RTL8CO15255 209 aa13.54□□□□□ -0.24
VEGFB-201ENST00000309422 LINC01556Q5JQF7 62 aa13.54□□□□□ -0.24
VEGFB-201ENST00000309422 DNAJC30Q96LL9 226 aa13.54□□□□□ -0.24
VEGFB-201ENST00000309422 LINC00315P59091 139 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms