RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 SPATA12Q7Z6I5 190 aa8.39□□□□□ -1.07
GFAP-238ENST00000640859 OR11H1Q8NG94 326 aa8.39□□□□□ -1.07
GFAP-238ENST00000640859 C14orf144Q96I85 54 aa8.39□□□□□ -1.07
GFAP-238ENST00000640859 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
GFAP-238ENST00000640859 LAMTOR2Q9Y2Q5 125 aa8.39□□□□□ -1.07
GFAP-238ENST00000640859 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 LINC01546A6NGU7 62 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 CRXO43186 299 aaPredicted RBP8.38□□□□□ -1.07
GFAP-238ENST00000640859 WIPF1O43516 503 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 GNRH2O43555 120 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 DUSP14O95147 198 aaKnown RBP8.38□□□□□ -1.07
GFAP-238ENST00000640859 GAS8-AS1O95177 125 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 NCR2O95944 276 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 ASIPP42127 132 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 DEFA6Q01524 100 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 SPANXN1Q5VSR9 72 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 OR9G4Q8NGQ1 327 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 SPATA3Q8NHX4 192 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 LINC01006Q8NI28 216 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 NDUFAF3Q9BU61 184 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 TMEM70Q9BUB7 260 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 VAMP8Q9BV40 100 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 PEMTQ9UBM1 199 aa8.38□□□□□ -1.07
GFAP-238ENST00000640859 A0A096LNJ9 63 aa8.37□□□□□ -1.07
GFAP-238ENST00000640859 C7orf71A4D174 169 aa8.37□□□□□ -1.07
GFAP-238ENST00000640859 SYS1-DBNDD2H3BUS1 97 aa8.37□□□□□ -1.07
GFAP-238ENST00000640859 RNASE3P12724 160 aaKnown RBP8.37□□□□□ -1.07
GFAP-238ENST00000640859 EVI2AP22794 236 aa8.37□□□□□ -1.07
GFAP-238ENST00000640859 SMIM15Q7Z3B0 74 aa8.37□□□□□ -1.07
GFAP-238ENST00000640859 KLHL30-AS1Q8NEE0 82 aa8.37□□□□□ -1.07
GFAP-238ENST00000640859 DLX4Q92988 240 aaPredicted RBP8.37□□□□□ -1.07
GFAP-238ENST00000640859 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
GFAP-238ENST00000640859 ANK3Q12955 4377 aaKnown RBP8.36□□□□□ -1.07
GFAP-238ENST00000640859 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 A8MTW9 85 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 NXPH4O95158 308 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 TNFRSF6BO95407 300 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 GATA1P15976 413 aaPredicted RBP8.36□□□□□ -1.07
GFAP-238ENST00000640859 S100A4P26447 101 aaKnown RBP8.36□□□□□ -1.07
GFAP-238ENST00000640859 KHDC1LQ5JSQ8 128 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 SHISA2Q6UWI4 295 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 PET117Q6UWS5 81 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 FOXI2Q6ZQN5 318 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 DEFB125Q8N687 156 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 DUX3Q96PT4 197 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 ZNF747Q9BV97 191 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 PAM16Q9Y3D7 125 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 AGRNO00468 2067 aa8.36□□□□□ -1.07
GFAP-238ENST00000640859 SPRY2O43597 315 aa8.35□□□□□ -1.07
GFAP-238ENST00000640859 HIST2H2BDQ6DRA6 164 aa8.35□□□□□ -1.07
GFAP-238ENST00000640859 AMTNQ6UX39 209 aa8.35□□□□□ -1.07
GFAP-238ENST00000640859 NRACQ8N912 160 aa8.35□□□□□ -1.07
GFAP-238ENST00000640859 OR2K2Q8NGT1 345 aa8.35□□□□□ -1.07
GFAP-238ENST00000640859 RAX2Q96IS3 184 aa8.35□□□□□ -1.07
GFAP-238ENST00000640859 MIEN1Q9BRT3 115 aa8.35□□□□□ -1.07
GFAP-238ENST00000640859 TIMM8BQ9Y5J9 83 aaPredicted RBP8.35□□□□□ -1.07
GFAP-238ENST00000640859 SORL1Q92673 2214 aa8.35□□□□□ -1.07
GFAP-238ENST00000640859 MUC4Q99102 2169 aa8.35□□□□□ -1.07
GFAP-238ENST00000640859 IGLV2-18A0A075B6J9 118 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 TRAV9-2A0A087WT02 112 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 TRAV12-3A0A0B4J271 114 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 CD28P10747 220 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 TSPOP30536 169 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 FHL3Q13643 280 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 DEFB114Q30KQ6 69 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 SPATA45Q537H7 98 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 FAM159AQ6UWV7 190 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 Q8N8P6 123 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 MRAP2Q96G30 205 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 MAP1LC3CQ9BXW4 147 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
GFAP-238ENST00000640859 PHLDA3Q9Y5J5 127 aa8.34□□□□□ -1.07
GFAP-238ENST00000640859 C20orf202A1L168 122 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 M0R381 172 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 EREGO14944 169 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 IGKV3-20P01619 116 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 HBDP02042 147 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 DEFB131AP59861 70 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 TMEM61Q8N0U2 210 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 ATOH7Q8N100 152 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 POM121L12Q8N7R1 296 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 DPH3P1Q9H4G8 78 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 STAB1Q9NY15 2570 aa8.33□□□□□ -1.08
GFAP-238ENST00000640859 IGHV3-16A0A0C4DH30 117 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 OR4C46A6NHA9 309 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 KNCNA6PVL3 124 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 CCL24O00175 119 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 HLA-DRB4P13762 266 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 CDKN1BP46527 198 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 PROK1P58294 105 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 MAJINQ3KP22 176 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 LINC01545Q5VT33 79 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 DYNLRB2Q8TF09 96 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 C9orf85Q96MD7 179 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 KIF25-AS1Q9Y6Z4 181 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 HLA-DRB4X5D2U9 266 aa8.32□□□□□ -1.08
GFAP-238ENST00000640859 FBN1P35555 2871 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms