RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 Q8N6K4 173 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 IGKV3-7A0A075B6H7 116 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 PMVKQ15126 192 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 LINC00477Q96M19 166 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 HRNRQ86YZ3 2850 aaPredicted RBP7.34□□□□□ -1.23
TUBB1-201ENST00000217133 SLC25A20O43772 301 aa7.34□□□□□ -1.23
TUBB1-201ENST00000217133 CFC1BP0CG36 223 aa7.34□□□□□ -1.23
TUBB1-201ENST00000217133 CFC1P0CG37 223 aa7.34□□□□□ -1.23
TUBB1-201ENST00000217133 MINOS1Q5TGZ0 78 aa7.34□□□□□ -1.23
TUBB1-201ENST00000217133 MINOS1-NBL1R4GNA1 71 aa7.34□□□□□ -1.23
TUBB1-201ENST00000217133 Q6ZS46 218 aa7.34□□□□□ -1.23
TUBB1-201ENST00000217133 SS18L2Q9UHA2 77 aa7.34□□□□□ -1.23
TUBB1-201ENST00000217133 DOPEY1Q5JWR5 2465 aa7.34□□□□□ -1.24
TUBB1-201ENST00000217133 GNRH2O43555 120 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 SNCGO76070 127 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 GATA3P23771 443 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 DEFB1P60022 68 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 LENEPQ9Y5L5 61 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 RPL39P62891 51 aaKnown RBP7.33□□□□□ -1.24
TUBB1-201ENST00000217133 GAGE2BQ13066 116 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 EBI3Q14213 229 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 GAGE2EQ4V326 116 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 ZNF843Q8N446 348 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 GAGE2DQ9UEU5 116 aa7.33□□□□□ -1.24
TUBB1-201ENST00000217133 TRBV7-1A0A0A6YYK4 115 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 TRAV2A0A0B4J234 112 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 IGHV1-69DA0A0B4J2H0 117 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 J3QQQ9 107 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 IGHV3-30P01768 117 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 CRYGDP07320 174 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 IGHV3-30-5P0DP03 117 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 GAGE5Q13069 117 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 GAGE6Q13070 117 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 ZFAND2AQ8N6M9 145 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 SLC25A29Q8N8R3 303 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 USP9YO00507 2555 aaPredicted RBP7.32□□□□□ -1.24
TUBB1-201ENST00000217133 ABCA12Q86UK0 2595 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 OVOL1O14753 267 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 BEX4Q9NWD9 120 aaPredicted RBP7.32□□□□□ -1.24
TUBB1-201ENST00000217133 TENM4Q6N022 2769 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 IGLV4-69A0A075B6H9 119 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 A4D1N5 150 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 B5MCH6 92 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 LINC00527Q9UJ94 153 aa7.32□□□□□ -1.24
TUBB1-201ENST00000217133 KMT2BQ9UMN6 2715 aaPredicted RBP7.31□□□□□ -1.24
TUBB1-201ENST00000217133 VCYO14598 125 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 TTC32Q5I0X7 151 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 TRPT1Q86TN4 253 aaKnown RBP7.31□□□□□ -1.24
TUBB1-201ENST00000217133 IGHV3-64A0A075B6Q5 118 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 F6UB75 175 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 TSPEAR-AS2P59090 65 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 TMEM141Q96I45 108 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 ZNF256Q9Y2P7 627 aaPredicted RBP7.31□□□□□ -1.24
TUBB1-201ENST00000217133 PTPN13Q12923 2485 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 VPS13CQ709C8 3753 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 A0A087WWL8 130 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 C19orf84I3L1E1 186 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 IGHV4-39P01824 125 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 FAM74A4Q5TZK3 123 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 GPHB5Q86YW7 130 aa7.31□□□□□ -1.24
TUBB1-201ENST00000217133 CENPVL3A0A0U1RRI6 287 aa7.3□□□□□ -1.24
TUBB1-201ENST00000217133 TSHBP01222 138 aa7.3□□□□□ -1.24
TUBB1-201ENST00000217133 NTN5Q8WTR8 489 aaPredicted RBP7.3□□□□□ -1.24
TUBB1-201ENST00000217133 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
TUBB1-201ENST00000217133 RNF223E7ERA6 249 aa7.3□□□□□ -1.24
TUBB1-201ENST00000217133 FAM159AQ6UWV7 190 aa7.3□□□□□ -1.24
TUBB1-201ENST00000217133 C1orf122Q6ZSJ8 110 aa7.3□□□□□ -1.24
TUBB1-201ENST00000217133 SBSPONQ8IVN8 264 aa7.3□□□□□ -1.24
TUBB1-201ENST00000217133 NOTCH2Q04721 2471 aa7.3□□□□□ -1.24
TUBB1-201ENST00000217133 IGIPA6NJ69 53 aa7.29□□□□□ -1.24
TUBB1-201ENST00000217133 CRIP2P52943 208 aaPredicted RBP7.29□□□□□ -1.24
TUBB1-201ENST00000217133 JPT2Q9H910 190 aa7.29□□□□□ -1.24
TUBB1-201ENST00000217133 U3KQE9 123 aa7.29□□□□□ -1.24
TUBB1-201ENST00000217133 DOPEY2Q9Y3R5 2298 aa7.29□□□□□ -1.24
TUBB1-201ENST00000217133 RNASE3P12724 160 aaKnown RBP7.29□□□□□ -1.24
TUBB1-201ENST00000217133 ITLN2Q8WWU7 325 aaPredicted RBP7.29□□□□□ -1.24
TUBB1-201ENST00000217133 MED14OSP0DP75 135 aa7.29□□□□□ -1.24
TUBB1-201ENST00000217133 SUMO4Q6EEV6 95 aa7.29□□□□□ -1.24
TUBB1-201ENST00000217133 ZNRF2Q8NHG8 242 aa7.29□□□□□ -1.24
TUBB1-201ENST00000217133 TIMM17AQ99595 171 aa7.29□□□□□ -1.24
TUBB1-201ENST00000217133 UBR5O95071 2799 aaPredicted RBP7.29□□□□□ -1.24
TUBB1-201ENST00000217133 IGHV3-33P01772 117 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 ZFP36P26651 326 aaKnown RBP7.28□□□□□ -1.24
TUBB1-201ENST00000217133 SAA4P35542 130 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 HECTD1Q9ULT8 2610 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 PRSS2P07478 247 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 ATXN8Q156A1 80 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 TMEM219Q86XT9 240 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 TRAV8-4A0A0B4J246 113 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 TRAV41A0A0B4J266 112 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 UNQ9165/PRO28630Q6UXU0 137 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
TUBB1-201ENST00000217133 GCN1Q92616 2671 aaKnown RBP7.28□□□□□ -1.24
TUBB1-201ENST00000217133 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.27□□□□□ -1.25
TUBB1-201ENST00000217133 POLR2KP53803 58 aaKnown RBP7.27□□□□□ -1.25
TUBB1-201ENST00000217133 ZNF56Q15929 161 aa7.27□□□□□ -1.25
TUBB1-201ENST00000217133 ZNF876PQ49A33 203 aa7.27□□□□□ -1.25
TUBB1-201ENST00000217133 Q8N1Y9 231 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms