RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, human

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EWSR1-221	ENST00000610553	OVOL1	O14753	267 aa		12.9	□□□□□ -0.34
EWSR1-221	ENST00000610553	TRBV12-3	P01733	135 aa		12.9	□□□□□ -0.34
EWSR1-221	ENST00000610553	S100A4	P26447	101 aa	Known RBP	12.9	□□□□□ -0.34
EWSR1-221	ENST00000610553	ANXA2R	Q3ZCQ2	193 aa		12.9	□□□□□ -0.34
EWSR1-221	ENST00000610553	C2orf66	Q6UXQ4	117 aa		12.9	□□□□□ -0.34
EWSR1-221	ENST00000610553		H3BMG7	143 aa		12.9	□□□□□ -0.34
EWSR1-221	ENST00000610553	DEFB1	P60022	68 aa		12.9	□□□□□ -0.34
EWSR1-221	ENST00000610553	WFDC2	Q14508	124 aa		12.9	□□□□□ -0.34
EWSR1-221	ENST00000610553	SPOCK3	Q9BQ16	436 aa		12.9	□□□□□ -0.34
EWSR1-221	ENST00000610553	NDUFA4	O00483	81 aa		12.89	□□□□□ -0.35
EWSR1-221	ENST00000610553	APRG1	Q8IVJ8	170 aa		12.89	□□□□□ -0.35
EWSR1-221	ENST00000610553	USP24	Q9UPU5	2620 aa		12.89	□□□□□ -0.35
EWSR1-221	ENST00000610553	LGALS1	P09382	135 aa	Known RBP	12.89	□□□□□ -0.35
EWSR1-221	ENST00000610553	UBTD1	Q9HAC8	227 aa		12.89	□□□□□ -0.35
EWSR1-221	ENST00000610553	MGP	P08493	103 aa		12.88	□□□□□ -0.35
EWSR1-221	ENST00000610553	RNASE3	P12724	160 aa	Known RBP	12.88	□□□□□ -0.35
EWSR1-221	ENST00000610553	AMTN	Q6UX39	209 aa		12.88	□□□□□ -0.35
EWSR1-221	ENST00000610553	POM121L12	Q8N7R1	296 aa		12.87	□□□□□ -0.35
EWSR1-221	ENST00000610553	PRADC1	Q9BSG0	188 aa		12.87	□□□□□ -0.35
EWSR1-221	ENST00000610553	PRO0461	Q9UI25	63 aa		12.87	□□□□□ -0.35
EWSR1-221	ENST00000610553	CYSLTR1	Q9Y271	337 aa		12.87	□□□□□ -0.35
EWSR1-221	ENST00000610553	PRSS29P	A6NIE9	313 aa		12.87	□□□□□ -0.35
EWSR1-221	ENST00000610553	MORN3	Q6PF18	240 aa	Predicted RBP	12.87	□□□□□ -0.35
EWSR1-221	ENST00000610553	NXPH4	O95158	308 aa		12.86	□□□□□ -0.35
EWSR1-221	ENST00000610553		F6UB75	175 aa		12.85	□□□□□ -0.35
EWSR1-221	ENST00000610553	PPP1R17	O96001	155 aa		12.85	□□□□□ -0.35
EWSR1-221	ENST00000610553	COX6B1	P14854	86 aa		12.85	□□□□□ -0.35
EWSR1-221	ENST00000610553	RNASE4	P34096	147 aa	Known RBP	12.85	□□□□□ -0.35
EWSR1-221	ENST00000610553	ABCA2	Q9BZC7	2435 aa		12.85	□□□□□ -0.35
EWSR1-221	ENST00000610553	CELSR1	Q9NYQ6	3014 aa		12.85	□□□□□ -0.35
EWSR1-221	ENST00000610553	TRBV7-9	A0A0J9YWB2	115 aa		12.85	□□□□□ -0.35
EWSR1-221	ENST00000610553	GNRH2	O43555	120 aa		12.85	□□□□□ -0.35
EWSR1-221	ENST00000610553	ETDB	Q3ZM63	59 aa		12.85	□□□□□ -0.35
EWSR1-221	ENST00000610553	IGHV3OR16-10	A0A075B7F0	116 aa		12.84	□□□□□ -0.35
EWSR1-221	ENST00000610553	MUC4	Q99102	2169 aa		12.84	□□□□□ -0.35
EWSR1-221	ENST00000610553	MYO18B	Q8IUG5	2567 aa		12.84	□□□□□ -0.35
EWSR1-221	ENST00000610553	CRYGD	P07320	174 aa		12.84	□□□□□ -0.35
EWSR1-221	ENST00000610553	GAGE13	Q4V321	117 aa		12.84	□□□□□ -0.35
EWSR1-221	ENST00000610553	SAMD13	Q5VXD3	122 aa		12.84	□□□□□ -0.35
EWSR1-221	ENST00000610553	SH2D6	Q7Z4S9	175 aa		12.84	□□□□□ -0.35
EWSR1-221	ENST00000610553	KIF25-AS1	Q9Y6Z4	181 aa		12.84	□□□□□ -0.35
EWSR1-221	ENST00000610553	ZNF815P	A8K554	130 aa		12.83	□□□□□ -0.36
EWSR1-221	ENST00000610553		J3QR89	54 aa		12.83	□□□□□ -0.36
EWSR1-221	ENST00000610553	DUSP14	O95147	198 aa	Known RBP	12.83	□□□□□ -0.36
EWSR1-221	ENST00000610553	LINC00315	P59091	139 aa		12.83	□□□□□ -0.36
EWSR1-221	ENST00000610553	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.83	□□□□□ -0.36
EWSR1-221	ENST00000610553	BRI3	O95415	125 aa		12.83	□□□□□ -0.36
EWSR1-221	ENST00000610553	RPL32	P62910	135 aa	Known RBP	12.83	□□□□□ -0.36
EWSR1-221	ENST00000610553	CD300E	Q496F6	205 aa	Predicted RBP	12.83	□□□□□ -0.36
EWSR1-221	ENST00000610553	IGHV1-69D	A0A0B4J2H0	117 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	HOXA3	O43365	443 aa	Predicted RBP	12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	TSHB	P01222	138 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	IGHV1-69	P01742	117 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	MTURN	Q8N3F0	131 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	PLEKHB2	Q96CS7	222 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	USMG5	Q96IX5	58 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	USP9X	Q93008	2570 aa	Predicted RBP	12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	CSMD2	Q7Z408	3487 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	IGLV4-69	A0A075B6H9	119 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	IGHV4OR15-8	A0A075B7B6	117 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553		A0A087WW49	117 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	GAGE12H	A6NDE8	117 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553		H3BUA1	57 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	RPL11	P62913	178 aa	Known RBP	12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	SCGB2A2	Q13296	93 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	BRD3OS	Q6XYD6	125 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	SPAG8	Q99932	426 aa	Predicted RBP	12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	PGPEP1	Q9NXJ5	209 aa		12.82	□□□□□ -0.36
EWSR1-221	ENST00000610553	UTP20	O75691	2785 aa	Known RBP	12.81	□□□□□ -0.36
EWSR1-221	ENST00000610553	IGHV3-11	P01762	117 aa		12.81	□□□□□ -0.36
EWSR1-221	ENST00000610553	AZU1	P20160	251 aa		12.81	□□□□□ -0.36
EWSR1-221	ENST00000610553	UBE2D1	P51668	147 aa		12.81	□□□□□ -0.36
EWSR1-221	ENST00000610553	SPATA25	Q9BR10	227 aa		12.81	□□□□□ -0.36
EWSR1-221	ENST00000610553	GTSF1L	Q9H1H1	148 aa		12.81	□□□□□ -0.36
EWSR1-221	ENST00000610553	EPG5	Q9HCE0	2579 aa		12.81	□□□□□ -0.36
EWSR1-221	ENST00000610553	CRYBG3	Q68DQ2	2970 aa		12.81	□□□□□ -0.36
EWSR1-221	ENST00000610553	TMEM238L	A0A1B0GVL6	79 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553		A6NJY4	79 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	KLLN	B2CW77	178 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	SIGMAR1	Q99720	223 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	IGIP	A6NJ69	53 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	C11orf86	A6NJI1	115 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	SCGB1A1	P11684	91 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	SCGB1D4	Q6XE38	83 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	LCNL1	Q6ZST4	164 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	RHPN1-AS1	Q9BWJ2	59 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	TP53TG1	Q9Y2A0	90 aa		12.8	□□□□□ -0.36
EWSR1-221	ENST00000610553	IGHG2	P01859	326 aa		12.79	□□□□□ -0.36
EWSR1-221	ENST00000610553	MRPL16	Q9NX20	251 aa	Known RBP	12.79	□□□□□ -0.36
EWSR1-221	ENST00000610553	MAP1A	P78559	2803 aa	Predicted RBP	12.79	□□□□□ -0.36
EWSR1-221	ENST00000610553	IGKV3-7	A0A075B6H7	116 aa		12.79	□□□□□ -0.36
EWSR1-221	ENST00000610553	POLR2K	P53803	58 aa	Known RBP	12.79	□□□□□ -0.36
EWSR1-221	ENST00000610553	LINC01549	A6NIU2	74 aa		12.78	□□□□□ -0.36
EWSR1-221	ENST00000610553	GNLY	P22749	145 aa		12.78	□□□□□ -0.36
EWSR1-221	ENST00000610553	ZFP2	Q6ZN57	461 aa		12.78	□□□□□ -0.36
EWSR1-221	ENST00000610553	KLHL30-AS1	Q8NEE0	82 aa		12.78	□□□□□ -0.36
EWSR1-221	ENST00000610553	PAPPA-AS1	Q5QFB9	102 aa		12.78	□□□□□ -0.36
EWSR1-221	ENST00000610553	SUMO4	Q6EEV6	95 aa		12.78	□□□□□ -0.36
EWSR1-221	ENST00000610553	IGHV4-39	P01824	125 aa		12.77	□□□□□ -0.36
EWSR1-221	ENST00000610553	CD7	P09564	240 aa		12.77	□□□□□ -0.36

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