RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 A8MWV9 139 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 EDN2P20800 178 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 TEN1Q86WV5 123 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 GPHB5Q86YW7 130 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 ZNRF2Q8NHG8 242 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 PPDPFLQ8WWR9 84 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 RNASE3P12724 160 aaKnown RBP9.73□□□□□ -0.85
COL8A1-202ENST00000273342 Q1RN00 199 aa9.73□□□□□ -0.85
COL8A1-202ENST00000273342 C1orf122Q6ZSJ8 110 aa9.73□□□□□ -0.85
COL8A1-202ENST00000273342 SS18L2Q9UHA2 77 aa9.73□□□□□ -0.85
COL8A1-202ENST00000273342 UBE2D3P61077 147 aa9.73□□□□□ -0.85
COL8A1-202ENST00000273342 UBE2D2P62837 147 aa9.73□□□□□ -0.85
COL8A1-202ENST00000273342 LY6DQ14210 128 aa9.73□□□□□ -0.85
COL8A1-202ENST00000273342 ZNF580Q9UK33 172 aa9.73□□□□□ -0.85
COL8A1-202ENST00000273342 IGHV4-39P01824 125 aa9.72□□□□□ -0.85
COL8A1-202ENST00000273342 HERVK_113P61574 105 aa9.72□□□□□ -0.85
COL8A1-202ENST00000273342 BRD3OSQ6XYD6 125 aa9.72□□□□□ -0.85
COL8A1-202ENST00000273342 CELSR2Q9HCU4 2923 aa9.72□□□□□ -0.85
COL8A1-202ENST00000273342 UTP20O75691 2785 aaKnown RBP9.72□□□□□ -0.85
COL8A1-202ENST00000273342 A4D1N5 150 aa9.72□□□□□ -0.85
COL8A1-202ENST00000273342 EBI3Q14213 229 aa9.72□□□□□ -0.85
COL8A1-202ENST00000273342 LY6EQ16553 131 aa9.72□□□□□ -0.85
COL8A1-202ENST00000273342 ANAPC13Q9BS18 74 aa9.72□□□□□ -0.85
COL8A1-202ENST00000273342 MYO18BQ8IUG5 2567 aa9.71□□□□□ -0.85
COL8A1-202ENST00000273342 PTPN13Q12923 2485 aa9.71□□□□□ -0.85
COL8A1-202ENST00000273342 TRBV20-1A0A075B6N2 111 aa9.71□□□□□ -0.85
COL8A1-202ENST00000273342 TRAV12-3A0A0B4J271 114 aa9.71□□□□□ -0.85
COL8A1-202ENST00000273342 IGHV3-30P01768 117 aa9.71□□□□□ -0.85
COL8A1-202ENST00000273342 IGHV3-30-5P0DP03 117 aa9.71□□□□□ -0.85
COL8A1-202ENST00000273342 PMVKQ15126 192 aa9.71□□□□□ -0.85
COL8A1-202ENST00000273342 SDHAF1A6NFY7 115 aa9.71□□□□□ -0.86
COL8A1-202ENST00000273342 ELANEP08246 267 aa9.71□□□□□ -0.86
COL8A1-202ENST00000273342 LGALS3P17931 250 aaKnown RBP9.71□□□□□ -0.86
COL8A1-202ENST00000273342 NPC2P61916 151 aa9.71□□□□□ -0.86
COL8A1-202ENST00000273342 SUMO4Q6EEV6 95 aa9.71□□□□□ -0.86
COL8A1-202ENST00000273342 C9orf139Q6ZV77 190 aa9.71□□□□□ -0.86
COL8A1-202ENST00000273342 C10orf126Q8N4M7 172 aa9.71□□□□□ -0.86
COL8A1-202ENST00000273342 LINC00477Q96M19 166 aa9.71□□□□□ -0.86
COL8A1-202ENST00000273342 PRO1854Q9UHT4 67 aa9.71□□□□□ -0.86
COL8A1-202ENST00000273342 ZNF688P0C7X2 276 aa9.7□□□□□ -0.86
COL8A1-202ENST00000273342 MINOS1Q5TGZ0 78 aa9.7□□□□□ -0.86
COL8A1-202ENST00000273342 IGF2-ASQ6U949 168 aa9.7□□□□□ -0.86
COL8A1-202ENST00000273342 MINOS1-NBL1R4GNA1 71 aa9.7□□□□□ -0.86
COL8A1-202ENST00000273342 USP9XQ93008 2570 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-202ENST00000273342 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
COL8A1-202ENST00000273342 TRBV7-1A0A0A6YYK4 115 aa9.7□□□□□ -0.86
COL8A1-202ENST00000273342 J3QQQ9 107 aa9.7□□□□□ -0.86
COL8A1-202ENST00000273342 ITLN2Q8WWU7 325 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-202ENST00000273342 SIRPDQ9H106 197 aa9.7□□□□□ -0.86
COL8A1-202ENST00000273342 TRAV41A0A0B4J266 112 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 CENPVL3A0A0U1RRI6 287 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 LINC01619G3V211 115 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 SLC25A20O43772 301 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 AJUBAQ96IF1 538 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 A0A1W2PPR1 153 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 IGIPA6NJ69 53 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 HTN1P15515 57 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 ATP6V0E2Q8NHE4 81 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 B5MCH6 92 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 PRSS2P07478 247 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 RNASE13Q5GAN3 156 aaKnown RBP9.69□□□□□ -0.86
COL8A1-202ENST00000273342 FAM159AQ6UWV7 190 aa9.69□□□□□ -0.86
COL8A1-202ENST00000273342 K7ENP7 123 aa9.68□□□□□ -0.86
COL8A1-202ENST00000273342 ZNF56Q15929 161 aa9.68□□□□□ -0.86
COL8A1-202ENST00000273342 SLC25A29Q8N8R3 303 aa9.68□□□□□ -0.86
COL8A1-202ENST00000273342 NTN5Q8WTR8 489 aaPredicted RBP9.68□□□□□ -0.86
COL8A1-202ENST00000273342 U3KQE9 123 aa9.68□□□□□ -0.86
COL8A1-202ENST00000273342 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
COL8A1-202ENST00000273342 PF4V1P10720 104 aa9.68□□□□□ -0.86
COL8A1-202ENST00000273342 LYRM7Q5U5X0 104 aa9.68□□□□□ -0.86
COL8A1-202ENST00000273342 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
COL8A1-202ENST00000273342 TEX29Q8N6K0 151 aa9.68□□□□□ -0.86
COL8A1-202ENST00000273342 MRPL53Q96EL3 112 aaKnown RBP9.68□□□□□ -0.86
COL8A1-202ENST00000273342 CRLF1O75462 422 aa9.67□□□□□ -0.86
COL8A1-202ENST00000273342 C2CD3Q4AC94 2353 aa9.67□□□□□ -0.86
COL8A1-202ENST00000273342 OOSP1A8MZH6 123 aa9.67□□□□□ -0.86
COL8A1-202ENST00000273342 LINC00315P59091 139 aa9.67□□□□□ -0.86
COL8A1-202ENST00000273342 ZFAND6Q6FIF0 208 aa9.67□□□□□ -0.86
COL8A1-202ENST00000273342 C5orf56Q8N8D9 126 aa9.67□□□□□ -0.86
COL8A1-202ENST00000273342 BPESC1Q9GZL8 116 aa9.67□□□□□ -0.86
COL8A1-202ENST00000273342 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 UBE2E1P51965 193 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 ADORA2A-AS1P86434 159 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 Q6ZSV7 163 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 RHPN1-AS1Q9BWJ2 59 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 NACAE9PAV3 2078 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 FLNCQ14315 2725 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 TRAV4A0A0B4J268 109 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 A0A0J9YXV3 536 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 TEX49A0A1B0GTD5 131 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 OVOL1O14753 267 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 SPXQ9BT56 116 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 MDFICQ9P1T7 246 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 KLK9Q9UKQ9 250 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 SONP18583 2426 aaKnown RBP9.66□□□□□ -0.86
COL8A1-202ENST00000273342 ERG28Q9UKR5 140 aa9.66□□□□□ -0.86
COL8A1-202ENST00000273342 MYO9AB2RTY4 2548 aa9.65□□□□□ -0.86
COL8A1-202ENST00000273342 ZANQ9Y493 2812 aa9.65□□□□□ -0.86
COL8A1-202ENST00000273342 VCYO14598 125 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms