RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 PIP4P1Q86T03 277 aa10.88□□□□□ -0.67
SFXN3-201ENST00000224807 TOMM6Q96B49 74 aa10.88□□□□□ -0.67
SFXN3-201ENST00000224807 PSMG3-AS1Q96PY0 264 aa10.88□□□□□ -0.67
SFXN3-201ENST00000224807 SLC50A1Q9BRV3 221 aa10.88□□□□□ -0.67
SFXN3-201ENST00000224807 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
SFXN3-201ENST00000224807 HIVEP3Q5T1R4 2406 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 TEX49A0A1B0GTD5 131 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 CLPSL1A2RUU4 121 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 ELANEP08246 267 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 CD7P09564 240 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 TTC32Q5I0X7 151 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 BRD3OSQ6XYD6 125 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 A0A0J9YY99 117 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 EDN2P20800 178 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 Q8N9W7 124 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 RNF5Q99942 180 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 SPXQ9BT56 116 aa10.87□□□□□ -0.67
SFXN3-201ENST00000224807 VPS13CQ709C8 3753 aa10.86□□□□□ -0.67
SFXN3-201ENST00000224807 LINC01546A6NGU7 62 aa10.86□□□□□ -0.67
SFXN3-201ENST00000224807 GAGE2BQ13066 116 aa10.86□□□□□ -0.67
SFXN3-201ENST00000224807 CDSNQ15517 529 aa10.86□□□□□ -0.67
SFXN3-201ENST00000224807 GAGE2EQ4V326 116 aa10.86□□□□□ -0.67
SFXN3-201ENST00000224807 GAGE2DQ9UEU5 116 aa10.86□□□□□ -0.67
SFXN3-201ENST00000224807 SMIM20Q8N5G0 67 aa10.86□□□□□ -0.67
SFXN3-201ENST00000224807 PRO1854Q9UHT4 67 aa10.86□□□□□ -0.67
SFXN3-201ENST00000224807 NPBQ8NG41 125 aa10.86□□□□□ -0.67
SFXN3-201ENST00000224807 A8MZ25 164 aa10.85□□□□□ -0.67
SFXN3-201ENST00000224807 CCDC179H3BU77 68 aa10.85□□□□□ -0.67
SFXN3-201ENST00000224807 CRYGDP07320 174 aa10.85□□□□□ -0.67
SFXN3-201ENST00000224807 SAA4P35542 130 aa10.85□□□□□ -0.67
SFXN3-201ENST00000224807 CEMP1Q6PRD7 247 aaPredicted RBP10.85□□□□□ -0.67
SFXN3-201ENST00000224807 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
SFXN3-201ENST00000224807 SDHAF1A6NFY7 115 aa10.84□□□□□ -0.67
SFXN3-201ENST00000224807 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
SFXN3-201ENST00000224807 DAND5Q8N907 189 aa10.84□□□□□ -0.67
SFXN3-201ENST00000224807 ZNRF2Q8NHG8 242 aa10.84□□□□□ -0.67
SFXN3-201ENST00000224807 J3QQQ9 107 aa10.84□□□□□ -0.67
SFXN3-201ENST00000224807 C10orf126Q8N4M7 172 aa10.84□□□□□ -0.67
SFXN3-201ENST00000224807 ERG28Q9UKR5 140 aa10.84□□□□□ -0.67
SFXN3-201ENST00000224807 TRAV21A0A0B4J279 112 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 TSHBP01222 138 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 PF4V1P10720 104 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 MUSTN1Q8IVN3 82 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 EEF1AKMT3Q96AZ1 226 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 KLK9Q9UKQ9 250 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 MUC4Q99102 2169 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 UBE2D1P51668 147 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 CACNA1AO00555 2505 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 JMJD1CQ15652 2540 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 LYRM7Q5U5X0 104 aa10.83□□□□□ -0.68
SFXN3-201ENST00000224807 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
SFXN3-201ENST00000224807 A0A0J9YXV3 536 aa10.82□□□□□ -0.68
SFXN3-201ENST00000224807 FAM159AQ6UWV7 190 aa10.82□□□□□ -0.68
SFXN3-201ENST00000224807 Q8NA96 180 aa10.82□□□□□ -0.68
SFXN3-201ENST00000224807 PRM2P04554 102 aa10.82□□□□□ -0.68
SFXN3-201ENST00000224807 TRAV8-3A0A0A6YYJ7 113 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
SFXN3-201ENST00000224807 PMVKQ15126 192 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 ZNF625Q96I27 306 aaPredicted RBP10.81□□□□□ -0.68
SFXN3-201ENST00000224807 FAM208BQ5VWN6 2430 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 SUMO4Q6EEV6 95 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 ZFAND2AQ8N6M9 145 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 KNCNA6PVL3 124 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 IGHV3-30P01768 117 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 IGHV3-30-5P0DP03 117 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 DUX3Q96PT4 197 aa10.81□□□□□ -0.68
SFXN3-201ENST00000224807 GAGE5Q13069 117 aa10.8□□□□□ -0.68
SFXN3-201ENST00000224807 GAGE6Q13070 117 aa10.8□□□□□ -0.68
SFXN3-201ENST00000224807 CLEC2BQ92478 149 aa10.8□□□□□ -0.68
SFXN3-201ENST00000224807 UBE2D3P61077 147 aa10.8□□□□□ -0.68
SFXN3-201ENST00000224807 UBE2D2P62837 147 aa10.8□□□□□ -0.68
SFXN3-201ENST00000224807 C15orf53Q8NAA6 179 aa10.8□□□□□ -0.68
SFXN3-201ENST00000224807 COX6B1P14854 86 aa10.79□□□□□ -0.68
SFXN3-201ENST00000224807 Q8N1Y9 231 aa10.79□□□□□ -0.68
SFXN3-201ENST00000224807 FAM110DQ8TAY7 271 aaPredicted RBP10.79□□□□□ -0.68
SFXN3-201ENST00000224807 P0DMU3 169 aa10.79□□□□□ -0.68
SFXN3-201ENST00000224807 FAM231AP0DMU4 169 aa10.79□□□□□ -0.68
SFXN3-201ENST00000224807 FAM231CP0DMU5 169 aa10.79□□□□□ -0.68
SFXN3-201ENST00000224807 RNASE3P12724 160 aaKnown RBP10.79□□□□□ -0.68
SFXN3-201ENST00000224807 DUX5Q96PT3 197 aa10.78□□□□□ -0.68
SFXN3-201ENST00000224807 PRRC2AP48634 2157 aaKnown RBP10.78□□□□□ -0.68
SFXN3-201ENST00000224807 C9orf47Q6ZRZ4 202 aa10.78□□□□□ -0.68
SFXN3-201ENST00000224807 TRAV8-4A0A0B4J246 113 aa10.78□□□□□ -0.68
SFXN3-201ENST00000224807 MDFICQ9P1T7 246 aa10.78□□□□□ -0.68
SFXN3-201ENST00000224807 RS1O15537 224 aa10.77□□□□□ -0.68
SFXN3-201ENST00000224807 HERV-K104P63124 156 aa10.77□□□□□ -0.68
SFXN3-201ENST00000224807 IGF2-ASQ6U949 168 aa10.77□□□□□ -0.68
SFXN3-201ENST00000224807 C2orf82Q6UX34 121 aa10.77□□□□□ -0.68
SFXN3-201ENST00000224807 LY6G5BQ8NDX9 201 aa10.77□□□□□ -0.68
SFXN3-201ENST00000224807 ACACBO00763 2458 aa10.77□□□□□ -0.69
SFXN3-201ENST00000224807 GPHB5Q86YW7 130 aa10.77□□□□□ -0.69
SFXN3-201ENST00000224807 CELSR2Q9HCU4 2923 aa10.76□□□□□ -0.69
SFXN3-201ENST00000224807 ODF3BA8MYP8 253 aa10.76□□□□□ -0.69
SFXN3-201ENST00000224807 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
SFXN3-201ENST00000224807 ZNF876PQ49A33 203 aa10.76□□□□□ -0.69
SFXN3-201ENST00000224807 ZANQ9Y493 2812 aa10.76□□□□□ -0.69
SFXN3-201ENST00000224807 TMEM95Q3KNT9 176 aa10.76□□□□□ -0.69
SFXN3-201ENST00000224807 SLC25A29Q8N8R3 303 aa10.76□□□□□ -0.69
SFXN3-201ENST00000224807 RHPN1-AS1Q9BWJ2 59 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms