RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 TRAV10A0A0B4J240 114 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 A0A0J9YX75 114 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 A8MWP6 167 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 IGHV4-30-4P0DP06 118 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 Q6ZWC4 215 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 NHP2Q9NX24 153 aaKnown RBP4.82□□□□□ -1.64
BRIP1-201ENST00000259008 MED13LQ71F56 2210 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 LY6LH3BQJ8 138 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 TNRC18O15417 2968 aaPredicted RBP4.82□□□□□ -1.64
BRIP1-201ENST00000259008 CXCL1P09341 107 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 Q8N8P6 123 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 RPL39LQ96EH5 51 aaKnown RBP4.82□□□□□ -1.64
BRIP1-201ENST00000259008 MDFICQ9P1T7 246 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 TAL2Q16559 108 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 PATE2Q6UY27 113 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 Q6ZTI0 123 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 IGF2RP11717 2491 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 G3V4G9 280 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 SNHG12Q9BXW3 62 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 U3KQK5 164 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 DNAH14Q0VDD8 3507 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 UBE2AP49459 152 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 DAZ2Q13117 558 aaKnown RBP4.81□□□□□ -1.64
BRIP1-201ENST00000259008 DAZ4Q86SG3 579 aaKnown RBP4.81□□□□□ -1.64
BRIP1-201ENST00000259008 DAZ3Q9NR90 486 aaKnown RBP4.81□□□□□ -1.64
BRIP1-201ENST00000259008 PRO0255Q9UI72 69 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 BRI3O95415 125 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 TIMM17AQ99595 171 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 COX7A2LO14548 114 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 FSTL3O95633 263 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 HIGD2BQ4VC39 106 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 PET117Q6UWS5 81 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 HERVK_113P63121 156 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 ATRAIDQ6UW56 229 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 LAMTOR2Q9Y2Q5 125 aa4.81□□□□□ -1.64
BRIP1-201ENST00000259008 ACACBO00763 2458 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 WDR87Q6ZQQ6 2873 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 TRBV7-3A0A075B6L6 115 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 LECT2O14960 151 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 NPYP01303 97 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 GATA1P15976 413 aaPredicted RBP4.8□□□□□ -1.64
BRIP1-201ENST00000259008 SCRT2Q9NQ03 307 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 NOTCH2Q04721 2471 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 TRAV4A0A0B4J268 109 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 MIFP14174 115 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 LYPD6BQ8NI32 183 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 CTAG1AP78358 180 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 LYRM9A8MSI8 78 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 FRMD6-AS1P0C7T7 363 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 ESDP10768 282 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 C9orf47Q6ZRZ4 202 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 C20orf173Q96LM9 149 aa4.8□□□□□ -1.64
BRIP1-201ENST00000259008 ATG2AQ2TAZ0 1938 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 GDF5OSQ5U4N7 250 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 DNAJC30Q96LL9 226 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 ZNF747Q9BV97 191 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 LENEPQ9Y5L5 61 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 NCOA6Q14686 2063 aaPredicted RBP4.79□□□□□ -1.64
BRIP1-201ENST00000259008 ERG28Q9UKR5 140 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 LAMA1P25391 3075 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 SMIM6P0DI80 62 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 COL5A1-AS1Q5SY13 56 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 VCANP13611 3396 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 P0DMU3 169 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 FAM231AP0DMU4 169 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 FAM231CP0DMU5 169 aa4.79□□□□□ -1.64
BRIP1-201ENST00000259008 RPL32P62910 135 aaKnown RBP4.79□□□□□ -1.64
BRIP1-201ENST00000259008 GAGE12HA6NDE8 117 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 SMIM9A6NGZ8 99 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 C4orf48Q5BLP8 95 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 SMIM2Q9BVW6 85 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 TTC32Q5I0X7 151 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 COL4A2P08572 1712 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 NUPR2A6NF83 97 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 EDN2P20800 178 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 DOCK11Q5JSL3 2073 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 Q0VG73 95 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 CFAP54Q96N23 3096 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 ETDCA0A1B0GVM5 59 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 PLP1P60201 277 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 ZNF479Q96JC4 524 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 C20orf144Q9BQM9 153 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 LINC00574Q9H8X3 128 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 MSRB1Q9NZV6 116 aa4.78□□□□□ -1.64
BRIP1-201ENST00000259008 PTPRBP23467 1997 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 K7EN84 100 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 K7EQG2 157 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 EBI3Q14213 229 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 CT83Q5H943 113 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 V9GYV3 84 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 A0A087X0K7 114 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 SMIM27A0A1W2PRY6 76 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 NCR3O14931 201 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 SIVA1O15304 175 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 LINC00269Q8N2A0 174 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 C10orf126Q8N4M7 172 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 SPEGQ15772 3267 aa4.77□□□□□ -1.65
BRIP1-201ENST00000259008 NDUFA1O15239 70 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms