RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 URGCP-MRPS24S4R325 110 aa12.59□□□□□ -0.39
PHGDH-230ENST00000641927 IGLC6P0CF74 106 aa12.58□□□□□ -0.4
PHGDH-230ENST00000641927 DNLZQ5SXM8 178 aa12.58□□□□□ -0.4
PHGDH-230ENST00000641927 LYZL1Q6UWQ5 148 aa12.58□□□□□ -0.4
PHGDH-230ENST00000641927 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
PHGDH-230ENST00000641927 SPINK4O60575 86 aa12.57□□□□□ -0.4
PHGDH-230ENST00000641927 S100PP25815 95 aa12.57□□□□□ -0.4
PHGDH-230ENST00000641927 KCNIP4Q6PIL6 250 aa12.57□□□□□ -0.4
PHGDH-230ENST00000641927 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-230ENST00000641927 NUP35Q8NFH5 326 aa12.57□□□□□ -0.4
PHGDH-230ENST00000641927 CXorf65A6NEN9 183 aa12.57□□□□□ -0.4
PHGDH-230ENST00000641927 Q8NAQ8 132 aa12.57□□□□□ -0.4
PHGDH-230ENST00000641927 BORCS7Q96B45 105 aa12.57□□□□□ -0.4
PHGDH-230ENST00000641927 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
PHGDH-230ENST00000641927 NOP10Q9NPE3 64 aaKnown RBP12.57□□□□□ -0.4
PHGDH-230ENST00000641927 F2Z2F3 143 aa12.56□□□□□ -0.4
PHGDH-230ENST00000641927 M0R381 172 aa12.56□□□□□ -0.4
PHGDH-230ENST00000641927 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
PHGDH-230ENST00000641927 MED14OSP0DP75 135 aa12.56□□□□□ -0.4
PHGDH-230ENST00000641927 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
PHGDH-230ENST00000641927 OR10AG1Q8NH19 301 aa12.56□□□□□ -0.4
PHGDH-230ENST00000641927 IMMP2LQ96T52 175 aa12.56□□□□□ -0.4
PHGDH-230ENST00000641927 PLAC8L1A1L4L8 177 aa12.55□□□□□ -0.4
PHGDH-230ENST00000641927 SNAI2O43623 268 aa12.55□□□□□ -0.4
PHGDH-230ENST00000641927 CTRLP40313 264 aa12.55□□□□□ -0.4
PHGDH-230ENST00000641927 FOXA3P55318 350 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-230ENST00000641927 SPXQ9BT56 116 aa12.55□□□□□ -0.4
PHGDH-230ENST00000641927 SSBP4Q9BWG4 385 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-230ENST00000641927 SCRT2Q9NQ03 307 aa12.55□□□□□ -0.4
PHGDH-230ENST00000641927 TMA7Q9Y2S6 64 aaKnown RBP12.55□□□□□ -0.4
PHGDH-230ENST00000641927 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
PHGDH-230ENST00000641927 M0R2P5 195 aa12.54□□□□□ -0.4
PHGDH-230ENST00000641927 ZNF876PQ49A33 203 aa12.54□□□□□ -0.4
PHGDH-230ENST00000641927 ZFP82Q8N141 532 aa12.54□□□□□ -0.4
PHGDH-230ENST00000641927 SYT8Q8NBV8 401 aa12.54□□□□□ -0.4
PHGDH-230ENST00000641927 MRPL16Q9NX20 251 aaKnown RBP12.54□□□□□ -0.4
PHGDH-230ENST00000641927 A0A1B0GUT8 65 aa12.53□□□□□ -0.4
PHGDH-230ENST00000641927 DAZ2Q13117 558 aaKnown RBP12.53□□□□□ -0.4
PHGDH-230ENST00000641927 TWIST1Q15672 202 aa12.53□□□□□ -0.4
PHGDH-230ENST00000641927 MRPL54Q6P161 138 aaKnown RBP12.53□□□□□ -0.4
PHGDH-230ENST00000641927 IL17DQ8TAD2 202 aa12.53□□□□□ -0.4
PHGDH-230ENST00000641927 NTF3P20783 257 aa12.52□□□□□ -0.4
PHGDH-230ENST00000641927 CACNG7P62955 275 aa12.52□□□□□ -0.4
PHGDH-230ENST00000641927 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.4
PHGDH-230ENST00000641927 BTF3L4Q96K17 158 aa12.52□□□□□ -0.4
PHGDH-230ENST00000641927 RIGQ13278 110 aa12.51□□□□□ -0.41
PHGDH-230ENST00000641927 A0A0J9YWU9 116 aa12.51□□□□□ -0.41
PHGDH-230ENST00000641927 COLCA2A8K830 154 aa12.51□□□□□ -0.41
PHGDH-230ENST00000641927 NHLRC4P0CG21 123 aaPredicted RBP12.51□□□□□ -0.41
PHGDH-230ENST00000641927 FAM222AQ5U5X8 452 aa12.51□□□□□ -0.41
PHGDH-230ENST00000641927 Q6ZTI0 123 aa12.51□□□□□ -0.41
PHGDH-230ENST00000641927 MSRB1Q9NZV6 116 aa12.51□□□□□ -0.41
PHGDH-230ENST00000641927 MUC4Q99102 2169 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 GAGE12BA1L429 117 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 GAGE7O76087 117 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 GAGE12FP0CL80 117 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 GAGE12GP0CL81 117 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 GAGE12IP0CL82 117 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 CAMPP49913 170 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 ELOBQ15370 118 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 YPEL4Q96NS1 127 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 CNFNQ9BYD5 112 aa12.5□□□□□ -0.41
PHGDH-230ENST00000641927 LGALS9BQ3B8N2 356 aa12.49□□□□□ -0.41
PHGDH-230ENST00000641927 WDR73Q6P4I2 378 aa12.49□□□□□ -0.41
PHGDH-230ENST00000641927 C11orf68Q9H3H3 251 aaKnown RBP12.49□□□□□ -0.41
PHGDH-230ENST00000641927 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
PHGDH-230ENST00000641927 PRKDCP78527 4128 aaKnown RBP12.49□□□□□ -0.41
PHGDH-230ENST00000641927 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 TRAV9-1A0A075B6T8 112 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 TGIF2-C20orf24A0A0A6YYL0 155 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 LYRM9A8MSI8 78 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 SPART-AS1P0CW21 52 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 RASL10AQ92737 203 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 CELA1Q9UNI1 258 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 IGHV4-4A0A075B6R2 117 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 NXPH4O95158 308 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 ATP5L2Q7Z4Y8 100 aa12.48□□□□□ -0.41
PHGDH-230ENST00000641927 HUWE1Q7Z6Z7 4374 aaKnown RBP12.47□□□□□ -0.41
PHGDH-230ENST00000641927 HBBP68871 147 aa12.47□□□□□ -0.41
PHGDH-230ENST00000641927 SMIM15Q7Z3B0 74 aa12.47□□□□□ -0.41
PHGDH-230ENST00000641927 PTH2Q96A98 100 aa12.47□□□□□ -0.41
PHGDH-230ENST00000641927 AP1S3Q96PC3 154 aa12.47□□□□□ -0.41
PHGDH-230ENST00000641927 JPT2Q9H910 190 aa12.47□□□□□ -0.41
PHGDH-230ENST00000641927 TENM3Q9P273 2699 aa12.47□□□□□ -0.41
PHGDH-230ENST00000641927 DNAH9Q9NYC9 4486 aa12.47□□□□□ -0.41
PHGDH-230ENST00000641927 TRGC1P0CF51 173 aa12.46□□□□□ -0.41
PHGDH-230ENST00000641927 RAB4BP61018 213 aa12.46□□□□□ -0.41
PHGDH-230ENST00000641927 C14orf178Q8N769 122 aaPredicted RBP12.46□□□□□ -0.41
PHGDH-230ENST00000641927 A0A087WWL8 130 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 A0A1B0GW15 77 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 SMIM17P0DL12 118 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 EVI2AP22794 236 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 DAD1P61803 113 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 TRBV24-1A0A075B6N3 115 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 TEX48A0A1B0GUV7 120 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 A0A1B0GXF2 115 aa12.45□□□□□ -0.42
PHGDH-230ENST00000641927 A8MWV9 139 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms