RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 WFDC10BQ8IUB3 73 aa9.67□□□□□ -0.86
HLCS-207ENST00000612277 MCM3APO60318 1980 aa9.67□□□□□ -0.86
HLCS-207ENST00000612277 IGHV4-30-2A0A087WSY4 118 aa9.67□□□□□ -0.86
HLCS-207ENST00000612277 SPRY2O43597 315 aa9.67□□□□□ -0.86
HLCS-207ENST00000612277 SPATA12Q7Z6I5 190 aa9.67□□□□□ -0.86
HLCS-207ENST00000612277 TRBV27A0A0K0K1C4 114 aa9.66□□□□□ -0.86
HLCS-207ENST00000612277 SMIM26A0A096LP01 95 aa9.66□□□□□ -0.86
HLCS-207ENST00000612277 SPTBP11277 2137 aa9.66□□□□□ -0.86
HLCS-207ENST00000612277 SMIM9A6NGZ8 99 aa9.66□□□□□ -0.86
HLCS-207ENST00000612277 ODF1Q14990 250 aa9.66□□□□□ -0.86
HLCS-207ENST00000612277 RGPD3A6NKT7 1758 aaPredicted RBP9.66□□□□□ -0.86
HLCS-207ENST00000612277 SPAG11BQ08648 103 aa9.65□□□□□ -0.86
HLCS-207ENST00000612277 DOCK5Q9H7D0 1870 aa9.65□□□□□ -0.86
HLCS-207ENST00000612277 CCDC179H3BU77 68 aa9.65□□□□□ -0.87
HLCS-207ENST00000612277 COL24A1Q17RW2 1714 aa9.65□□□□□ -0.87
HLCS-207ENST00000612277 IGLV3-19P01714 112 aa9.64□□□□□ -0.87
HLCS-207ENST00000612277 LY6HO94772 140 aa9.64□□□□□ -0.87
HLCS-207ENST00000612277 PLXNB2O15031 1838 aa9.64□□□□□ -0.87
HLCS-207ENST00000612277 E7EQL1 145 aa9.64□□□□□ -0.87
HLCS-207ENST00000612277 LINC00694P0DN24 101 aa9.64□□□□□ -0.87
HLCS-207ENST00000612277 COX7CP15954 63 aa9.64□□□□□ -0.87
HLCS-207ENST00000612277 CCL18P55774 89 aa9.64□□□□□ -0.87
HLCS-207ENST00000612277 ZNF236Q9UL36 1845 aa9.63□□□□□ -0.87
HLCS-207ENST00000612277 IMUPQ9GZP8 106 aa9.63□□□□□ -0.87
HLCS-207ENST00000612277 MRPS36P82909 103 aaKnown RBP9.63□□□□□ -0.87
HLCS-207ENST00000612277 FAM19A3Q7Z5A8 133 aa9.63□□□□□ -0.87
HLCS-207ENST00000612277 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
HLCS-207ENST00000612277 A0A0J9YWU9 116 aa9.63□□□□□ -0.87
HLCS-207ENST00000612277 TDRD15B5MCY1 1934 aaKnown RBP9.63□□□□□ -0.87
HLCS-207ENST00000612277 SHANK3Q9BYB0 1731 aa9.63□□□□□ -0.87
HLCS-207ENST00000612277 TRBV7-3A0A075B6L6 115 aa9.62□□□□□ -0.87
HLCS-207ENST00000612277 Q8N9L7 120 aa9.62□□□□□ -0.87
HLCS-207ENST00000612277 LY6DQ14210 128 aa9.62□□□□□ -0.87
HLCS-207ENST00000612277 C15orf65H3BRN8 121 aa9.62□□□□□ -0.87
HLCS-207ENST00000612277 RNF223E7ERA6 249 aa9.62□□□□□ -0.87
HLCS-207ENST00000612277 LRRK1Q38SD2 2015 aa9.61□□□□□ -0.87
HLCS-207ENST00000612277 CABIN1Q9Y6J0 2220 aa9.61□□□□□ -0.87
HLCS-207ENST00000612277 PDCD11Q14690 1871 aaKnown RBP9.61□□□□□ -0.87
HLCS-207ENST00000612277 GP9P14770 177 aa9.61□□□□□ -0.87
HLCS-207ENST00000612277 B3GALT5-AS1P59052 145 aa9.61□□□□□ -0.87
HLCS-207ENST00000612277 CRIPAKQ8N1N5 446 aa9.61□□□□□ -0.87
HLCS-207ENST00000612277 MED14OSP0DP75 135 aa9.6□□□□□ -0.87
HLCS-207ENST00000612277 SPART-AS1P0CW21 52 aa9.6□□□□□ -0.87
HLCS-207ENST00000612277 TMEM263Q8WUH6 116 aaKnown RBP9.6□□□□□ -0.87
HLCS-207ENST00000612277 GTSF1Q8WW33 167 aa9.6□□□□□ -0.87
HLCS-207ENST00000612277 MPDZO75970 2070 aa9.6□□□□□ -0.87
HLCS-207ENST00000612277 LOXP28300 417 aaPredicted RBP9.6□□□□□ -0.87
HLCS-207ENST00000612277 DEFB112Q30KQ8 113 aa9.6□□□□□ -0.87
HLCS-207ENST00000612277 A0A0J9YXY3 114 aa9.6□□□□□ -0.87
HLCS-207ENST00000612277 DOCK4Q8N1I0 1966 aa9.6□□□□□ -0.87
HLCS-207ENST00000612277 J3QLI3 93 aa9.59□□□□□ -0.87
HLCS-207ENST00000612277 Q6ZR03 302 aa9.59□□□□□ -0.87
HLCS-207ENST00000612277 APRG1Q8IVJ8 170 aa9.59□□□□□ -0.87
HLCS-207ENST00000612277 MDFICQ9P1T7 246 aa9.59□□□□□ -0.87
HLCS-207ENST00000612277 COL4A1P02462 1669 aa9.59□□□□□ -0.87
HLCS-207ENST00000612277 ATG2BQ96BY7 2078 aa9.59□□□□□ -0.87
HLCS-207ENST00000612277 P0DMU3 169 aa9.58□□□□□ -0.88
HLCS-207ENST00000612277 FAM231AP0DMU4 169 aa9.58□□□□□ -0.88
HLCS-207ENST00000612277 FAM231CP0DMU5 169 aa9.58□□□□□ -0.88
HLCS-207ENST00000612277 EPOPA6NHQ4 379 aa9.58□□□□□ -0.88
HLCS-207ENST00000612277 F8W735 103 aaPredicted RBP9.58□□□□□ -0.88
HLCS-207ENST00000612277 Q0VFX4 171 aa9.58□□□□□ -0.88
HLCS-207ENST00000612277 HHLA3Q9XRX5 114 aa9.58□□□□□ -0.88
HLCS-207ENST00000612277 RBX1P62877 108 aa9.58□□□□□ -0.88
HLCS-207ENST00000612277 DIAPH2-AS1Q14236 149 aa9.57□□□□□ -0.88
HLCS-207ENST00000612277 KIR2DL5BQ8NHK3 375 aa9.57□□□□□ -0.88
HLCS-207ENST00000612277 CTRLP40313 264 aa9.57□□□□□ -0.88
HLCS-207ENST00000612277 FAM222AQ5U5X8 452 aa9.57□□□□□ -0.88
HLCS-207ENST00000612277 SLPIP03973 132 aa9.57□□□□□ -0.88
HLCS-207ENST00000612277 C1orf147Q96MC9 270 aaPredicted RBP9.57□□□□□ -0.88
HLCS-207ENST00000612277 UBR3Q6ZT12 1888 aa9.57□□□□□ -0.88
HLCS-207ENST00000612277 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
HLCS-207ENST00000612277 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
HLCS-207ENST00000612277 WT1P19544 449 aaPredicted RBP9.56□□□□□ -0.88
HLCS-207ENST00000612277 GPHB5Q86YW7 130 aa9.56□□□□□ -0.88
HLCS-207ENST00000612277 ZFAND3Q9H8U3 227 aa9.56□□□□□ -0.88
HLCS-207ENST00000612277 ATAD5Q96QE3 1844 aa9.56□□□□□ -0.88
HLCS-207ENST00000612277 COLQQ9Y215 455 aaPredicted RBP9.56□□□□□ -0.88
HLCS-207ENST00000612277 COL5A3P25940 1745 aaPredicted RBP9.55□□□□□ -0.88
HLCS-207ENST00000612277 DOCK11Q5JSL3 2073 aa9.55□□□□□ -0.88
HLCS-207ENST00000612277 ARHGEF17Q96PE2 2063 aaPredicted RBP9.55□□□□□ -0.88
HLCS-207ENST00000612277 TNRC6BQ9UPQ9 1833 aaKnown RBP9.55□□□□□ -0.88
HLCS-207ENST00000612277 C9orf85Q96MD7 179 aa9.55□□□□□ -0.88
HLCS-207ENST00000612277 HIGD2AQ9BW72 106 aa9.55□□□□□ -0.88
HLCS-207ENST00000612277 TRBV30A0A0K0K1B3 111 aa9.55□□□□□ -0.88
HLCS-207ENST00000612277 WFDC10AQ9H1F0 79 aa9.55□□□□□ -0.88
HLCS-207ENST00000612277 COL4A5P29400 1685 aa9.55□□□□□ -0.88
HLCS-207ENST00000612277 RP1P56715 2156 aa9.54□□□□□ -0.88
HLCS-207ENST00000612277 CCL24O00175 119 aa9.54□□□□□ -0.88
HLCS-207ENST00000612277 CSRP1P21291 193 aaKnown RBP9.54□□□□□ -0.88
HLCS-207ENST00000612277 C20orf203Q8NBC4 194 aa9.54□□□□□ -0.88
HLCS-207ENST00000612277 LOC285556D6RIA3 1793 aa9.54□□□□□ -0.88
HLCS-207ENST00000612277 THSD7AQ9UPZ6 1657 aa9.54□□□□□ -0.88
HLCS-207ENST00000612277 ESPL1Q14674 2120 aa9.54□□□□□ -0.88
HLCS-207ENST00000612277 MIFP14174 115 aa9.54□□□□□ -0.88
HLCS-207ENST00000612277 MAP1BP46821 2468 aaKnown RBP9.54□□□□□ -0.88
HLCS-207ENST00000612277 CTSGP08311 255 aa9.54□□□□□ -0.88
HLCS-207ENST00000612277 Q96MF0 132 aa9.54□□□□□ -0.88
HLCS-207ENST00000612277 TRIAP1O43715 76 aa9.53□□□□□ -0.88
HLCS-207ENST00000612277 FHL1Q13642 323 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms