RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 RHEBQ15382 184 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 SPANXN1Q5VSR9 72 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 SAMD13Q5VXD3 122 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 DPPA3Q6W0C5 159 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 C9orf47Q6ZRZ4 202 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 OR4C5Q8NGB2 326 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 SMIM7Q9BQ49 75 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 SAMD10Q9BYL1 202 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 TRBV20OR9-2A0A075B6H5 130 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 A0A087WWC5 75 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 A0A1W2PRE2 83 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 ZNF727A8MUV8 499 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 ZNF324O75467 553 aaPredicted RBP3.27□□□□□ -1.89
SYCP1-210ENST00000618516 ATP5G1P05496 136 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 PFN1P07737 140 aaKnown RBP3.27□□□□□ -1.89
SYCP1-210ENST00000618516 HOXA5P20719 270 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 CRIP1P50238 77 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 CEMP1Q6PRD7 247 aaPredicted RBP3.27□□□□□ -1.89
SYCP1-210ENST00000618516 OR10AG1Q8NH19 301 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 RNASE8Q8TDE3 154 aaKnown RBP3.27□□□□□ -1.89
SYCP1-210ENST00000618516 TMEM263Q8WUH6 116 aaKnown RBP3.27□□□□□ -1.89
SYCP1-210ENST00000618516 NEU1Q99519 415 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 PYGO2Q9BRQ0 406 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 NDUFAF3Q9BU61 184 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 PARLQ9H300 379 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 SDF2L1Q9HCN8 221 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 MSRB1Q9NZV6 116 aa3.27□□□□□ -1.89
SYCP1-210ENST00000618516 IGKV3D-20A0A0C4DH25 116 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 IGKV3OR2-268A0A0C4DH90 116 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 GAGE12JA6NER3 117 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 C9JQL5 133 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 IFNA1P01562 189 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 IGLV2-11P01706 119 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 ERVFC1-1P60608 527 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 GAGE1Q13065 139 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 GAGE4Q13068 117 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 GAGE5Q13069 117 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 ZNF56Q15929 161 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 GAGE13Q4V321 117 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 C14orf178Q8N769 122 aaPredicted RBP3.26□□□□□ -1.89
SYCP1-210ENST00000618516 C16orf74Q96GX8 76 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 CLUHP3Q96NS8 147 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 C12orf57Q99622 126 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 FABP5P3A8MUU1 101 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 KLLNB2CW77 178 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 PAX4O43316 350 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 SCO1O75880 301 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 GYPEP15421 78 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 FOXA3P55318 350 aaPredicted RBP3.26□□□□□ -1.89
SYCP1-210ENST00000618516 FAM162BQ5T6X4 162 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 Q9HAA7 133 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 TRAV10A0A0B4J240 114 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 TRAV26-2A0A0B4J265 109 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 SERTM2A0A1B0GWG4 89 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 PLAC8L1A1L4L8 177 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 TMEM189A5PLL7 270 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 P01737 135 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 S100A9P06702 114 aaKnown RBP3.26□□□□□ -1.89
SYCP1-210ENST00000618516 ASIPP42127 132 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 PEA15Q15121 130 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 LYPD1Q8N2G4 141 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 Q8N3U1 123 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 OCC1Q8TAD7 63 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 HIST1H2BAQ96A08 127 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 PGLYRP4Q96LB8 373 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 VAX2Q9UIW0 290 aa3.26□□□□□ -1.89
SYCP1-210ENST00000618516 KRTAP4-8A0A0G2JLE6 195 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 NUPR2A6NF83 97 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 COLCA2A8K830 154 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 ZNF253O75346 499 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 CAMPP49913 170 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 SAPCD1Q5SSQ6 148 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 CLPSL2Q6UWE3 100 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 TP53TG1Q9Y2A0 90 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 URGCP-MRPS24S4R325 110 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
SYCP1-210ENST00000618516 C1orf196B1AJZ1 125 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 APOC3P02656 99 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 ZNF506Q5JVG8 444 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 NEGR1Q7Z3B1 354 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 MBD3L1Q8WWY6 194 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 YPEL4Q96NS1 127 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 TMEM242Q9NWH2 141 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 HHLA3Q9XRX5 114 aa3.25□□□□□ -1.89
SYCP1-210ENST00000618516 IGHV3-30P01768 117 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 IGHV3-33P01772 117 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 IGHV3-30-3P0DP02 117 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 IGHV3-30-5P0DP03 117 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 EVI2AP22794 236 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 TWIST1Q15672 202 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 FAM74A3Q4VXF1 159 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 Q6ZSN1 163 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 TMEM256Q8N2U0 113 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 MRPL53Q96EL3 112 aaKnown RBP3.24□□□□□ -1.89
SYCP1-210ENST00000618516 FMC1Q96HJ9 113 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 MANBALQ9NQG1 85 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 TMEM262E9PQX1 116 aa3.24□□□□□ -1.89
SYCP1-210ENST00000618516 C3orf84H3BNL1 204 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms