RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 DSCAML1Q8TD84 2053 aa12.94□□□□□ -0.34
SCARB2-210ENST00000638567 RBMY1BA6NDE4 496 aaKnown RBP12.93□□□□□ -0.34
SCARB2-210ENST00000638567 RBMY1EA6NEQ0 496 aaKnown RBP12.93□□□□□ -0.34
SCARB2-210ENST00000638567 RBMY1DP0C7P1 496 aaKnown RBP12.93□□□□□ -0.34
SCARB2-210ENST00000638567 RBMY1A1P0DJD3 496 aaKnown RBP12.93□□□□□ -0.34
SCARB2-210ENST00000638567 RBMY1CP0DJD4 496 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 PRIMA1Q86XR5 153 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 FANCD2OSQ96PS1 177 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 I3L3M4 83 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 LINC01356Q8N9X3 169 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 RPL39LQ96EH5 51 aaKnown RBP12.93□□□□□ -0.34
SCARB2-210ENST00000638567 TRAV8-3A0A0A6YYJ7 113 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 K7EMI3 77 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 LOXL1Q08397 574 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-210ENST00000638567 XCL2Q9UBD3 114 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 LENEPQ9Y5L5 61 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 SAP30O75446 220 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 RASL10AQ92737 203 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 TP73-AS1Q9UF72 201 aa12.93□□□□□ -0.34
SCARB2-210ENST00000638567 CFAP161Q6P656 301 aa12.92□□□□□ -0.34
SCARB2-210ENST00000638567 MRPL53Q96EL3 112 aaKnown RBP12.92□□□□□ -0.34
SCARB2-210ENST00000638567 TCTEX1D4Q5JR98 221 aa12.92□□□□□ -0.34
SCARB2-210ENST00000638567 TRBV20-1A0A075B6N2 111 aa12.92□□□□□ -0.34
SCARB2-210ENST00000638567 J3QQQ9 107 aa12.92□□□□□ -0.34
SCARB2-210ENST00000638567 ZNF493Q6ZR52 646 aa12.92□□□□□ -0.34
SCARB2-210ENST00000638567 ANKRD11Q6UB99 2663 aaPredicted RBP12.92□□□□□ -0.34
SCARB2-210ENST00000638567 RNF223E7ERA6 249 aa12.91□□□□□ -0.34
SCARB2-210ENST00000638567 FXYD2P54710 66 aa12.91□□□□□ -0.34
SCARB2-210ENST00000638567 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
SCARB2-210ENST00000638567 PRO3102Q9H379 93 aa12.9□□□□□ -0.34
SCARB2-210ENST00000638567 PRO1854Q9UHT4 67 aa12.9□□□□□ -0.34
SCARB2-210ENST00000638567 IGHV3-38A0A0C4DH36 116 aa12.9□□□□□ -0.34
SCARB2-210ENST00000638567 CTRLP40313 264 aa12.9□□□□□ -0.34
SCARB2-210ENST00000638567 C11orf68Q9H3H3 251 aaKnown RBP12.9□□□□□ -0.34
SCARB2-210ENST00000638567 LRP4O75096 1905 aa12.9□□□□□ -0.35
SCARB2-210ENST00000638567 NAV2Q8IVL1 2488 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 FGF6P10767 208 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 CEP192Q8TEP8 1941 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 TEX48A0A1B0GUV7 120 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 PAX4O43316 350 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 NBL1P41271 181 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 BOD1L2Q8IYS8 172 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 BLCAPP62952 87 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 TCF15Q12870 199 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 NSUN5P1Q3KNT7 163 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 RHODO00212 210 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 GATA3P23771 443 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 ZFP36P26651 326 aaKnown RBP12.89□□□□□ -0.35
SCARB2-210ENST00000638567 DEFB1P60022 68 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 PPDPFLQ8WWR9 84 aa12.89□□□□□ -0.35
SCARB2-210ENST00000638567 CRPP02741 224 aa12.88□□□□□ -0.35
SCARB2-210ENST00000638567 NDUFA12Q9UI09 145 aa12.88□□□□□ -0.35
SCARB2-210ENST00000638567 RNF114Q9Y508 228 aa12.88□□□□□ -0.35
SCARB2-210ENST00000638567 TRBV6-1A0A0K0K1D8 114 aa12.88□□□□□ -0.35
SCARB2-210ENST00000638567 MALP21145 153 aa12.88□□□□□ -0.35
SCARB2-210ENST00000638567 RNASE13Q5GAN3 156 aaKnown RBP12.88□□□□□ -0.35
SCARB2-210ENST00000638567 Q8NA96 180 aa12.88□□□□□ -0.35
SCARB2-210ENST00000638567 SH2D6Q7Z4S9 175 aa12.87□□□□□ -0.35
SCARB2-210ENST00000638567 ATG2AQ2TAZ0 1938 aa12.87□□□□□ -0.35
SCARB2-210ENST00000638567 ZNF80P51504 273 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-210ENST00000638567 TMEM86BQ8N661 226 aa12.87□□□□□ -0.35
SCARB2-210ENST00000638567 RANBP2P49792 3224 aaKnown RBP12.87□□□□□ -0.35
SCARB2-210ENST00000638567 IGHV4-61A0A0C4DH41 118 aa12.87□□□□□ -0.35
SCARB2-210ENST00000638567 GATD1Q8NB37 220 aa12.87□□□□□ -0.35
SCARB2-210ENST00000638567 IGLL5B9A064 214 aa12.86□□□□□ -0.35
SCARB2-210ENST00000638567 SPTBN4Q9H254 2564 aa12.86□□□□□ -0.35
SCARB2-210ENST00000638567 ODF1Q14990 250 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 GAGE12JA6NER3 117 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 AZU1P20160 251 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 GAGE4Q13068 117 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 GAGE5Q13069 117 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 ADORA2A-AS1P86434 159 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 C16orf54Q6UWD8 224 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 AJUBAQ96IF1 538 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 HTTP42858 3142 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 IGHV4-59P01825 116 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 IGHV4-38-2P0DP08 117 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 SPATA12Q7Z6I5 190 aa12.85□□□□□ -0.35
SCARB2-210ENST00000638567 CHD8Q9HCK8 2581 aa12.84□□□□□ -0.35
SCARB2-210ENST00000638567 ZNRF2Q8NHG8 242 aa12.84□□□□□ -0.35
SCARB2-210ENST00000638567 ARHGAP32A7KAX9 2087 aa12.84□□□□□ -0.35
SCARB2-210ENST00000638567 H3BUA1 57 aa12.84□□□□□ -0.35
SCARB2-210ENST00000638567 C6orf226Q5I0X4 101 aa12.84□□□□□ -0.35
SCARB2-210ENST00000638567 ABCA2Q9BZC7 2435 aa12.83□□□□□ -0.36
SCARB2-210ENST00000638567 C5orf56Q8N8D9 126 aa12.83□□□□□ -0.36
SCARB2-210ENST00000638567 C5orf42Q9H799 3197 aa12.83□□□□□ -0.36
SCARB2-210ENST00000638567 CHD7Q9P2D1 2997 aa12.83□□□□□ -0.36
SCARB2-210ENST00000638567 TLN2Q9Y4G6 2542 aa12.83□□□□□ -0.36
SCARB2-210ENST00000638567 LEPROTO15243 131 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 CFHR3Q02985 330 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 ATP6V0BQ99437 205 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 DEFB130BP0DP73 79 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 DEFB130AP0DP74 79 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 VWC2LB2RUY7 222 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 LINC01619G3V211 115 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 SLC25A20O43772 301 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 C9orf47Q6ZRZ4 202 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 MYCNOSP40205 109 aa12.82□□□□□ -0.36
SCARB2-210ENST00000638567 DEFB112Q30KQ8 113 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms