RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 HIF1ANQ9NWT6 349 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 TRBV20-1A0A075B6N2 111 aa8.59□□□□□ -1.03
SCLT1-201ENST00000281142 MGPP08493 103 aa8.59□□□□□ -1.03
SCLT1-201ENST00000281142 DEFB113Q30KQ7 82 aa8.59□□□□□ -1.03
SCLT1-201ENST00000281142 RBAKDNA6NC62 111 aa8.59□□□□□ -1.03
SCLT1-201ENST00000281142 Q6ZS46 218 aa8.59□□□□□ -1.03
SCLT1-201ENST00000281142 VMO1Q7Z5L0 202 aa8.59□□□□□ -1.03
SCLT1-201ENST00000281142 C20orf173Q96LM9 149 aa8.59□□□□□ -1.03
SCLT1-201ENST00000281142 NAV2Q8IVL1 2488 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 LINC01619G3V211 115 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 DUSP14O95147 198 aaKnown RBP8.58□□□□□ -1.04
SCLT1-201ENST00000281142 SRD5A1P18405 259 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 UBE2D1P51668 147 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 UBE2D3P61077 147 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 UBE2D2P62837 147 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 Q8N6K4 173 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 ATP6V0E1O15342 81 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 NDUFV3P56181 108 aaKnown RBP8.58□□□□□ -1.04
SCLT1-201ENST00000281142 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 Q8N9W7 124 aa8.58□□□□□ -1.04
SCLT1-201ENST00000281142 BEX4Q9NWD9 120 aaPredicted RBP8.58□□□□□ -1.04
SCLT1-201ENST00000281142 RHODO00212 210 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 TCL1BO95988 128 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 CD7P09564 240 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 SLC50A1Q9BRV3 221 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 BPESC1Q9GZL8 116 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 IGHV4-4A0A075B6R2 117 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 C11orf86A6NJI1 115 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 CRYGDP07320 174 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 MUC4Q99102 2169 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 GAGE12JA6NER3 117 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 GAGE7O76087 117 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 GAGE12FP0CL80 117 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 GAGE12GP0CL81 117 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 GAGE12IP0CL82 117 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 PRTN3P24158 256 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 TSPEAR-AS2P59090 65 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 GAGE4Q13068 117 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 ORMDL2Q53FV1 153 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 C10orf105Q8TEF2 133 aa8.57□□□□□ -1.04
SCLT1-201ENST00000281142 IGHV4-30-2A0A087WSY4 118 aa8.56□□□□□ -1.04
SCLT1-201ENST00000281142 TSHBP01222 138 aa8.56□□□□□ -1.04
SCLT1-201ENST00000281142 TIMD4Q96H15 378 aa8.56□□□□□ -1.04
SCLT1-201ENST00000281142 TRAV4A0A0B4J268 109 aa8.56□□□□□ -1.04
SCLT1-201ENST00000281142 CRLF1O75462 422 aa8.56□□□□□ -1.04
SCLT1-201ENST00000281142 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
SCLT1-201ENST00000281142 LRRC75A-AS1Q8N1F1 130 aa8.56□□□□□ -1.04
SCLT1-201ENST00000281142 VCX2Q9H322 139 aa8.56□□□□□ -1.04
SCLT1-201ENST00000281142 LINC00527Q9UJ94 153 aa8.56□□□□□ -1.04
SCLT1-201ENST00000281142 A8MWV9 139 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 GNRH2O43555 120 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 C9orf47Q6ZRZ4 202 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 NDUFA11Q86Y39 141 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 SBSPONQ8IVN8 264 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 C16orf92Q96LL3 132 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 F6UB75 175 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 SCGB2A1O75556 95 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 S100A4P26447 101 aaKnown RBP8.55□□□□□ -1.04
SCLT1-201ENST00000281142 RPL39P62891 51 aaKnown RBP8.55□□□□□ -1.04
SCLT1-201ENST00000281142 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 A0A0J9YY99 117 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 ZFP36P26651 326 aaKnown RBP8.55□□□□□ -1.04
SCLT1-201ENST00000281142 ARL3P36405 182 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 GAGE2EQ4V326 116 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 PIMREGQ9BSJ6 248 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 GAGE2DQ9UEU5 116 aa8.55□□□□□ -1.04
SCLT1-201ENST00000281142 FLNBO75369 2602 aaKnown RBP8.55□□□□□ -1.04
SCLT1-201ENST00000281142 SETXQ7Z333 2677 aaKnown RBP8.54□□□□□ -1.04
SCLT1-201ENST00000281142 ZFAND2AQ8N6M9 145 aa8.54□□□□□ -1.04
SCLT1-201ENST00000281142 FAM110DQ8TAY7 271 aaPredicted RBP8.54□□□□□ -1.04
SCLT1-201ENST00000281142 JPT2Q9H910 190 aa8.54□□□□□ -1.04
SCLT1-201ENST00000281142 TNFRSF18Q9Y5U5 241 aa8.54□□□□□ -1.04
SCLT1-201ENST00000281142 IGKV3-7A0A075B6H7 116 aa8.54□□□□□ -1.04
SCLT1-201ENST00000281142 TMEM262E9PQX1 116 aa8.54□□□□□ -1.04
SCLT1-201ENST00000281142 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
SCLT1-201ENST00000281142 CFC1P0CG37 223 aa8.54□□□□□ -1.04
SCLT1-201ENST00000281142 DPH3P1Q9H4G8 78 aa8.54□□□□□ -1.04
SCLT1-201ENST00000281142 PHLDA3Q9Y5J5 127 aa8.54□□□□□ -1.04
SCLT1-201ENST00000281142 CRIP2P52943 208 aaPredicted RBP8.53□□□□□ -1.04
SCLT1-201ENST00000281142 METTL26Q96S19 204 aa8.53□□□□□ -1.04
SCLT1-201ENST00000281142 OTOGQ6ZRI0 2925 aa8.53□□□□□ -1.04
SCLT1-201ENST00000281142 ZANQ9Y493 2812 aa8.53□□□□□ -1.04
SCLT1-201ENST00000281142 IGHV4-61A0A0C4DH41 118 aa8.53□□□□□ -1.04
SCLT1-201ENST00000281142 GPHB5Q86YW7 130 aa8.53□□□□□ -1.04
SCLT1-201ENST00000281142 TP53TG1Q9Y2A0 90 aa8.53□□□□□ -1.04
SCLT1-201ENST00000281142 ABCA2Q9BZC7 2435 aa8.53□□□□□ -1.04
SCLT1-201ENST00000281142 PRRC2AP48634 2157 aaKnown RBP8.53□□□□□ -1.04
SCLT1-201ENST00000281142 M0R1W7 72 aa8.52□□□□□ -1.04
SCLT1-201ENST00000281142 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.04
SCLT1-201ENST00000281142 DSCR9P59020 149 aa8.52□□□□□ -1.04
SCLT1-201ENST00000281142 SNCGO76070 127 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 RNASE4P34096 147 aaKnown RBP8.52□□□□□ -1.05
SCLT1-201ENST00000281142 LMO4P61968 165 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 EBI3Q14213 229 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 FAM159AQ6UWV7 190 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 RAX2Q96IS3 184 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 CR1P17927 2039 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 CCDC168Q8NDH2 2452 aa8.52□□□□□ -1.05
SCLT1-201ENST00000281142 ITPR3Q14573 2671 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms