RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm10775Q3V290 127 aa6.96□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm4894Q8CA09 118 aa6.96□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tmem147Q9CQG6 224 aa6.96□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tmem52Q9D702 196 aa6.96□□□□□ -1.29
Trim39-201ENSMUST00000042717 BlnkQ9QUN3 457 aa6.96□□□□□ -1.29
Trim39-201ENSMUST00000042717 Osr1Q9WVG7 266 aa6.96□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1458A0A1L1SSD5 307 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm17333C6EQI3 125 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm5239D3YYZ2 122 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 Zfp160E9Q459 650 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 P06323 132 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 Wnt10aP70701 417 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 CenptQ3TJM4 515 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 Spsb3Q571F5 354 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ifna12Q80SS5 189 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 9030612E09RikQ8CE20 140 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 Sft2d2Q8VD57 159 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 Chrdl1Q920C1 447 aa6.96□□□□□ -1.3
Trim39-201ENSMUST00000042717 Trav13n-4A0A0G2JG01 110 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr284A0A0U1RP76 321 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm6904E9PVF1 202 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm17669F6QL70 154 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 P01790 122 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Stfa1P35175 97 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Lrcol1Q3URS3 161 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1242Q8VGM6 306 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 4930583I09RikQ9D2E3 102 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr154Q9QY00 318 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Arid1bE9Q4N7 2244 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Scgb1b29D2XZ31 93 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Scgb1b20E9PWZ2 93 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr432E9Q8M2 312 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 GbaP17439 515 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Vdac1Q60932 296 aaKnown RBP6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1290Q7TQX8 312 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 PhyhiplQ8BGT8 375 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Slc16a13Q8CE94 428 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Nit1Q8VDK1 323 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr482Q8VG03 323 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Insig2Q91WG1 225 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Sfxn4Q925N1 313 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Nkg7Q99PA5 165 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm44596A0A0N4SVA0 210 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm12355A2A4X6 163 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm14412A2ARR7 526 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr749E9Q438 313 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Srsf3P84104 164 aaKnown RBP6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Cd200r4Q6XJV4 270 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1173Q7TR24 312 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Fam162bQ9CX19 157 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Kcnk5Q9JK62 502 aa6.95□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ighv1-58A0A075B5W9 117 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr231E9Q0M4 307 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Vmn1r113G3UWI8 307 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Scgb1b3J3QJY4 93 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gata2O09100 480 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 NdnP25233 325 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rab2aP53994 212 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rab5bP61021 215 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Cited1P97769 203 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 KcnrgQ2TUM3 264 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1209Q3SXJ3 310 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rhox10Q4TU83 196 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 AY761185Q5ERI8 94 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 MiaQ61865 130 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Adat3Q6PAT0 349 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rsl1Q7M6Y1 485 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 9230109A22RikQ8BHE6 111 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Angptl6Q8R0Z6 457 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr211Q8VGH2 309 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Errfi1Q99JZ7 461 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Tmem107Q9CPV0 140 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Srp19Q9D7A6 144 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 GlrxQ9QUH0 107 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 FlnaQ8BTM8 2647 aaKnown RBP6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Spam1P48794 512 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Prok1Q14A28 105 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Arg1Q61176 323 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rab11fip5Q8R361 645 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 TirapQ99JY1 241 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 RTRAFQ9CQE8 244 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Hspb9Q9DAM3 168 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Fgf16Q9ESL8 207 aa6.94□□□□□ -1.3
Trim39-201ENSMUST00000042717 Igkv1-132A0A0B4J1H9 120 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm5890A0A140LI04 305 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1291-ps1A0A286YE47 326 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Frrs1lB1AXV0 293 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Mcrip1Q3UGS4 97 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Coq2Q66JT7 374 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gm10306Q9CUK2 115 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ovol1Q9WTJ2 267 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Cyb561d1A2AE42 229 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Cd74P04441 279 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 HexbP20060 536 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Gstp2P46425 210 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Ell3Q80VR2 395 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Eif5a2Q8BGY2 153 aaKnown RBP6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Olfr1394Q8VET2 312 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Tmem205Q91XE8 189 aa6.93□□□□□ -1.3
Trim39-201ENSMUST00000042717 Rab31Q921E2 194 aa6.93□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms