RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 C20orf173Q96LM9 149 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 DPH3P1Q9H4G8 78 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 TMEM238LA0A1B0GVL6 79 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 LINC01549A6NIU2 74 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 A6NJY4 79 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 G3V318 75 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 SPRY2O43597 315 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 ZFP36P26651 326 aaKnown RBP10.39□□□□□ -0.75
PAX6-280ENST00000640872 FBXL19-AS1Q494R0 122 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 AJUBAQ96IF1 538 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 SIRPDQ9H106 197 aa10.39□□□□□ -0.75
PAX6-280ENST00000640872 TRBV7-1A0A0A6YYK4 115 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 C16orf92Q96LL3 132 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 CELSR2Q9HCU4 2923 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 LINC01548A6NM66 108 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 TSPAN13O95857 204 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 KLRB1Q12918 225 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 SCGB2A2Q13296 93 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 LY6DQ14210 128 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 C11orf71Q6IPW1 123 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 C9orf139Q6ZV77 190 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
PAX6-280ENST00000640872 CRYBG3Q68DQ2 2970 aa10.38□□□□□ -0.75
PAX6-280ENST00000640872 UBE2D3P61077 147 aa10.37□□□□□ -0.75
PAX6-280ENST00000640872 UBE2D2P62837 147 aa10.37□□□□□ -0.75
PAX6-280ENST00000640872 NFE4Q86UQ8 179 aa10.37□□□□□ -0.75
PAX6-280ENST00000640872 GLMPQ8WWB7 406 aa10.37□□□□□ -0.75
PAX6-280ENST00000640872 CDIP1Q9H305 208 aa10.37□□□□□ -0.75
PAX6-280ENST00000640872 CD7P09564 240 aa10.37□□□□□ -0.75
PAX6-280ENST00000640872 SCGB1D4Q6XE38 83 aa10.37□□□□□ -0.75
PAX6-280ENST00000640872 TRAV21A0A0B4J279 112 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 J3KRW8 73 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 CRYGDP07320 174 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 CKS1BP61024 79 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 SYT8Q8NBV8 401 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 SVIPQ8NHG7 77 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 IGSF10Q6WRI0 2623 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 CACNA1AO00555 2505 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 MED14OSP0DP75 135 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 ASIPP42127 132 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
PAX6-280ENST00000640872 CSMD2Q7Z408 3487 aa10.35□□□□□ -0.75
PAX6-280ENST00000640872 MGPP08493 103 aa10.35□□□□□ -0.75
PAX6-280ENST00000640872 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
PAX6-280ENST00000640872 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
PAX6-280ENST00000640872 ZFP2Q6ZN57 461 aa10.35□□□□□ -0.75
PAX6-280ENST00000640872 GPHB5Q86YW7 130 aa10.35□□□□□ -0.75
PAX6-280ENST00000640872 PHLDA3Q9Y5J5 127 aa10.35□□□□□ -0.75
PAX6-280ENST00000640872 IGLV4-69A0A075B6H9 119 aa10.34□□□□□ -0.75
PAX6-280ENST00000640872 TSHBP01222 138 aa10.34□□□□□ -0.75
PAX6-280ENST00000640872 PSMB2P49721 201 aa10.34□□□□□ -0.75
PAX6-280ENST00000640872 FHL3Q13643 280 aa10.34□□□□□ -0.75
PAX6-280ENST00000640872 ANXA2RQ3ZCQ2 193 aa10.34□□□□□ -0.75
PAX6-280ENST00000640872 POM121L12Q8N7R1 296 aa10.34□□□□□ -0.75
PAX6-280ENST00000640872 KLHL30-AS1Q8NEE0 82 aa10.34□□□□□ -0.75
PAX6-280ENST00000640872 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
PAX6-280ENST00000640872 DUSP14O95147 198 aaKnown RBP10.34□□□□□ -0.75
PAX6-280ENST00000640872 UBE2E1P51965 193 aa10.34□□□□□ -0.75
PAX6-280ENST00000640872 LOC107984156A0A0G2JMH3 177 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 A0A0J9YY99 117 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 SOCS3O14543 225 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 ARL17AQ8IVW1 177 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 FAM19A4Q96LR4 140 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 PPP1R17O96001 155 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 SFTA2Q6UW10 78 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 NDUFA11Q86Y39 141 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 OR10J6PQ8NGY7 276 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 ZFYVE26Q68DK2 2539 aa10.33□□□□□ -0.76
PAX6-280ENST00000640872 IGHV1-69DA0A0B4J2H0 117 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 A0A1W2PPR1 153 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 OVOL1O14753 267 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 RNASE3P12724 160 aaKnown RBP10.32□□□□□ -0.76
PAX6-280ENST00000640872 SAA4P35542 130 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 CARD19Q96LW7 228 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 IGIPA6NJ69 53 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 NXPH4O95158 308 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 DEFB1P60022 68 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 RPL32P62910 135 aaKnown RBP10.32□□□□□ -0.76
PAX6-280ENST00000640872 LYRM7Q5U5X0 104 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 APRG1Q8IVJ8 170 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 PTH2Q96A98 100 aa10.32□□□□□ -0.76
PAX6-280ENST00000640872 ACACBO00763 2458 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 CRYBA4P53673 196 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 LINC00315P59091 139 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 CACNA1BQ00975 2339 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 PAPPA-AS1Q5QFB9 102 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 SBSPONQ8IVN8 264 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 C5orf56Q8N8D9 126 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 ZNF418Q8TF45 676 aaPredicted RBP10.31□□□□□ -0.76
PAX6-280ENST00000640872 CLUHP3Q96NS8 147 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 KIF25-AS1Q9Y6Z4 181 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 CENPEQ02224 2701 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 GNRH2O43555 120 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 TCL1BO95988 128 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 HERVK_113P61574 105 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 TEN1Q86WV5 123 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 PPDPFLQ8WWR9 84 aa10.31□□□□□ -0.76
PAX6-280ENST00000640872 TP53TG1Q9Y2A0 90 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms