RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 CLLU1Q5K131 121 aa0.38□□□□□ -2.35
CDR1-202ENST00000625883 ATP6V0E2Q8NHE4 81 aa0.38□□□□□ -2.35
CDR1-202ENST00000625883 LSM2Q9Y333 95 aaKnown RBP0.38□□□□□ -2.35
CDR1-202ENST00000625883 TRAV2A0A0B4J234 112 aa0.37□□□□□ -2.35
CDR1-202ENST00000625883 RBP4P02753 201 aa0.37□□□□□ -2.35
CDR1-202ENST00000625883 NOP16Q9Y3C1 178 aaKnown RBP0.37□□□□□ -2.35
CDR1-202ENST00000625883 USP24Q9UPU5 2620 aa0.37□□□□□ -2.35
CDR1-202ENST00000625883 UHRF1BP1LA0JNW5 1464 aa0.37□□□□□ -2.35
CDR1-202ENST00000625883 CCDC171Q6TFL3 1326 aa0.37□□□□□ -2.35
CDR1-202ENST00000625883 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
CDR1-202ENST00000625883 SYNJ1O43426 1573 aa0.36□□□□□ -2.35
CDR1-202ENST00000625883 TEX49A0A1B0GTD5 131 aa0.36□□□□□ -2.35
CDR1-202ENST00000625883 MPC1LP0DKB6 136 aa0.36□□□□□ -2.35
CDR1-202ENST00000625883 ATP11AUNQ6ZP68 121 aa0.36□□□□□ -2.35
CDR1-202ENST00000625883 DYNLRB2Q8TF09 96 aa0.36□□□□□ -2.35
CDR1-202ENST00000625883 CASZ1Q86V15 1759 aa0.36□□□□□ -2.35
CDR1-202ENST00000625883 ESPL1Q14674 2120 aa0.36□□□□□ -2.35
CDR1-202ENST00000625883 SLC25A6P12236 298 aa0.35□□□□□ -2.35
CDR1-202ENST00000625883 TSKUQ8WUA8 353 aa0.35□□□□□ -2.35
CDR1-202ENST00000625883 VPS25Q9BRG1 176 aa0.35□□□□□ -2.35
CDR1-202ENST00000625883 M0R2P5 195 aa0.35□□□□□ -2.35
CDR1-202ENST00000625883 ARPC5O15511 151 aa0.35□□□□□ -2.35
CDR1-202ENST00000625883 PYYP10082 97 aa0.35□□□□□ -2.35
CDR1-202ENST00000625883 OR2T2Q6IF00 324 aa0.35□□□□□ -2.35
CDR1-202ENST00000625883 TMEM141Q96I45 108 aa0.35□□□□□ -2.35
CDR1-202ENST00000625883 TNCP24821 2201 aa0.34□□□□□ -2.35
CDR1-202ENST00000625883 MDN1Q9NU22 5596 aa0.34□□□□□ -2.35
CDR1-202ENST00000625883 YPEL1O60688 119 aa0.34□□□□□ -2.36
CDR1-202ENST00000625883 APOC1P02654 83 aa0.34□□□□□ -2.36
CDR1-202ENST00000625883 ELOF1P60002 83 aaKnown RBP0.34□□□□□ -2.36
CDR1-202ENST00000625883 HIST1H1AQ02539 215 aaPredicted RBP0.34□□□□□ -2.36
CDR1-202ENST00000625883 ARHGEF10O15013 1369 aa0.34□□□□□ -2.36
CDR1-202ENST00000625883 RBBP6Q7Z6E9 1792 aaKnown RBP0.34□□□□□ -2.36
CDR1-202ENST00000625883 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
CDR1-202ENST00000625883 PLXNA2O75051 1894 aa0.33□□□□□ -2.36
CDR1-202ENST00000625883 PTPRMP28827 1452 aa0.33□□□□□ -2.36
CDR1-202ENST00000625883 CKS1BP61024 79 aa0.33□□□□□ -2.36
CDR1-202ENST00000625883 EMX2Q04743 252 aa0.33□□□□□ -2.36
CDR1-202ENST00000625883 BATF3Q9NR55 127 aa0.33□□□□□ -2.36
CDR1-202ENST00000625883 SPAG17Q6Q759 2223 aa0.33□□□□□ -2.36
CDR1-202ENST00000625883 TANC1Q9C0D5 1861 aa0.32□□□□□ -2.36
CDR1-202ENST00000625883 J3QLW9 94 aa0.32□□□□□ -2.36
CDR1-202ENST00000625883 IGLC6P0CF74 106 aa0.32□□□□□ -2.36
CDR1-202ENST00000625883 IFI27L1Q96BM0 104 aa0.32□□□□□ -2.36
CDR1-202ENST00000625883 DSCR8Q96T75 97 aa0.32□□□□□ -2.36
CDR1-202ENST00000625883 COA4Q9NYJ1 87 aa0.32□□□□□ -2.36
CDR1-202ENST00000625883 BET1LQ9NYM9 111 aa0.32□□□□□ -2.36
CDR1-202ENST00000625883 UNC13AQ9UPW8 1703 aa0.32□□□□□ -2.36
CDR1-202ENST00000625883 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
CDR1-202ENST00000625883 BDP1A6H8Y1 2624 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 ERCC6Q03468 1493 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 TRBV20-1A0A075B6N2 111 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 TRAV12-2A0A075B6T6 113 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 NCS1P62166 190 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 NDUFA11Q86Y39 141 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 GSKIPQ9P0R6 139 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 CACNA1EQ15878 2313 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 ABCA4P78363 2273 aa0.31□□□□□ -2.36
CDR1-202ENST00000625883 FSIP2Q5CZC0 6907 aa0.3□□□□□ -2.36
CDR1-202ENST00000625883 FAM236AA0A1B0GUQ0 79 aa0.3□□□□□ -2.36
CDR1-202ENST00000625883 FAM236BA0A1B0GV22 79 aa0.3□□□□□ -2.36
CDR1-202ENST00000625883 ZNF670-ZNF695F2Z2N8 137 aa0.3□□□□□ -2.36
CDR1-202ENST00000625883 SPINK6Q6UWN8 80 aa0.3□□□□□ -2.36
CDR1-202ENST00000625883 MMGT1Q8N4V1 131 aa0.3□□□□□ -2.36
CDR1-202ENST00000625883 OVOS2A0A0J9YW53 1432 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 LOC105371267A0A1B0GV96 52 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 TCRBV3S1A0A5B6 114 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 OVOS2Q6IE36 1432 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 PPP1R1CQ8WVI7 109 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 ABCA1O95477 2261 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 CCDC179H3BU77 68 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 M0R129 80 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 LINC00694P0DN24 101 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 NPC2P61916 151 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 SMIM3Q9BZL3 60 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 ERG28Q9UKR5 140 aa0.29□□□□□ -2.36
CDR1-202ENST00000625883 MAP2P11137 1827 aaKnown RBP0.28□□□□□ -2.36
CDR1-202ENST00000625883 A0A087WTM6 91 aa0.28□□□□□ -2.37
CDR1-202ENST00000625883 TSPAN19P0C672 248 aa0.28□□□□□ -2.37
CDR1-202ENST00000625883 ALX1Q15699 326 aa0.28□□□□□ -2.37
CDR1-202ENST00000625883 LINC01545Q5VT33 79 aa0.28□□□□□ -2.37
CDR1-202ENST00000625883 CYP2G1PQ6ZSU1 146 aa0.28□□□□□ -2.37
CDR1-202ENST00000625883 PROK2Q9HC23 129 aa0.28□□□□□ -2.37
CDR1-202ENST00000625883 DISP2A7MBM2 1401 aa0.27□□□□□ -2.37
CDR1-202ENST00000625883 MIC13Q5XKP0 118 aa0.27□□□□□ -2.37
CDR1-202ENST00000625883 VMO1Q7Z5L0 202 aa0.27□□□□□ -2.37
CDR1-202ENST00000625883 ZNF142P52746 1687 aaPredicted RBP0.26□□□□□ -2.37
CDR1-202ENST00000625883 KIF13AQ9H1H9 1805 aa0.26□□□□□ -2.37
CDR1-202ENST00000625883 MCRIP1C9JLW8 97 aa0.26□□□□□ -2.37
CDR1-202ENST00000625883 PITX3O75364 302 aa0.26□□□□□ -2.37
CDR1-202ENST00000625883 CCL3L1P16619 93 aa0.26□□□□□ -2.37
CDR1-202ENST00000625883 NDUFA12Q9UI09 145 aa0.26□□□□□ -2.37
CDR1-202ENST00000625883 CDK5RAP2Q96SN8 1893 aa0.26□□□□□ -2.37
CDR1-202ENST00000625883 MAST4O15021 2626 aa0.25□□□□□ -2.37
CDR1-202ENST00000625883 KDM6BO15054 1643 aa0.25□□□□□ -2.37
CDR1-202ENST00000625883 CTAGE3PQ8IX95 158 aa0.25□□□□□ -2.37
CDR1-202ENST00000625883 LZICQ8WZA0 190 aa0.25□□□□□ -2.37
CDR1-202ENST00000625883 SAR1AQ9NR31 198 aa0.25□□□□□ -2.37
CDR1-202ENST00000625883 PRG4Q92954 1404 aaPredicted RBP0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms