RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 C9orf139Q6ZV77 190 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 C15orf53Q8NAA6 179 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 CITED1Q99966 193 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 M0R1W7 72 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 PPP1R17O96001 155 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 IGHV3-33P01772 117 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 NPC2P61916 151 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 GPHB5Q86YW7 130 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 SBSPONQ8IVN8 264 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 MRPL53Q96EL3 112 aaKnown RBP7.75□□□□□ -1.17
LMX1A-201ENST00000294816 LINC00477Q96M19 166 aa7.75□□□□□ -1.17
LMX1A-201ENST00000294816 SDHAF1A6NFY7 115 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 RHODO00212 210 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 ELANEP08246 267 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 Q8N6K4 173 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 C3orf56Q8N813 242 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 LINC01620Q4KN68 170 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 SUMO4Q6EEV6 95 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 TMEM219Q86XT9 240 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 TTC28Q96AY4 2481 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 IGIPA6NJ69 53 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 VCYO14598 125 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 ATXN8Q156A1 80 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 DCHS2Q6V1P9 2916 aa7.74□□□□□ -1.17
LMX1A-201ENST00000294816 ZNF56Q15929 161 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 FAM159AQ6UWV7 190 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 IGHV1-69DA0A0B4J2H0 117 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 IGHV3-11P01762 117 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 RNASE3P12724 160 aaKnown RBP7.73□□□□□ -1.17
LMX1A-201ENST00000294816 HERV-K104P63124 156 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 PIP4P1Q86T03 277 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 COL6A6A6NMZ7 2263 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 IGHV3OR16-10A0A075B7F0 116 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 C2orf82Q6UX34 121 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 UNQ9165/PRO28630Q6UXU0 137 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 TMEM141Q96I45 108 aa7.73□□□□□ -1.17
LMX1A-201ENST00000294816 OVOL1O14753 267 aa7.72□□□□□ -1.17
LMX1A-201ENST00000294816 IGKV3-20P01619 116 aa7.72□□□□□ -1.17
LMX1A-201ENST00000294816 TMEM263Q8WUH6 116 aaKnown RBP7.72□□□□□ -1.17
LMX1A-201ENST00000294816 ZNF580Q9UK33 172 aa7.72□□□□□ -1.17
LMX1A-201ENST00000294816 TRBV7-1A0A0A6YYK4 115 aa7.72□□□□□ -1.17
LMX1A-201ENST00000294816 H3BMM0 161 aa7.72□□□□□ -1.17
LMX1A-201ENST00000294816 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
LMX1A-201ENST00000294816 TRBV12-3P01733 135 aa7.72□□□□□ -1.17
LMX1A-201ENST00000294816 UBE2WQ96B02 151 aa7.72□□□□□ -1.17
LMX1A-201ENST00000294816 TRBV7-9A0A0J9YWB2 115 aa7.71□□□□□ -1.17
LMX1A-201ENST00000294816 A0A0J9YXV3 536 aa7.71□□□□□ -1.17
LMX1A-201ENST00000294816 ZFP36P26651 326 aaKnown RBP7.71□□□□□ -1.17
LMX1A-201ENST00000294816 TLN1Q9Y490 2541 aaKnown RBP7.71□□□□□ -1.17
LMX1A-201ENST00000294816 TRAV12-3A0A0B4J271 114 aa7.71□□□□□ -1.18
LMX1A-201ENST00000294816 MINOS1Q5TGZ0 78 aa7.71□□□□□ -1.18
LMX1A-201ENST00000294816 SPXQ9BT56 116 aa7.71□□□□□ -1.18
LMX1A-201ENST00000294816 LENEPQ9Y5L5 61 aa7.71□□□□□ -1.18
LMX1A-201ENST00000294816 MINOS1-NBL1R4GNA1 71 aa7.71□□□□□ -1.18
LMX1A-201ENST00000294816 SAA4P35542 130 aa7.71□□□□□ -1.18
LMX1A-201ENST00000294816 ZNF876PQ49A33 203 aa7.71□□□□□ -1.18
LMX1A-201ENST00000294816 MUC4Q99102 2169 aa7.71□□□□□ -1.18
LMX1A-201ENST00000294816 OOSP1A8MZH6 123 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 ITLN2Q8WWU7 325 aaPredicted RBP7.7□□□□□ -1.18
LMX1A-201ENST00000294816 TIMM17AQ99595 171 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 AKAP13Q12802 2813 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.7□□□□□ -1.18
LMX1A-201ENST00000294816 CENPVL3A0A0U1RRI6 287 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 LEPROTO15243 131 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 TRIAP1O43715 76 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 POLR2KP53803 58 aaKnown RBP7.7□□□□□ -1.18
LMX1A-201ENST00000294816 EBI3Q14213 229 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 SHISA2Q6UWI4 295 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 AMELXQ99217 191 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 SVEP1Q4LDE5 3571 aa7.7□□□□□ -1.18
LMX1A-201ENST00000294816 ASH1LQ9NR48 2969 aaKnown RBP7.7□□□□□ -1.18
LMX1A-201ENST00000294816 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
LMX1A-201ENST00000294816 Q8NA96 180 aa7.69□□□□□ -1.18
LMX1A-201ENST00000294816 DUX3Q96PT4 197 aa7.69□□□□□ -1.18
LMX1A-201ENST00000294816 ODF3Q96PU9 254 aa7.69□□□□□ -1.18
LMX1A-201ENST00000294816 RPL32P62910 135 aaKnown RBP7.69□□□□□ -1.18
LMX1A-201ENST00000294816 RNASE13Q5GAN3 156 aaKnown RBP7.69□□□□□ -1.18
LMX1A-201ENST00000294816 Q6ZSV7 163 aa7.69□□□□□ -1.18
LMX1A-201ENST00000294816 CLEC2BQ92478 149 aa7.69□□□□□ -1.18
LMX1A-201ENST00000294816 UBTD1Q9HAC8 227 aa7.69□□□□□ -1.18
LMX1A-201ENST00000294816 U3KQE9 123 aa7.69□□□□□ -1.18
LMX1A-201ENST00000294816 TRAV41A0A0B4J266 112 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 A0A0B4J2C4 111 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 TRBV10-2A0A0K0K1G8 114 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 LINC00315P59091 139 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 FOXC1Q12948 553 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 SPTAN1Q13813 2472 aaKnown RBP7.68□□□□□ -1.18
LMX1A-201ENST00000294816 TMEM223A0PJW6 202 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 M0R2P5 195 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 ZNF22P17026 224 aaPredicted RBP7.68□□□□□ -1.18
LMX1A-201ENST00000294816 P0DMU3 169 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 FAM231AP0DMU4 169 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 FAM231CP0DMU5 169 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 UBE2E1P51965 193 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 KIF25-AS1Q9Y6Z4 181 aa7.68□□□□□ -1.18
LMX1A-201ENST00000294816 ZFHX2Q9C0A1 2572 aaPredicted RBP7.67□□□□□ -1.18
LMX1A-201ENST00000294816 TRAV12-2A0A075B6T6 113 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 TRAV8-3A0A0A6YYJ7 113 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 A0A0J9YXY3 114 aa7.67□□□□□ -1.18
LMX1A-201ENST00000294816 COX6CP09669 75 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms