RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 Q6AWC8 147 aa12.61□□□□□ -0.39
CNOT3-208ENST00000613073 ZNF418Q8TF45 676 aaPredicted RBP12.61□□□□□ -0.39
CNOT3-208ENST00000613073 DPM2O94777 84 aa12.61□□□□□ -0.39
CNOT3-208ENST00000613073 TRGV3P03979 118 aa12.61□□□□□ -0.39
CNOT3-208ENST00000613073 NFE4Q86UQ8 179 aa12.61□□□□□ -0.39
CNOT3-208ENST00000613073 Q8TAT8 98 aa12.61□□□□□ -0.39
CNOT3-208ENST00000613073 MAP1LC3AQ9H492 121 aa12.61□□□□□ -0.39
CNOT3-208ENST00000613073 CLPSL1A2RUU4 121 aa12.6□□□□□ -0.39
CNOT3-208ENST00000613073 CYSLTR1Q9Y271 337 aa12.6□□□□□ -0.39
CNOT3-208ENST00000613073 MXRA5Q9NR99 2828 aa12.6□□□□□ -0.39
CNOT3-208ENST00000613073 TRBV7-1A0A0A6YYK4 115 aa12.59□□□□□ -0.39
CNOT3-208ENST00000613073 BUB3O43684 328 aa12.59□□□□□ -0.39
CNOT3-208ENST00000613073 KRTAP10-9P60411 292 aa12.59□□□□□ -0.39
CNOT3-208ENST00000613073 KLK9Q2XQG4 91 aa12.59□□□□□ -0.39
CNOT3-208ENST00000613073 KLK9Q9UKQ9 250 aa12.59□□□□□ -0.39
CNOT3-208ENST00000613073 SMCPP49901 116 aaPredicted RBP12.58□□□□□ -0.39
CNOT3-208ENST00000613073 ZMAT4Q9H898 229 aa12.58□□□□□ -0.39
CNOT3-208ENST00000613073 PGPEP1Q9NXJ5 209 aa12.58□□□□□ -0.39
CNOT3-208ENST00000613073 LOC107984156A0A0G2JMH3 177 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 A6NDX4 124 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 TGFAP01135 160 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 TRBV12-3P01733 135 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 IGHG4P01861 327 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 C19orf54Q5BKX5 351 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 ARL17AQ8IVW1 177 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 RNF182Q8N6D2 247 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 TRBV6-1A0A0K0K1D8 114 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 IGHV3-11P01762 117 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 Q6ZUT4 128 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 C1QTNF4Q9BXJ3 329 aa12.58□□□□□ -0.4
CNOT3-208ENST00000613073 TEX15Q9BXT5 2789 aa12.57□□□□□ -0.4
CNOT3-208ENST00000613073 DSCR9P59020 149 aa12.57□□□□□ -0.4
CNOT3-208ENST00000613073 ANXA2RQ3ZCQ2 193 aa12.57□□□□□ -0.4
CNOT3-208ENST00000613073 TNFRSF6BO95407 300 aa12.57□□□□□ -0.4
CNOT3-208ENST00000613073 PSMB2P49721 201 aa12.57□□□□□ -0.4
CNOT3-208ENST00000613073 KLK15Q9H2R5 256 aa12.57□□□□□ -0.4
CNOT3-208ENST00000613073 ZNF80P51504 273 aaPredicted RBP12.56□□□□□ -0.4
CNOT3-208ENST00000613073 SHISA2Q6UWI4 295 aa12.56□□□□□ -0.4
CNOT3-208ENST00000613073 ZNF469Q96JG9 3925 aaPredicted RBP12.56□□□□□ -0.4
CNOT3-208ENST00000613073 ORM1P02763 201 aa12.56□□□□□ -0.4
CNOT3-208ENST00000613073 SLC25A16P16260 332 aa12.56□□□□□ -0.4
CNOT3-208ENST00000613073 RNF185Q96GF1 192 aa12.56□□□□□ -0.4
CNOT3-208ENST00000613073 METTL26Q96S19 204 aa12.56□□□□□ -0.4
CNOT3-208ENST00000613073 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 RNF223E7ERA6 249 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 IGHG2P01859 326 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 IGF1P05019 195 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 MORN3Q6PF18 240 aaPredicted RBP12.55□□□□□ -0.4
CNOT3-208ENST00000613073 LINC01356Q8N9X3 169 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 PRSS29PA6NIE9 313 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 FAM223BA6NKX1 122 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 PRAC2D3DTV9 90 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 PF4V1P10720 104 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 ARL3P36405 182 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 ERCC8Q13216 396 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 FAM223AQ8IWN6 122 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 ANAPC13Q9BS18 74 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 APCP25054 2843 aa12.55□□□□□ -0.4
CNOT3-208ENST00000613073 B5MCH6 92 aa12.54□□□□□ -0.4
CNOT3-208ENST00000613073 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.54□□□□□ -0.4
CNOT3-208ENST00000613073 ZFP2Q6ZN57 461 aa12.54□□□□□ -0.4
CNOT3-208ENST00000613073 CREBBPQ92793 2442 aa12.54□□□□□ -0.4
CNOT3-208ENST00000613073 TSPAN13O95857 204 aa12.54□□□□□ -0.4
CNOT3-208ENST00000613073 DEFB112Q30KQ8 113 aa12.54□□□□□ -0.4
CNOT3-208ENST00000613073 UNQ9165/PRO28630Q6UXU0 137 aa12.54□□□□□ -0.4
CNOT3-208ENST00000613073 CHD6Q8TD26 2715 aa12.54□□□□□ -0.4
CNOT3-208ENST00000613073 IGHV4-59P01825 116 aa12.53□□□□□ -0.4
CNOT3-208ENST00000613073 CRIP2P52943 208 aaPredicted RBP12.53□□□□□ -0.4
CNOT3-208ENST00000613073 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
CNOT3-208ENST00000613073 PRR25Q96S07 402 aa12.53□□□□□ -0.4
CNOT3-208ENST00000613073 TLN2Q9Y4G6 2542 aa12.53□□□□□ -0.4
CNOT3-208ENST00000613073 A0A096LNT2 108 aa12.53□□□□□ -0.4
CNOT3-208ENST00000613073 TRAV26-2A0A0B4J265 109 aa12.53□□□□□ -0.4
CNOT3-208ENST00000613073 LINC01549A6NIU2 74 aa12.53□□□□□ -0.4
CNOT3-208ENST00000613073 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
CNOT3-208ENST00000613073 ERG28Q9UKR5 140 aa12.53□□□□□ -0.4
CNOT3-208ENST00000613073 KIR2DL4Q99706 377 aa12.52□□□□□ -0.4
CNOT3-208ENST00000613073 TRBV7-3A0A075B6L6 115 aa12.52□□□□□ -0.41
CNOT3-208ENST00000613073 H3BVH4 76 aa12.52□□□□□ -0.41
CNOT3-208ENST00000613073 TMEM190Q8WZ59 177 aa12.52□□□□□ -0.41
CNOT3-208ENST00000613073 UFC1Q9Y3C8 167 aa12.52□□□□□ -0.41
CNOT3-208ENST00000613073 TENM4Q6N022 2769 aa12.52□□□□□ -0.41
CNOT3-208ENST00000613073 ATP5LO75964 103 aa12.52□□□□□ -0.41
CNOT3-208ENST00000613073 HLA-DRB4P13762 266 aa12.51□□□□□ -0.41
CNOT3-208ENST00000613073 DLX4Q92988 240 aaPredicted RBP12.51□□□□□ -0.41
CNOT3-208ENST00000613073 HLA-DRB4X5D2U9 266 aa12.51□□□□□ -0.41
CNOT3-208ENST00000613073 MYOZ3Q8TDC0 251 aa12.51□□□□□ -0.41
CNOT3-208ENST00000613073 NXT2Q9NPJ8 142 aaKnown RBP12.51□□□□□ -0.41
CNOT3-208ENST00000613073 CARD19Q96LW7 228 aa12.5□□□□□ -0.41
CNOT3-208ENST00000613073 OR11H12B2RN74 326 aa12.49□□□□□ -0.41
CNOT3-208ENST00000613073 TAL2Q16559 108 aa12.49□□□□□ -0.41
CNOT3-208ENST00000613073 OR11H1Q8NG94 326 aa12.49□□□□□ -0.41
CNOT3-208ENST00000613073 OR11H2Q8NH07 326 aa12.49□□□□□ -0.41
CNOT3-208ENST00000613073 TRAV8-2A0A0B4J237 113 aa12.49□□□□□ -0.41
CNOT3-208ENST00000613073 U3KQE9 123 aa12.48□□□□□ -0.41
CNOT3-208ENST00000613073 IGLC6P0CF74 106 aa12.48□□□□□ -0.41
CNOT3-208ENST00000613073 C10orf99Q6UWK7 81 aa12.48□□□□□ -0.41
CNOT3-208ENST00000613073 IL17RELQ6ZVW7 336 aa12.48□□□□□ -0.41
CNOT3-208ENST00000613073 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
CNOT3-208ENST00000613073 CCDC168Q8NDH2 2452 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms