RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 NDUFA7O95182 113 aa17.92■□□□□ 0.46
SHISA5-201ENST00000296444 TRAV12-2A0A075B6T6 113 aa17.91■□□□□ 0.46
SHISA5-201ENST00000296444 FBLL1A6NHQ2 334 aaKnown RBP17.91■□□□□ 0.46
SHISA5-201ENST00000296444 BMI1P35226 326 aa17.91■□□□□ 0.46
SHISA5-201ENST00000296444 SNAI2O43623 268 aa17.91■□□□□ 0.46
SHISA5-201ENST00000296444 ID1P41134 155 aa17.9■□□□□ 0.46
SHISA5-201ENST00000296444 TIMM8BQ9Y5J9 83 aaPredicted RBP17.9■□□□□ 0.46
SHISA5-201ENST00000296444 MAST4O15021 2626 aa17.9■□□□□ 0.46
SHISA5-201ENST00000296444 ZNF493Q6ZR52 646 aa17.9■□□□□ 0.46
SHISA5-201ENST00000296444 A0A0J9YX75 114 aa17.89■□□□□ 0.45
SHISA5-201ENST00000296444 A0A1W2PPM0 123 aa17.89■□□□□ 0.45
SHISA5-201ENST00000296444 IGLC6P0CF74 106 aa17.89■□□□□ 0.45
SHISA5-201ENST00000296444 FXYD7P58549 80 aa17.89■□□□□ 0.45
SHISA5-201ENST00000296444 DEFB131AP59861 70 aa17.89■□□□□ 0.45
SHISA5-201ENST00000296444 LINC01559Q495D7 138 aa17.89■□□□□ 0.45
SHISA5-201ENST00000296444 APRG1Q8IVJ8 170 aa17.89■□□□□ 0.45
SHISA5-201ENST00000296444 PEMTQ9UBM1 199 aa17.89■□□□□ 0.45
SHISA5-201ENST00000296444 U3KQK5 164 aa17.88■□□□□ 0.45
SHISA5-201ENST00000296444 A0A096LNJ9 63 aa17.87■□□□□ 0.45
SHISA5-201ENST00000296444 GNRH2O43555 120 aa17.87■□□□□ 0.45
SHISA5-201ENST00000296444 SNRPD3P62318 126 aaKnown RBP17.87■□□□□ 0.45
SHISA5-201ENST00000296444 SPCS1Q9Y6A9 102 aa17.87■□□□□ 0.45
SHISA5-201ENST00000296444 SCGB1A1P11684 91 aa17.87■□□□□ 0.45
SHISA5-201ENST00000296444 DYNLRB2Q8TF09 96 aa17.87■□□□□ 0.45
SHISA5-201ENST00000296444 PRM2P04554 102 aa17.86■□□□□ 0.45
SHISA5-201ENST00000296444 FABP2P12104 132 aa17.86■□□□□ 0.45
SHISA5-201ENST00000296444 SPINK13Q1W4C9 94 aa17.86■□□□□ 0.45
SHISA5-201ENST00000296444 ZNF256Q9Y2P7 627 aaPredicted RBP17.86■□□□□ 0.45
SHISA5-201ENST00000296444 IFI27P40305 119 aaPredicted RBP17.85■□□□□ 0.45
SHISA5-201ENST00000296444 ANXA2RQ3ZCQ2 193 aa17.85■□□□□ 0.45
SHISA5-201ENST00000296444 TRAV12-3A0A0B4J271 114 aa17.84■□□□□ 0.45
SHISA5-201ENST00000296444 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.84■□□□□ 0.45
SHISA5-201ENST00000296444 STAB1Q9NY15 2570 aa17.84■□□□□ 0.45
SHISA5-201ENST00000296444 PKD1L1Q8TDX9 2849 aa17.84■□□□□ 0.45
SHISA5-201ENST00000296444 GAS8-AS1O95177 125 aa17.84■□□□□ 0.45
SHISA5-201ENST00000296444 SIGLEC8Q9NYZ4 499 aa17.84■□□□□ 0.45
SHISA5-201ENST00000296444 RBMY1BA6NDE4 496 aaKnown RBP17.83■□□□□ 0.45
SHISA5-201ENST00000296444 RBMY1EA6NEQ0 496 aaKnown RBP17.83■□□□□ 0.45
SHISA5-201ENST00000296444 HBDP02042 147 aa17.83■□□□□ 0.45
SHISA5-201ENST00000296444 RBMY1DP0C7P1 496 aaKnown RBP17.83■□□□□ 0.45
SHISA5-201ENST00000296444 KLLNB2CW77 178 aa17.83■□□□□ 0.44
SHISA5-201ENST00000296444 AMN1Q8IY45 258 aa17.83■□□□□ 0.44
SHISA5-201ENST00000296444 LENEPQ9Y5L5 61 aa17.83■□□□□ 0.44
SHISA5-201ENST00000296444 MUC4Q99102 2169 aa17.82■□□□□ 0.44
SHISA5-201ENST00000296444 CACNG7P62955 275 aa17.82■□□□□ 0.44
SHISA5-201ENST00000296444 TWIST1Q15672 202 aa17.82■□□□□ 0.44
SHISA5-201ENST00000296444 AMTNQ6UX39 209 aa17.82■□□□□ 0.44
SHISA5-201ENST00000296444 NBEAL2Q6ZNJ1 2754 aa17.81■□□□□ 0.44
SHISA5-201ENST00000296444 H3BVH4 76 aa17.81■□□□□ 0.44
SHISA5-201ENST00000296444 SAMD13Q5VXD3 122 aa17.81■□□□□ 0.44
SHISA5-201ENST00000296444 PRELID3AQ96N28 172 aa17.81■□□□□ 0.44
SHISA5-201ENST00000296444 SMIM13P0DJ93 91 aa17.81■□□□□ 0.44
SHISA5-201ENST00000296444 ORMDL3Q8N138 153 aa17.81■□□□□ 0.44
SHISA5-201ENST00000296444 MAP6D1Q9H9H5 199 aa17.81■□□□□ 0.44
SHISA5-201ENST00000296444 HIGD1BQ9P298 99 aa17.81■□□□□ 0.44
SHISA5-201ENST00000296444 RBMY1A1P0DJD3 496 aaKnown RBP17.8■□□□□ 0.44
SHISA5-201ENST00000296444 RBMY1CP0DJD4 496 aa17.8■□□□□ 0.44
SHISA5-201ENST00000296444 RBMY1FQ15415 496 aaKnown RBP17.8■□□□□ 0.44
SHISA5-201ENST00000296444 FAM104BQ5XKR9 115 aa17.8■□□□□ 0.44
SHISA5-201ENST00000296444 D6R8Y8 96 aa17.8■□□□□ 0.44
SHISA5-201ENST00000296444 SMKR1H3BMG3 65 aa17.8■□□□□ 0.44
SHISA5-201ENST00000296444 IFI27L1Q96BM0 104 aa17.8■□□□□ 0.44
SHISA5-201ENST00000296444 SAMD5Q5TGI4 173 aa17.79■□□□□ 0.44
SHISA5-201ENST00000296444 RAB37Q96AX2 223 aa17.79■□□□□ 0.44
SHISA5-201ENST00000296444 ODF3L2Q3SX64 289 aa17.79■□□□□ 0.44
SHISA5-201ENST00000296444 WFDC10AQ9H1F0 79 aa17.79■□□□□ 0.44
SHISA5-201ENST00000296444 TRAV21A0A0B4J279 112 aa17.78■□□□□ 0.44
SHISA5-201ENST00000296444 NAA38Q9BRA0 125 aaKnown RBP17.78■□□□□ 0.44
SHISA5-201ENST00000296444 H3BMM0 161 aa17.76■□□□□ 0.43
SHISA5-201ENST00000296444 EVI2AP22794 236 aa17.76■□□□□ 0.43
SHISA5-201ENST00000296444 FOXI2Q6ZQN5 318 aa17.76■□□□□ 0.43
SHISA5-201ENST00000296444 LOC389332A0A1B0GUA5 103 aa17.76■□□□□ 0.43
SHISA5-201ENST00000296444 RNASE3P12724 160 aaKnown RBP17.75■□□□□ 0.43
SHISA5-201ENST00000296444 NMUP48645 174 aa17.75■□□□□ 0.43
SHISA5-201ENST00000296444 CNFNQ9BYD5 112 aa17.75■□□□□ 0.43
SHISA5-201ENST00000296444 GATA1P15976 413 aaPredicted RBP17.74■□□□□ 0.43
SHISA5-201ENST00000296444 PCP2Q8IVA1 136 aa17.74■□□□□ 0.43
SHISA5-201ENST00000296444 CD7P09564 240 aa17.74■□□□□ 0.43
SHISA5-201ENST00000296444 RNF185Q96GF1 192 aa17.74■□□□□ 0.43
SHISA5-201ENST00000296444 MRPL51Q4U2R6 128 aaKnown RBP17.73■□□□□ 0.43
SHISA5-201ENST00000296444 MDFICQ9P1T7 246 aa17.73■□□□□ 0.43
SHISA5-201ENST00000296444 M0R381 172 aa17.72■□□□□ 0.43
SHISA5-201ENST00000296444 HLA-DRB4P13762 266 aa17.72■□□□□ 0.43
SHISA5-201ENST00000296444 SIGMAR1Q99720 223 aa17.72■□□□□ 0.43
SHISA5-201ENST00000296444 HLA-DRB4X5D2U9 266 aa17.72■□□□□ 0.43
SHISA5-201ENST00000296444 RPL24P83731 157 aaKnown RBP17.72■□□□□ 0.43
SHISA5-201ENST00000296444 LINC01546A6NGU7 62 aa17.71■□□□□ 0.43
SHISA5-201ENST00000296444 HTN1P15515 57 aa17.71■□□□□ 0.43
SHISA5-201ENST00000296444 NDUFA11Q86Y39 141 aa17.71■□□□□ 0.43
SHISA5-201ENST00000296444 SPAG8Q99932 426 aaPredicted RBP17.71■□□□□ 0.43
SHISA5-201ENST00000296444 ZMAT4Q9H898 229 aa17.71■□□□□ 0.43
SHISA5-201ENST00000296444 JPT2Q9H910 190 aa17.71■□□□□ 0.43
SHISA5-201ENST00000296444 TRAV26-2A0A0B4J265 109 aa17.71■□□□□ 0.42
SHISA5-201ENST00000296444 TEX48A0A1B0GUV7 120 aa17.71■□□□□ 0.42
SHISA5-201ENST00000296444 COL6A5A8TX70 2615 aa17.71■□□□□ 0.42
SHISA5-201ENST00000296444 J3QR89 54 aa17.71■□□□□ 0.42
SHISA5-201ENST00000296444 TRBV7-9A0A0J9YWB2 115 aa17.7■□□□□ 0.42
SHISA5-201ENST00000296444 IGLV1-51P01701 117 aa17.69■□□□□ 0.42
SHISA5-201ENST00000296444 S100A4P26447 101 aaKnown RBP17.69■□□□□ 0.42
SHISA5-201ENST00000296444 CMYA5Q8N3K9 4069 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms