RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 ZNF493Q6ZR52 646 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 NUP35Q8NFH5 326 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 SCRT2Q9NQ03 307 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 SNAI2O43623 268 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 SPINK4O60575 86 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 MIFP14174 115 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 OR10AG1Q8NH19 301 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 GFRA4Q9GZZ7 299 aa10.6□□□□□ -0.71
LIMS4-203ENST00000632758 NOP10Q9NPE3 64 aaKnown RBP10.6□□□□□ -0.71
LIMS4-203ENST00000632758 A0A1W2PPQ1 181 aa10.59□□□□□ -0.71
LIMS4-203ENST00000632758 FAM231BA6NCW3 169 aa10.59□□□□□ -0.71
LIMS4-203ENST00000632758 TMEM88Q6PEY1 159 aa10.59□□□□□ -0.71
LIMS4-203ENST00000632758 IL17DQ8TAD2 202 aa10.59□□□□□ -0.71
LIMS4-203ENST00000632758 NAT8BQ9UHF3 227 aa10.59□□□□□ -0.71
LIMS4-203ENST00000632758 URGCP-MRPS24S4R325 110 aa10.59□□□□□ -0.71
LIMS4-203ENST00000632758 SNURFLB1AK76 121 aa10.58□□□□□ -0.72
LIMS4-203ENST00000632758 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
LIMS4-203ENST00000632758 MED14OSP0DP75 135 aa10.58□□□□□ -0.72
LIMS4-203ENST00000632758 DMRTA1Q5VZB9 504 aa10.58□□□□□ -0.72
LIMS4-203ENST00000632758 CBLN2Q8IUK8 224 aa10.58□□□□□ -0.72
LIMS4-203ENST00000632758 ZMAT4Q9H898 229 aa10.58□□□□□ -0.72
LIMS4-203ENST00000632758 CTRLP40313 264 aa10.57□□□□□ -0.72
LIMS4-203ENST00000632758 IMMP2LQ96T52 175 aa10.57□□□□□ -0.72
LIMS4-203ENST00000632758 MRPL16Q9NX20 251 aaKnown RBP10.57□□□□□ -0.72
LIMS4-203ENST00000632758 MSRB1Q9NZV6 116 aa10.57□□□□□ -0.72
LIMS4-203ENST00000632758 PHLDA3Q9Y5J5 127 aa10.57□□□□□ -0.72
LIMS4-203ENST00000632758 F2Z2F3 143 aa10.56□□□□□ -0.72
LIMS4-203ENST00000632758 M0R381 172 aa10.56□□□□□ -0.72
LIMS4-203ENST00000632758 NTF3P20783 257 aa10.56□□□□□ -0.72
LIMS4-203ENST00000632758 DAZ2Q13117 558 aaKnown RBP10.56□□□□□ -0.72
LIMS4-203ENST00000632758 SPXQ9BT56 116 aa10.56□□□□□ -0.72
LIMS4-203ENST00000632758 M0R2P5 195 aa10.56□□□□□ -0.72
LIMS4-203ENST00000632758 ZNF876PQ49A33 203 aa10.56□□□□□ -0.72
LIMS4-203ENST00000632758 SPANXN1Q5VSR9 72 aa10.56□□□□□ -0.72
LIMS4-203ENST00000632758 Q6ZTI0 123 aa10.56□□□□□ -0.72
LIMS4-203ENST00000632758 TENM3Q9P273 2699 aa10.55□□□□□ -0.72
LIMS4-203ENST00000632758 TRGV1A0A0A0MS02 117 aa10.55□□□□□ -0.72
LIMS4-203ENST00000632758 A0A0J9YWU9 116 aa10.55□□□□□ -0.72
LIMS4-203ENST00000632758 CXorf65A6NEN9 183 aa10.55□□□□□ -0.72
LIMS4-203ENST00000632758 FAM222AQ5U5X8 452 aa10.55□□□□□ -0.72
LIMS4-203ENST00000632758 MRPL54Q6P161 138 aaKnown RBP10.55□□□□□ -0.72
LIMS4-203ENST00000632758 KCNIP4Q6PIL6 250 aa10.55□□□□□ -0.72
LIMS4-203ENST00000632758 JPT2Q9H910 190 aa10.55□□□□□ -0.72
LIMS4-203ENST00000632758 SMCO4Q9NRQ5 59 aa10.55□□□□□ -0.72
LIMS4-203ENST00000632758 CELA1Q9UNI1 258 aa10.55□□□□□ -0.72
LIMS4-203ENST00000632758 MUC4Q99102 2169 aa10.54□□□□□ -0.72
LIMS4-203ENST00000632758 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
LIMS4-203ENST00000632758 S100PP25815 95 aa10.54□□□□□ -0.72
LIMS4-203ENST00000632758 ELOBQ15370 118 aa10.54□□□□□ -0.72
LIMS4-203ENST00000632758 TWIST1Q15672 202 aa10.54□□□□□ -0.72
LIMS4-203ENST00000632758 CNFNQ9BYD5 112 aa10.54□□□□□ -0.72
LIMS4-203ENST00000632758 DKK2Q9UBU2 259 aa10.54□□□□□ -0.72
LIMS4-203ENST00000632758 IGHV4-4A0A075B6R2 117 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 TGIF2-C20orf24A0A0A6YYL0 155 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 GAGE12BA1L429 117 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 GAGE7O76087 117 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 CACNG7P62955 275 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 WDR73Q6P4I2 378 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 ZFP82Q8N141 532 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 RASL10AQ92737 203 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 YPEL4Q96NS1 127 aa10.53□□□□□ -0.72
LIMS4-203ENST00000632758 NXPH4O95158 308 aa10.52□□□□□ -0.72
LIMS4-203ENST00000632758 NHLRC4P0CG21 123 aaPredicted RBP10.52□□□□□ -0.72
LIMS4-203ENST00000632758 DEFB130BP0DP73 79 aa10.52□□□□□ -0.72
LIMS4-203ENST00000632758 DEFB130AP0DP74 79 aa10.52□□□□□ -0.72
LIMS4-203ENST00000632758 PTH2Q96A98 100 aa10.52□□□□□ -0.72
LIMS4-203ENST00000632758 BORCS7Q96B45 105 aa10.52□□□□□ -0.72
LIMS4-203ENST00000632758 BTF3L4Q96K17 158 aa10.52□□□□□ -0.72
LIMS4-203ENST00000632758 CAMPP49913 170 aa10.52□□□□□ -0.73
LIMS4-203ENST00000632758 RIGQ13278 110 aa10.52□□□□□ -0.73
LIMS4-203ENST00000632758 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.73
LIMS4-203ENST00000632758 POM121L12Q8N7R1 296 aa10.52□□□□□ -0.73
LIMS4-203ENST00000632758 SYT8Q8NBV8 401 aa10.52□□□□□ -0.73
LIMS4-203ENST00000632758 SAMD10Q9BYL1 202 aa10.52□□□□□ -0.73
LIMS4-203ENST00000632758 C11orf68Q9H3H3 251 aaKnown RBP10.52□□□□□ -0.73
LIMS4-203ENST00000632758 A0A1B0GXF2 115 aa10.51□□□□□ -0.73
LIMS4-203ENST00000632758 LYRM9A8MSI8 78 aa10.51□□□□□ -0.73
LIMS4-203ENST00000632758 LINC00612Q8N6U2 182 aa10.51□□□□□ -0.73
LIMS4-203ENST00000632758 SPART-AS1P0CW21 52 aa10.5□□□□□ -0.73
LIMS4-203ENST00000632758 EVI2AP22794 236 aa10.5□□□□□ -0.73
LIMS4-203ENST00000632758 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
LIMS4-203ENST00000632758 FBN3Q75N90 2809 aa10.5□□□□□ -0.73
LIMS4-203ENST00000632758 TRAV9-1A0A075B6T8 112 aa10.49□□□□□ -0.73
LIMS4-203ENST00000632758 A0A087WWL8 130 aa10.49□□□□□ -0.73
LIMS4-203ENST00000632758 IGHV3-53P01767 116 aa10.49□□□□□ -0.73
LIMS4-203ENST00000632758 COL7A1Q02388 2944 aa10.49□□□□□ -0.73
LIMS4-203ENST00000632758 TRBV24-1A0A075B6N3 115 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 TRGV2A0A075B6R0 118 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 IGHV3-73A0A0B4J1V6 119 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 RS1O15537 224 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 CRYGDP07320 174 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 HBBP68871 147 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 C12orf74Q32Q52 190 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 PIK3CD-AS1Q5SR53 167 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 CFAP126Q5VTH2 177 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 ATP5L2Q7Z4Y8 100 aa10.48□□□□□ -0.73
LIMS4-203ENST00000632758 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms