RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 NIT2Q9NQR4 276 aa14.04□□□□□ -0.16
CNOT9-209ENST00000627282 JOSD1Q15040 202 aaPredicted RBP14.03□□□□□ -0.16
CNOT9-209ENST00000627282 IQCJQ1A5X6 159 aa14.03□□□□□ -0.16
CNOT9-209ENST00000627282 RCHY1Q96PM5 261 aa14.03□□□□□ -0.16
CNOT9-209ENST00000627282 DNAH9Q9NYC9 4486 aa14.02□□□□□ -0.16
CNOT9-209ENST00000627282 TRAV21A0A0B4J279 112 aa14.02□□□□□ -0.16
CNOT9-209ENST00000627282 KCNS1Q96KK3 526 aa14.02□□□□□ -0.16
CNOT9-209ENST00000627282 GPX1P07203 203 aa14.01□□□□□ -0.17
CNOT9-209ENST00000627282 TENM3Q9P273 2699 aa14.01□□□□□ -0.17
CNOT9-209ENST00000627282 Q6ZQT7 251 aa14.01□□□□□ -0.17
CNOT9-209ENST00000627282 RPL35AP18077 110 aaKnown RBP14□□□□□ -0.17
CNOT9-209ENST00000627282 NTF3P20783 257 aa14□□□□□ -0.17
CNOT9-209ENST00000627282 TWIST1Q15672 202 aa14□□□□□ -0.17
CNOT9-209ENST00000627282 FAM104BQ5XKR9 115 aa14□□□□□ -0.17
CNOT9-209ENST00000627282 FOXI2Q6ZQN5 318 aa14□□□□□ -0.17
CNOT9-209ENST00000627282 ODF3Q96PU9 254 aa14□□□□□ -0.17
CNOT9-209ENST00000627282 SAMD10Q9BYL1 202 aa14□□□□□ -0.17
CNOT9-209ENST00000627282 MUC21A0A0G2JKD1 596 aa13.99□□□□□ -0.17
CNOT9-209ENST00000627282 A0A0J9YX75 114 aa13.99□□□□□ -0.17
CNOT9-209ENST00000627282 MUC21A0A140T8X8 626 aa13.99□□□□□ -0.17
CNOT9-209ENST00000627282 H3BMM0 161 aa13.99□□□□□ -0.17
CNOT9-209ENST00000627282 HLA-DRB4P13762 266 aa13.99□□□□□ -0.17
CNOT9-209ENST00000627282 MUC21Q5SSG8 566 aa13.99□□□□□ -0.17
CNOT9-209ENST00000627282 TRPT1Q86TN4 253 aaKnown RBP13.99□□□□□ -0.17
CNOT9-209ENST00000627282 HLA-DRB4X5D2U9 266 aa13.99□□□□□ -0.17
CNOT9-209ENST00000627282 KLLNB2CW77 178 aa13.98□□□□□ -0.17
CNOT9-209ENST00000627282 J3KRW8 73 aa13.98□□□□□ -0.17
CNOT9-209ENST00000627282 RNASE4P34096 147 aaKnown RBP13.98□□□□□ -0.17
CNOT9-209ENST00000627282 SBSPONQ8IVN8 264 aa13.98□□□□□ -0.17
CNOT9-209ENST00000627282 STHQ8IWL8 128 aa13.98□□□□□ -0.17
CNOT9-209ENST00000627282 SNAI2O43623 268 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 ZNF324O75467 553 aaPredicted RBP13.97□□□□□ -0.17
CNOT9-209ENST00000627282 OR5AL1P0C617 328 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 SSTP61278 116 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 CDPF1Q6NVV7 123 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 EBLN2Q6P2I7 272 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 NIT1Q86X76 327 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 TMEM191AQ9H0A3 160 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 U3KQK5 164 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 DUSP14O95147 198 aaKnown RBP13.97□□□□□ -0.17
CNOT9-209ENST00000627282 LEPP41159 167 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 DMRTA1Q5VZB9 504 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 URB1-AS1Q96HZ7 61 aa13.97□□□□□ -0.17
CNOT9-209ENST00000627282 AMTP48728 403 aa13.96□□□□□ -0.17
CNOT9-209ENST00000627282 Q6ZWC4 215 aa13.96□□□□□ -0.17
CNOT9-209ENST00000627282 AMN1Q8IY45 258 aa13.96□□□□□ -0.17
CNOT9-209ENST00000627282 IGHV4-4A0A075B6R2 117 aa13.95□□□□□ -0.18
CNOT9-209ENST00000627282 PCP4L1A6NKN8 68 aa13.95□□□□□ -0.18
CNOT9-209ENST00000627282 CACNG7P62955 275 aa13.95□□□□□ -0.18
CNOT9-209ENST00000627282 KIR3DS1Q14943 382 aa13.95□□□□□ -0.18
CNOT9-209ENST00000627282 CHCHD1Q96BP2 118 aaKnown RBP13.95□□□□□ -0.18
CNOT9-209ENST00000627282 MSRB1Q9NZV6 116 aa13.95□□□□□ -0.18
CNOT9-209ENST00000627282 HUWE1Q7Z6Z7 4374 aaKnown RBP13.94□□□□□ -0.18
CNOT9-209ENST00000627282 IGKV3-20P01619 116 aa13.94□□□□□ -0.18
CNOT9-209ENST00000627282 PMCHP20382 165 aa13.94□□□□□ -0.18
CNOT9-209ENST00000627282 S100A12P80511 92 aa13.94□□□□□ -0.18
CNOT9-209ENST00000627282 ANXA2RQ3ZCQ2 193 aa13.94□□□□□ -0.18
CNOT9-209ENST00000627282 MRPL51Q4U2R6 128 aaKnown RBP13.94□□□□□ -0.18
CNOT9-209ENST00000627282 RNASEKQ6P5S7 137 aaKnown RBP13.94□□□□□ -0.18
CNOT9-209ENST00000627282 NAGKQ9UJ70 344 aa13.94□□□□□ -0.18
CNOT9-209ENST00000627282 KIR2DL5BA0A0G2JN68 375 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 KIR2DL5BA0A0G2JPC4 375 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 A8MTW9 85 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 HSBP1O75506 76 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 MED14OSP0DP75 135 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 KIR2DL5AQ8N109 375 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 KIR2DL5BQ8NHK3 375 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 GIG44P09565 113 aaPredicted RBP13.93□□□□□ -0.18
CNOT9-209ENST00000627282 OR10AG1Q8NH19 301 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 RNF185Q96GF1 192 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 WWC2-AS2Q96NR7 200 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 CLUHP3Q96NS8 147 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 CSTL1Q9H114 145 aa13.93□□□□□ -0.18
CNOT9-209ENST00000627282 LINC00614P0C842 121 aa13.92□□□□□ -0.18
CNOT9-209ENST00000627282 ASIPP42127 132 aa13.92□□□□□ -0.18
CNOT9-209ENST00000627282 APOC4P55056 127 aa13.92□□□□□ -0.18
CNOT9-209ENST00000627282 AMTNQ6UX39 209 aa13.92□□□□□ -0.18
CNOT9-209ENST00000627282 ORMDL3Q8N138 153 aa13.92□□□□□ -0.18
CNOT9-209ENST00000627282 FAM19A2Q8N3H0 131 aa13.92□□□□□ -0.18
CNOT9-209ENST00000627282 GSN-AS1Q9NRJ2 163 aa13.92□□□□□ -0.18
CNOT9-209ENST00000627282 C7orf71A4D174 169 aa13.91□□□□□ -0.18
CNOT9-209ENST00000627282 D6R8Y8 96 aa13.91□□□□□ -0.18
CNOT9-209ENST00000627282 H3BVH4 76 aa13.91□□□□□ -0.18
CNOT9-209ENST00000627282 RAB4AP20338 218 aa13.91□□□□□ -0.18
CNOT9-209ENST00000627282 TSPOP30536 169 aa13.91□□□□□ -0.18
CNOT9-209ENST00000627282 PRELID3AQ96N28 172 aa13.91□□□□□ -0.18
CNOT9-209ENST00000627282 SCGB1D1O95968 90 aa13.9□□□□□ -0.18
CNOT9-209ENST00000627282 SPANXN1Q5VSR9 72 aa13.9□□□□□ -0.18
CNOT9-209ENST00000627282 TM2D3Q9BRN9 247 aa13.9□□□□□ -0.18
CNOT9-209ENST00000627282 M0R2Z0 102 aa13.9□□□□□ -0.19
CNOT9-209ENST00000627282 S100A4P26447 101 aaKnown RBP13.9□□□□□ -0.19
CNOT9-209ENST00000627282 MORN3Q6PF18 240 aaPredicted RBP13.9□□□□□ -0.19
CNOT9-209ENST00000627282 SMIM15Q7Z3B0 74 aa13.9□□□□□ -0.19
CNOT9-209ENST00000627282 ZMAT4Q9H898 229 aa13.9□□□□□ -0.19
CNOT9-209ENST00000627282 SCRT2Q9NQ03 307 aa13.9□□□□□ -0.19
CNOT9-209ENST00000627282 GNRH2O43555 120 aa13.89□□□□□ -0.19
CNOT9-209ENST00000627282 PPBPP02775 128 aa13.89□□□□□ -0.19
CNOT9-209ENST00000627282 CKS2P33552 79 aa13.89□□□□□ -0.19
CNOT9-209ENST00000627282 CDKN1BP46527 198 aa13.89□□□□□ -0.19
CNOT9-209ENST00000627282 FXYD7P58549 80 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms