RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Immp2lQ8BPT6 175 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 PgpQ8CHP8 321 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 2200002J24RikQ9D807 110 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Nup214Q80U93 2085 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 AsipQ03288 131 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Scrt1Q99M85 348 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Zfhx2Q2MHN3 2562 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Ighv1-67A0A0G2JFN9 117 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Tmem92B7ZWI3 162 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Gm20825J3QM67 227 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Efna4O08542 206 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Wipf3P0C7L0 485 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Ssty2Q149W4 227 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Gm21394Q497R7 227 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Tmem40Q4FJU9 225 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Gm20854Q62461 227 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Olfr553Q7TRS6 326 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Leprotl1Q9CQ74 131 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Zfpl1Q9DB43 310 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Gm45844A0A1B0GRQ2 137 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Prss44Q402U7 372 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Atp23Q9CWQ3 201 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Dynlrb2Q9DAJ5 96 aa8.6□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Wdr86D3Z757 380 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Ucp1P12242 307 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Gstp1P19157 210 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Pax8Q00288 457 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Foxg1Q60987 481 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 EpopQ7TNS8 369 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 C330021F23RikQ8C7T0 141 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Klk13Q8CGR6 276 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Prss22Q9ER10 306 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Ighv5-16A0A0B4J1P4 117 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Olfr364-ps1A0A140T8Q2 307 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Lnp1A0A1B0GSK3 178 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 eef1akmt3D3YWP0 232 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Gm10130F6ZHM5 101 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 LalbaP29752 143 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 AgerQ62151 402 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Morn2Q6UL01 79 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Igkv14-100A0A0G2JG36 117 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Igkv14-111A0A140T8P9 117 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Tstd1E9PY03 133 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Cd300eQ8K249 196 aa8.59□□□□□ -1.03
Ccdc40-201ENSMUST00000035935 Trav7n-5A0A075B604 112 aa8.59□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 D930048N14RikA2AA67 225 aa8.59□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 P04212 136 aa8.59□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 CampP51437 172 aa8.59□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Spink11Q09TK7 88 aa8.59□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Q9CX63 252 aa8.59□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 A730046J19RikA0A1B0GSN8 89 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Adamts17E9Q4D1 1122 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Aqp7O54794 303 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Neurog3P70661 214 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Folr2Q05685 251 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 C1ql4Q4ZJM9 238 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Dtx1Q61010 627 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 LgalslbQ7TPX9 165 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Slc25a20Q9Z2Z6 301 aaKnown RBP8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Foxl2O88470 375 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 P06334 169 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 BsgP18572 389 aaKnown RBP8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr143P34985 313 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Q5BN45 167 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tbr1Q64336 681 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Znhit1Q8R331 154 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Srd5a2Q99N99 254 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Hils1Q9QYL0 170 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Sfrp4Q9Z1N6 351 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trbv1A0A0B4J1G7 116 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trav15-1-dv6-1Q5R1D2 117 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Fam240aJ3QNP9 97 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 S100a8P27005 89 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Mrps21P58059 87 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Dppa1Q810Y7 116 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Q8VC23 124 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 H2al3Q9D4U4 128 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Mettl26Q9DCS2 204 aa8.58□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Trav4-4-dv10A0A075B651 110 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Cpsf4lE9Q2N0 280 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm15292L7N231 93 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Eda2rQ8BX35 297 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Pbp2Q8VIN1 187 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Map1lc3aQ91VR7 121 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ssbp3Q9D032 388 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Hdgfl3Q9JMG7 202 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gm21974F6W3F3 119 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Rnf5O35445 180 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 P01660 111 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 P04946 108 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 ApohQ01339 345 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr263Q7TQT8 317 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Olfr1178Q7TR20 323 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tmem140Q8BGY5 185 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Gpr87Q99MT7 358 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Tmem170aQ9D342 144 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 BlnkQ9QUN3 457 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Cbln1Q9R171 193 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Slc25a15Q9WVD5 301 aa8.57□□□□□ -1.04
Ccdc40-201ENSMUST00000035935 Ripply2Q2WG76 128 aa8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms