RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 A6NDN8 102 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 H3BMM0 161 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 H3BRM9 83 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 CRLF1O75462 422 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 KIR3DS1Q14943 382 aa10.88□□□□□ -0.67
PDLIM2-201ENST00000265810 TP53TG1Q9Y2A0 90 aa10.87□□□□□ -0.67
PDLIM2-201ENST00000265810 I3L3M4 83 aa10.87□□□□□ -0.67
PDLIM2-201ENST00000265810 DSCAML1Q8TD84 2053 aa10.86□□□□□ -0.67
PDLIM2-201ENST00000265810 IGLV2-11P01706 119 aa10.86□□□□□ -0.67
PDLIM2-201ENST00000265810 CRIP1P50238 77 aa10.86□□□□□ -0.67
PDLIM2-201ENST00000265810 OR5A1Q8NGJ0 315 aa10.86□□□□□ -0.67
PDLIM2-201ENST00000265810 IGHV1-24A0A0C4DH33 117 aa10.86□□□□□ -0.67
PDLIM2-201ENST00000265810 ESM1Q9NQ30 184 aa10.86□□□□□ -0.67
PDLIM2-201ENST00000265810 IGHV3-64A0A075B6Q5 118 aa10.86□□□□□ -0.67
PDLIM2-201ENST00000265810 ZNF493Q6ZR52 646 aa10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 TRBV7-9A0A0J9YWB2 115 aa10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 CTRLP40313 264 aa10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 CIRBPQ14011 172 aaKnown RBP10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 DEFB135Q30KP9 77 aa10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 TEX43Q6ZNM6 134 aa10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 hDV102S1A0JD36 115 aa10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 PSMB2P49721 201 aa10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 MRPS12O15235 138 aaKnown RBP10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 RPL39LQ96EH5 51 aaKnown RBP10.85□□□□□ -0.67
PDLIM2-201ENST00000265810 MAP1AP78559 2803 aaPredicted RBP10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 NDUFA7O95182 113 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 ZFAND2AQ8N6M9 145 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 C20orf78Q9BR46 151 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 MUC3AQ02505 3323 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 TP53TG3Q9ULZ0 132 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 FLNAP21333 2647 aaKnown RBP10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 A0A096LPF7 62 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 BRI3O95415 125 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 IGLL1P15814 213 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 Q6ZWC4 215 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 ZNF580Q9UK33 172 aa10.84□□□□□ -0.67
PDLIM2-201ENST00000265810 USP34Q70CQ2 3546 aa10.83□□□□□ -0.68
PDLIM2-201ENST00000265810 TRAV13-1A0A0B4J241 112 aa10.83□□□□□ -0.68
PDLIM2-201ENST00000265810 JPT2Q9H910 190 aa10.83□□□□□ -0.68
PDLIM2-201ENST00000265810 ITPR3Q14573 2671 aa10.83□□□□□ -0.68
PDLIM2-201ENST00000265810 COL5A1-AS1Q5SY13 56 aa10.83□□□□□ -0.68
PDLIM2-201ENST00000265810 DCANP1Q8TF63 244 aa10.83□□□□□ -0.68
PDLIM2-201ENST00000265810 C16orf74Q96GX8 76 aa10.83□□□□□ -0.68
PDLIM2-201ENST00000265810 SUMO4Q6EEV6 95 aa10.82□□□□□ -0.68
PDLIM2-201ENST00000265810 H7C2G1 150 aa10.82□□□□□ -0.68
PDLIM2-201ENST00000265810 DEFB4AO15263 64 aa10.82□□□□□ -0.68
PDLIM2-201ENST00000265810 NUPR1O60356 82 aa10.82□□□□□ -0.68
PDLIM2-201ENST00000265810 ZC2HC1BQ5TFG8 222 aa10.82□□□□□ -0.68
PDLIM2-201ENST00000265810 RAB37Q96AX2 223 aa10.82□□□□□ -0.68
PDLIM2-201ENST00000265810 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
PDLIM2-201ENST00000265810 A6NJY4 79 aa10.82□□□□□ -0.68
PDLIM2-201ENST00000265810 NDUFAF3Q9BU61 184 aa10.81□□□□□ -0.68
PDLIM2-201ENST00000265810 A0A0J9YY99 117 aa10.81□□□□□ -0.68
PDLIM2-201ENST00000265810 CRPP02741 224 aa10.81□□□□□ -0.68
PDLIM2-201ENST00000265810 ODF3Q96PU9 254 aa10.81□□□□□ -0.68
PDLIM2-201ENST00000265810 MALP21145 153 aa10.8□□□□□ -0.68
PDLIM2-201ENST00000265810 SHISA2Q6UWI4 295 aa10.8□□□□□ -0.68
PDLIM2-201ENST00000265810 PAX4O43316 350 aa10.8□□□□□ -0.68
PDLIM2-201ENST00000265810 TRBV25-1A0A075B6N4 114 aa10.8□□□□□ -0.68
PDLIM2-201ENST00000265810 MED14OSP0DP75 135 aa10.8□□□□□ -0.68
PDLIM2-201ENST00000265810 TRAV2A0A0B4J234 112 aa10.8□□□□□ -0.68
PDLIM2-201ENST00000265810 IGLC6P0CF74 106 aa10.8□□□□□ -0.68
PDLIM2-201ENST00000265810 STPG4Q8N801 248 aa10.8□□□□□ -0.68
PDLIM2-201ENST00000265810 C20orf144Q9BQM9 153 aa10.8□□□□□ -0.68
PDLIM2-201ENST00000265810 LINC00482Q8N8I6 264 aa10.79□□□□□ -0.68
PDLIM2-201ENST00000265810 WFDC10AQ9H1F0 79 aa10.79□□□□□ -0.68
PDLIM2-201ENST00000265810 A0A1B0GXF2 115 aa10.79□□□□□ -0.68
PDLIM2-201ENST00000265810 PLNP26678 52 aa10.79□□□□□ -0.68
PDLIM2-201ENST00000265810 COA6Q5JTJ3 125 aaKnown RBP10.79□□□□□ -0.68
PDLIM2-201ENST00000265810 CRXO43186 299 aaPredicted RBP10.79□□□□□ -0.68
PDLIM2-201ENST00000265810 RHOHQ15669 191 aa10.79□□□□□ -0.68
PDLIM2-201ENST00000265810 ZNF815PA8K554 130 aa10.79□□□□□ -0.68
PDLIM2-201ENST00000265810 RNF151Q2KHN1 245 aa10.78□□□□□ -0.68
PDLIM2-201ENST00000265810 C16orf95Q9H693 158 aa10.78□□□□□ -0.68
PDLIM2-201ENST00000265810 PRR9Q5T870 116 aa10.78□□□□□ -0.68
PDLIM2-201ENST00000265810 GAGE6Q13070 117 aa10.78□□□□□ -0.68
PDLIM2-201ENST00000265810 CHD6Q8TD26 2715 aa10.77□□□□□ -0.68
PDLIM2-201ENST00000265810 A0A0U1RRA0 63 aa10.77□□□□□ -0.68
PDLIM2-201ENST00000265810 SNCGO76070 127 aa10.77□□□□□ -0.68
PDLIM2-201ENST00000265810 TMEM243Q9BU79 118 aa10.77□□□□□ -0.68
PDLIM2-201ENST00000265810 ZMAT4Q9H898 229 aa10.77□□□□□ -0.68
PDLIM2-201ENST00000265810 ZNF664Q8N3J9 261 aa10.77□□□□□ -0.69
PDLIM2-201ENST00000265810 CFAP161Q6P656 301 aa10.77□□□□□ -0.69
PDLIM2-201ENST00000265810 TMEM263Q8WUH6 116 aaKnown RBP10.77□□□□□ -0.69
PDLIM2-201ENST00000265810 SPART-AS1P0CW21 52 aa10.77□□□□□ -0.69
PDLIM2-201ENST00000265810 C11orf21Q9P2W6 132 aa10.76□□□□□ -0.69
PDLIM2-201ENST00000265810 ATMQ13315 3056 aa10.76□□□□□ -0.69
PDLIM2-201ENST00000265810 A0A096LNT2 108 aa10.76□□□□□ -0.69
PDLIM2-201ENST00000265810 LYRM7Q5U5X0 104 aa10.76□□□□□ -0.69
PDLIM2-201ENST00000265810 UBE2DNLQ8IWF7 75 aa10.76□□□□□ -0.69
PDLIM2-201ENST00000265810 PMVKQ15126 192 aa10.76□□□□□ -0.69
PDLIM2-201ENST00000265810 ERASQ7Z444 233 aa10.76□□□□□ -0.69
PDLIM2-201ENST00000265810 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
PDLIM2-201ENST00000265810 LOC107984156A0A0G2JMH3 177 aa10.75□□□□□ -0.69
PDLIM2-201ENST00000265810 SEC11AP67812 179 aa10.75□□□□□ -0.69
PDLIM2-201ENST00000265810 ARL17AQ8IVW1 177 aa10.75□□□□□ -0.69
PDLIM2-201ENST00000265810 ZNF747Q9BV97 191 aa10.75□□□□□ -0.69
PDLIM2-201ENST00000265810 RNASE13Q5GAN3 156 aaKnown RBP10.75□□□□□ -0.69
PDLIM2-201ENST00000265810 Q6ZQT7 251 aa10.75□□□□□ -0.69
PDLIM2-201ENST00000265810 FSHBP01225 129 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms