RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 FAM120AOSQ5T036 256 aa6.27□□□□□ -1.41
LIMD1-201ENST00000273317 ZFP2Q6ZN57 461 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 ZNRD1Q9P1U0 126 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 LTBP2Q14767 1821 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 TPSG1Q9NRR2 321 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 TRBV6-1A0A0K0K1D8 114 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 CTRLP40313 264 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 TIRAPP58753 221 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 VSIG2Q96IQ7 327 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 NOP10Q9NPE3 64 aaKnown RBP6.26□□□□□ -1.41
LIMD1-201ENST00000273317 COX7A2LO14548 114 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 ZMAT4Q9H898 229 aa6.26□□□□□ -1.41
LIMD1-201ENST00000273317 TRAV4A0A0B4J268 109 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 CCL25O15444 150 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 PCP2Q8IVA1 136 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 ZNF491Q8N8L2 437 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 AMTNQ6UX39 209 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 RNF183Q96D59 192 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 LY6HO94772 140 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 PSMB8P28062 276 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 KRTAP27-1Q3LI81 207 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 TOMM6Q96B49 74 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 JMJD7-PLA2G4BH0Y9G9 81 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 H3BT86 120 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 CGB7P0DN87 165 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 SND1-IT1Q9HBX3 110 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 PIEZO1Q92508 2521 aa6.25□□□□□ -1.41
LIMD1-201ENST00000273317 A0A1B0GX51 115 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 LHBP01229 141 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 AGPAT4-IT1Q9H0P7 198 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 PIFOQ8TCI5 191 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 COL4A6Q14031 1691 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 Q96MF0 132 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 PROK2Q9HC23 129 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 F8P00451 2351 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-201ENST00000273317 IGKV2-29A2NJV5 120 aaPredicted RBP6.24□□□□□ -1.41
LIMD1-201ENST00000273317 RPL18AQ02543 176 aaKnown RBP6.24□□□□□ -1.41
LIMD1-201ENST00000273317 CDPF1Q6NVV7 123 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 DKK4Q9UBT3 224 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 CPAMD8Q8IZJ3 1885 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 TIMM17AQ99595 171 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 ATP5EP2Q5VTU8 51 aa6.24□□□□□ -1.41
LIMD1-201ENST00000273317 LY6G6EA0A0G2JKS1 128 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 U3KQA8 63 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 MTORP42345 2549 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 IGKV2D-24A0A075B6R9 120 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 C11orf86A6NJI1 115 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 NDUFA1O15239 70 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 GYPEP15421 78 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 C9orf47Q6ZRZ4 202 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 NREPQ16612 68 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 C14orf132Q9NPU4 83 aa6.23□□□□□ -1.41
LIMD1-201ENST00000273317 A0A096LPF7 62 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 GNRH2O43555 120 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 C9orf66Q5T8R8 295 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 SP5Q6BEB4 398 aaPredicted RBP6.22□□□□□ -1.41
LIMD1-201ENST00000273317 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 FLG2Q5D862 2391 aaPredicted RBP6.22□□□□□ -1.41
LIMD1-201ENST00000273317 POLQO75417 2590 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 TRBV7-3A0A075B6L6 115 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 I3L2K1 104 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 LGALS9O00182 355 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 RPL39LQ96EH5 51 aaKnown RBP6.22□□□□□ -1.41
LIMD1-201ENST00000273317 IGHV4OR15-8A0A075B7B6 117 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 A0A087WW49 117 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 TMEM89A2RUT3 159 aa6.22□□□□□ -1.41
LIMD1-201ENST00000273317 CCL24O00175 119 aa6.21□□□□□ -1.41
LIMD1-201ENST00000273317 BUB3O43684 328 aa6.21□□□□□ -1.41
LIMD1-201ENST00000273317 FAM215AQ9Y5M1 114 aa6.21□□□□□ -1.41
LIMD1-201ENST00000273317 TRBV10-2A0A0K0K1G8 114 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 IGLV11-55A0A075B6I3 123 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 IGKV1OR2-108A0A075B7D4 117 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 PRR30Q53SZ7 412 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-201ENST00000273317 Q8N1Y9 231 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 PTPRSQ13332 1948 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 A4D1N5 150 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 TMEM256-PLSCR3K7ERE1 68 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 MUSTN1Q8IVN3 82 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 E9PLD3 99 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 C16orf54Q6UWD8 224 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 TM2D2Q9BX73 214 aa6.21□□□□□ -1.42
LIMD1-201ENST00000273317 SPRY2O43597 315 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 RSPO1Q2MKA7 263 aaPredicted RBP6.2□□□□□ -1.42
LIMD1-201ENST00000273317 HIST2H2BCQ6DN03 193 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 Q6ZQT7 251 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 K7EIM0 57 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 SPART-AS1P0CW21 52 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 FOXI1Q12951 378 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 PROP1O75360 226 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 ZNF503-AS2A6NEH8 195 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 K7EMT4 169 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 IGHV1-58A0A0C4DH39 117 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 C11orf53Q8IXP5 236 aa6.2□□□□□ -1.42
LIMD1-201ENST00000273317 G3V4G9 280 aa6.19□□□□□ -1.42
LIMD1-201ENST00000273317 IGF2-ASQ6U949 168 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms