RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 IGHV3-11P01762 117 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 BLCAPP62952 87 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 ZFAND2AQ8N6M9 145 aa14.23□□□□□ -0.13
SNX4-201ENST00000251775 LENEPQ9Y5L5 61 aa14.22□□□□□ -0.13
SNX4-201ENST00000251775 EMP1P54849 157 aa14.22□□□□□ -0.13
SNX4-201ENST00000251775 PHLDA3Q9Y5J5 127 aa14.22□□□□□ -0.13
SNX4-201ENST00000251775 NDUFA4O00483 81 aa14.21□□□□□ -0.13
SNX4-201ENST00000251775 CFC1BP0CG36 223 aa14.21□□□□□ -0.13
SNX4-201ENST00000251775 CFC1P0CG37 223 aa14.21□□□□□ -0.13
SNX4-201ENST00000251775 S100A4P26447 101 aaKnown RBP14.21□□□□□ -0.13
SNX4-201ENST00000251775 C9orf139Q6ZV77 190 aa14.21□□□□□ -0.13
SNX4-201ENST00000251775 MSMBP08118 114 aa14.21□□□□□ -0.13
SNX4-201ENST00000251775 TRBV20-1A0A075B6N2 111 aa14.2□□□□□ -0.14
SNX4-201ENST00000251775 IGHV3-30P01768 117 aa14.2□□□□□ -0.14
SNX4-201ENST00000251775 IGHV3-30-5P0DP03 117 aa14.2□□□□□ -0.14
SNX4-201ENST00000251775 ASIPP42127 132 aa14.2□□□□□ -0.14
SNX4-201ENST00000251775 PIEZO1Q92508 2521 aa14.2□□□□□ -0.14
SNX4-201ENST00000251775 COL12A1Q99715 3063 aa14.2□□□□□ -0.14
SNX4-201ENST00000251775 CFAP46Q8IYW2 2715 aa14.2□□□□□ -0.14
SNX4-201ENST00000251775 TRAV21A0A0B4J279 112 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 A8MWV9 139 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 TGFAP01135 160 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 AVPP01185 164 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 PF4V1P10720 104 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 TSPEAR-AS2P59090 65 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 DEFB1P60022 68 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 ANXA2RQ3ZCQ2 193 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 ERG28Q9UKR5 140 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 SOCS3O14543 225 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 BRI3O95415 125 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 ZNF688P0C7X2 276 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 C10orf126Q8N4M7 172 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 RNF183Q96D59 192 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 USMG5Q96IX5 58 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 KIR2DL4Q99706 377 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 VCX2Q9H322 139 aa14.19□□□□□ -0.14
SNX4-201ENST00000251775 H3BUA1 57 aa14.18□□□□□ -0.14
SNX4-201ENST00000251775 HERVK_113P61574 105 aa14.18□□□□□ -0.14
SNX4-201ENST00000251775 ANKRD29Q8N6D5 301 aa14.18□□□□□ -0.14
SNX4-201ENST00000251775 LINC00477Q96M19 166 aa14.18□□□□□ -0.14
SNX4-201ENST00000251775 IGIPA6NJ69 53 aa14.18□□□□□ -0.14
SNX4-201ENST00000251775 SLC25A29Q8N8R3 303 aa14.18□□□□□ -0.14
SNX4-201ENST00000251775 TP53TG1Q9Y2A0 90 aa14.18□□□□□ -0.14
SNX4-201ENST00000251775 GATA3P23771 443 aa14.17□□□□□ -0.14
SNX4-201ENST00000251775 PAPPA-AS1Q5QFB9 102 aa14.17□□□□□ -0.14
SNX4-201ENST00000251775 NRGNQ92686 78 aa14.17□□□□□ -0.14
SNX4-201ENST00000251775 GNRH2O43555 120 aa14.16□□□□□ -0.14
SNX4-201ENST00000251775 PPP1R17O96001 155 aa14.16□□□□□ -0.14
SNX4-201ENST00000251775 RNASE3P12724 160 aaKnown RBP14.16□□□□□ -0.14
SNX4-201ENST00000251775 PMVKQ15126 192 aa14.16□□□□□ -0.14
SNX4-201ENST00000251775 POM121L12Q8N7R1 296 aa14.16□□□□□ -0.14
SNX4-201ENST00000251775 DEFB104AQ8WTQ1 72 aa14.16□□□□□ -0.14
SNX4-201ENST00000251775 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.16□□□□□ -0.144e-6■■■■□ 20.8
SNX4-201ENST00000251775 MED14OSP0DP75 135 aa14.16□□□□□ -0.14
SNX4-201ENST00000251775 AMELXQ99217 191 aa14.16□□□□□ -0.14
SNX4-201ENST00000251775 DOPEY1Q5JWR5 2465 aa14.16□□□□□ -0.14
SNX4-201ENST00000251775 PRO1854Q9UHT4 67 aa14.15□□□□□ -0.14
SNX4-201ENST00000251775 CACNA1AO00555 2505 aa14.15□□□□□ -0.14
SNX4-201ENST00000251775 IGLV1-40P01703 118 aa14.15□□□□□ -0.14
SNX4-201ENST00000251775 LINC00315P59091 139 aa14.15□□□□□ -0.14
SNX4-201ENST00000251775 IGKV3-7A0A075B6H7 116 aa14.14□□□□□ -0.15
SNX4-201ENST00000251775 SCGB1C2P0DMR2 95 aa14.14□□□□□ -0.15
SNX4-201ENST00000251775 RPL39P62891 51 aaKnown RBP14.14□□□□□ -0.15
SNX4-201ENST00000251775 RPL11P62913 178 aaKnown RBP14.14□□□□□ -0.15
SNX4-201ENST00000251775 OR10J6PQ8NGY7 276 aa14.14□□□□□ -0.15
SNX4-201ENST00000251775 KIF25-AS1Q9Y6Z4 181 aa14.14□□□□□ -0.15
SNX4-201ENST00000251775 USP9XQ93008 2570 aaPredicted RBP14.14□□□□□ -0.15
SNX4-201ENST00000251775 OVOL1O14753 267 aa14.14□□□□□ -0.15
SNX4-201ENST00000251775 RNASE4P34096 147 aaKnown RBP14.14□□□□□ -0.15
SNX4-201ENST00000251775 ZNRF2Q8NHG8 242 aa14.14□□□□□ -0.15
SNX4-201ENST00000251775 MUC4Q99102 2169 aa14.13□□□□□ -0.15
SNX4-201ENST00000251775 F6UB75 175 aa14.13□□□□□ -0.15
SNX4-201ENST00000251775 CSPG4Q6UVK1 2322 aa14.13□□□□□ -0.15
SNX4-201ENST00000251775 FLNCQ14315 2725 aa14.13□□□□□ -0.15
SNX4-201ENST00000251775 B4DSR2 109 aa14.13□□□□□ -0.15
SNX4-201ENST00000251775 RPL32P62910 135 aaKnown RBP14.13□□□□□ -0.15
SNX4-201ENST00000251775 CFHR3Q02985 330 aa14.13□□□□□ -0.15
SNX4-201ENST00000251775 TMEM170BQ5T4T1 132 aa14.13□□□□□ -0.15
SNX4-201ENST00000251775 FAM19A4Q96LR4 140 aa14.13□□□□□ -0.15
SNX4-201ENST00000251775 RHPN1-AS1Q9BWJ2 59 aa14.13□□□□□ -0.15
SNX4-201ENST00000251775 IGHV4OR15-8A0A075B7B6 117 aa14.12□□□□□ -0.15
SNX4-201ENST00000251775 A0A087WW49 117 aa14.12□□□□□ -0.15
SNX4-201ENST00000251775 EDN2P20800 178 aa14.12□□□□□ -0.15
SNX4-201ENST00000251775 POLR2KP53803 58 aaKnown RBP14.12□□□□□ -0.15
SNX4-201ENST00000251775 TMEM95Q3KNT9 176 aa14.12□□□□□ -0.15
SNX4-201ENST00000251775 IGSF10Q6WRI0 2623 aa14.12□□□□□ -0.15
SNX4-201ENST00000251775 ANAPC13Q9BS18 74 aa14.12□□□□□ -0.15
SNX4-201ENST00000251775 TMEM262E9PQX1 116 aa14.11□□□□□ -0.15
SNX4-201ENST00000251775 SLC25A20O43772 301 aa14.11□□□□□ -0.15
SNX4-201ENST00000251775 EIF4EBP3O60516 100 aaPredicted RBP14.11□□□□□ -0.15
SNX4-201ENST00000251775 NXPH4O95158 308 aa14.11□□□□□ -0.15
SNX4-201ENST00000251775 ZFAND6Q6FIF0 208 aa14.11□□□□□ -0.15
SNX4-201ENST00000251775 TMEM141Q96I45 108 aa14.11□□□□□ -0.15
SNX4-201ENST00000251775 CITED1Q99966 193 aa14.11□□□□□ -0.15
SNX4-201ENST00000251775 MAP1AP78559 2803 aaPredicted RBP14.11□□□□□ -0.15
SNX4-201ENST00000251775 J3QQQ9 107 aa14.1□□□□□ -0.15
SNX4-201ENST00000251775 ZNF876PQ49A33 203 aa14.1□□□□□ -0.15
SNX4-201ENST00000251775 APRG1Q8IVJ8 170 aa14.1□□□□□ -0.15
SNX4-201ENST00000251775 TIMM17AQ99595 171 aa14.1□□□□□ -0.15
SNX4-201ENST00000251775 RAX2Q96IS3 184 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms