RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 SPANXN1Q5VSR9 72 aa12.71□□□□□ -0.38
SREK1-216ENST00000612404 ATP5L2Q7Z4Y8 100 aa12.71□□□□□ -0.38
SREK1-216ENST00000612404 K7EIL1 84 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 RAB5AP20339 215 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 NTF3P20783 257 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 ZNF415Q09FC8 603 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 TWIST1Q15672 202 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 M0R381 172 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 RAB4BP61018 213 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 HBBP68871 147 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 DEFB121Q5J5C9 76 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 RCHY1Q96PM5 261 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 SCRT2Q9NQ03 307 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 GSN-AS1Q9NRJ2 163 aa12.7□□□□□ -0.38
SREK1-216ENST00000612404 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
SREK1-216ENST00000612404 RRN3P1Q2M238 152 aa12.69□□□□□ -0.38
SREK1-216ENST00000612404 C9orf85Q96MD7 179 aa12.69□□□□□ -0.38
SREK1-216ENST00000612404 A0A1B0GXF2 115 aa12.68□□□□□ -0.38
SREK1-216ENST00000612404 TMEM263Q8WUH6 116 aaKnown RBP12.68□□□□□ -0.38
SREK1-216ENST00000612404 CNFNQ9BYD5 112 aa12.68□□□□□ -0.38
SREK1-216ENST00000612404 MSRB1Q9NZV6 116 aa12.68□□□□□ -0.38
SREK1-216ENST00000612404 MUC4Q99102 2169 aa12.68□□□□□ -0.38
SREK1-216ENST00000612404 CACNG7P62955 275 aa12.68□□□□□ -0.38
SREK1-216ENST00000612404 Q6ZWC4 215 aa12.68□□□□□ -0.38
SREK1-216ENST00000612404 C11orf72Q8NBR9 251 aa12.68□□□□□ -0.38
SREK1-216ENST00000612404 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
SREK1-216ENST00000612404 DMRTA1Q5VZB9 504 aa12.67□□□□□ -0.38
SREK1-216ENST00000612404 WDR73Q6P4I2 378 aa12.67□□□□□ -0.38
SREK1-216ENST00000612404 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
SREK1-216ENST00000612404 ZFP82Q8N141 532 aa12.67□□□□□ -0.38
SREK1-216ENST00000612404 C16orf74Q96GX8 76 aa12.67□□□□□ -0.38
SREK1-216ENST00000612404 A0A1B0GW15 77 aa12.66□□□□□ -0.38
SREK1-216ENST00000612404 SNURFLB1AK76 121 aa12.66□□□□□ -0.38
SREK1-216ENST00000612404 OR11H2Q8NH07 326 aa12.66□□□□□ -0.38
SREK1-216ENST00000612404 RNF183Q96D59 192 aa12.66□□□□□ -0.38
SREK1-216ENST00000612404 X6R8D5 127 aa12.66□□□□□ -0.38
SREK1-216ENST00000612404 S100A8P05109 93 aa12.65□□□□□ -0.38
SREK1-216ENST00000612404 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
SREK1-216ENST00000612404 ZNF876PQ49A33 203 aa12.65□□□□□ -0.38
SREK1-216ENST00000612404 ZNF493Q6ZR52 646 aa12.65□□□□□ -0.38
SREK1-216ENST00000612404 TMEM136Q6ZRR5 245 aa12.65□□□□□ -0.38
SREK1-216ENST00000612404 SYT8Q8NBV8 401 aa12.65□□□□□ -0.38
SREK1-216ENST00000612404 FRZBQ92765 325 aa12.65□□□□□ -0.38
SREK1-216ENST00000612404 GNB1LQ9BYB4 327 aa12.65□□□□□ -0.38
SREK1-216ENST00000612404 EMP1P54849 157 aa12.64□□□□□ -0.39
SREK1-216ENST00000612404 SPXQ9BT56 116 aa12.64□□□□□ -0.39
SREK1-216ENST00000612404 TRAPPC1Q9Y5R8 145 aa12.64□□□□□ -0.39
SREK1-216ENST00000612404 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
SREK1-216ENST00000612404 M0R2P5 195 aa12.64□□□□□ -0.39
SREK1-216ENST00000612404 COX19Q49B96 90 aa12.64□□□□□ -0.39
SREK1-216ENST00000612404 MRAPQ8TCY5 172 aa12.63□□□□□ -0.39
SREK1-216ENST00000612404 NOP10Q9NPE3 64 aaKnown RBP12.63□□□□□ -0.39
SREK1-216ENST00000612404 NXPH4O95158 308 aa12.62□□□□□ -0.39
SREK1-216ENST00000612404 SMIM15Q7Z3B0 74 aa12.62□□□□□ -0.39
SREK1-216ENST00000612404 RETNQ9HD89 108 aa12.62□□□□□ -0.39
SREK1-216ENST00000612404 MRPL16Q9NX20 251 aaKnown RBP12.62□□□□□ -0.39
SREK1-216ENST00000612404 PLAC8L1A1L4L8 177 aa12.62□□□□□ -0.39
SREK1-216ENST00000612404 HLA-DQA1P01909 254 aa12.62□□□□□ -0.39
SREK1-216ENST00000612404 MT-ND6P03923 174 aa12.62□□□□□ -0.39
SREK1-216ENST00000612404 TRGC2P03986 189 aa12.62□□□□□ -0.39
SREK1-216ENST00000612404 EVI2AP22794 236 aa12.62□□□□□ -0.39
SREK1-216ENST00000612404 FABP9Q0Z7S8 132 aa12.62□□□□□ -0.39
SREK1-216ENST00000612404 MRPL18Q9H0U6 180 aaKnown RBP12.62□□□□□ -0.39
SREK1-216ENST00000612404 TRGC1P0CF51 173 aa12.61□□□□□ -0.39
SREK1-216ENST00000612404 SBSPONQ8IVN8 264 aa12.61□□□□□ -0.39
SREK1-216ENST00000612404 IL17DQ8TAD2 202 aa12.61□□□□□ -0.39
SREK1-216ENST00000612404 AP1S3Q96PC3 154 aa12.61□□□□□ -0.39
SREK1-216ENST00000612404 OVOL2Q9BRP0 275 aa12.61□□□□□ -0.39
SREK1-216ENST00000612404 TRGV1A0A0A0MS02 117 aa12.61□□□□□ -0.39
SREK1-216ENST00000612404 C14orf178Q8N769 122 aaPredicted RBP12.61□□□□□ -0.39
SREK1-216ENST00000612404 TMEM191AQ9H0A3 160 aa12.61□□□□□ -0.39
SREK1-216ENST00000612404 JPT2Q9H910 190 aa12.61□□□□□ -0.39
SREK1-216ENST00000612404 TP53TG1Q9Y2A0 90 aa12.61□□□□□ -0.39
SREK1-216ENST00000612404 DEFB4AO15263 64 aa12.6□□□□□ -0.39
SREK1-216ENST00000612404 APCSP02743 223 aa12.6□□□□□ -0.39
SREK1-216ENST00000612404 SLAQ13239 276 aa12.6□□□□□ -0.39
SREK1-216ENST00000612404 IGHV4-28A0A0C4DH34 117 aa12.59□□□□□ -0.39
SREK1-216ENST00000612404 DAZ2Q13117 558 aaKnown RBP12.59□□□□□ -0.39
SREK1-216ENST00000612404 AMN1Q8IY45 258 aa12.59□□□□□ -0.39
SREK1-216ENST00000612404 MIFP14174 115 aa12.59□□□□□ -0.39
SREK1-216ENST00000612404 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
SREK1-216ENST00000612404 MEGF8Q7Z7M0 2845 aa12.58□□□□□ -0.39
SREK1-216ENST00000612404 A0A087WWL8 130 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 SMIM17P0DL12 118 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 KIAA1644Q3SXP7 199 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 Q6ZTI0 123 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 PTH2Q96A98 100 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 TENM3Q9P273 2699 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 FAM74A4Q5TZK3 123 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 FAM104BQ5XKR9 115 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 Q8NAQ8 132 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 RASL10AQ92737 203 aa12.58□□□□□ -0.4
SREK1-216ENST00000612404 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
SREK1-216ENST00000612404 TMA7Q9Y2S6 64 aaKnown RBP12.57□□□□□ -0.4
SREK1-216ENST00000612404 C1orf196B1AJZ1 125 aa12.56□□□□□ -0.4
SREK1-216ENST00000612404 LGALS9BQ3B8N2 356 aa12.56□□□□□ -0.4
SREK1-216ENST00000612404 SAMD10Q9BYL1 202 aa12.56□□□□□ -0.4
SREK1-216ENST00000612404 GAGE12BA1L429 117 aa12.56□□□□□ -0.4
SREK1-216ENST00000612404 GAGE7O76087 117 aa12.56□□□□□ -0.4
SREK1-216ENST00000612404 MGPP08493 103 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms