RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 POLR2JP52435 117 aaKnown RBP-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 NPC2P61916 151 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 OR8B8Q15620 311 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 Q5BKY6 102 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 TMEM244Q5VVB8 128 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 SLC25A26Q70HW3 274 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 TMEM35BQ8NCS4 154 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 Q96NJ1 140 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 CELSR2Q9HCU4 2923 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 SYNJ1O43426 1573 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 F5P12259 2224 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 TEX49A0A1B0GTD5 131 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 A0A1B0GX51 115 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 PFDN1O60925 122 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 DPM2O94777 84 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 TNFSF15O95150 251 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 AKR1D1P51857 326 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 PLGLB1Q02325 96 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 UNQ5815/PRO19632Q6UWF5 114 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 OR8I2Q8N0Y5 310 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 SLC35B3Q9H1N7 401 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 GINS2Q9Y248 185 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 LSM2Q9Y333 95 aaKnown RBP-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 CADP27708 2225 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 SPAG17Q6Q759 2223 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 F8P00451 2351 aa-0.2□□□□□ -2.44
SNORA28-201ENST00000606769 ZNF142P52746 1687 aaPredicted RBP-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 HMCN2Q8NDA2 5059 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 PNMA8CA0A1B0GUJ8 204 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 C9JAW5 83 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 PAEPP09466 180 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 SCTP09683 121 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 HLA-DRB4P13762 266 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 HIST1H1BP16401 226 aaKnown RBP-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 S100GP29377 79 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 LSM3P62310 102 aaKnown RBP-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 PSPHP78330 225 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 PPDPFLQ8WWR9 84 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 IFI27L1Q96BM0 104 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 TMEM141Q96I45 108 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 DSCR8Q96T75 97 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 BANF2Q9H503 90 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 HIGD1AQ9Y241 93 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 V9GYQ6 96 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 HLA-DRB4X5D2U9 266 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 ASXL3Q9C0F0 2248 aa-0.21□□□□□ -2.44
SNORA28-201ENST00000606769 CACNA1AO00555 2505 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 CDK13Q14004 1512 aaKnown RBP-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 PLXNA1Q9UIW2 1896 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 TRAV12-2A0A075B6T6 113 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 H0YJX3 145 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 DEGS1O15121 323 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 SPINK1P00995 79 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 CCL3L1P16619 93 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 B2MP61769 119 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 SNX29P2Q8IUI4 249 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 DYNLRB2Q8TF09 96 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 TAS2R8Q9NYW2 309 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 CCDC171Q6TFL3 1326 aa-0.22□□□□□ -2.44
SNORA28-201ENST00000606769 MUC22E2RYF6 1773 aaPredicted RBP-0.22□□□□□ -2.45
SNORA28-201ENST00000606769 UNC79Q9P2D8 2635 aa-0.22□□□□□ -2.45
SNORA28-201ENST00000606769 WNK2Q9Y3S1 2297 aa-0.22□□□□□ -2.45
SNORA28-201ENST00000606769 UHRF1BP1LA0JNW5 1464 aa-0.22□□□□□ -2.45
SNORA28-201ENST00000606769 ERCC6Q03468 1493 aa-0.22□□□□□ -2.45
SNORA28-201ENST00000606769 UBR5O95071 2799 aaPredicted RBP-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 UNC13BO14795 1591 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 LAMC3Q9Y6N6 1575 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 CACNA1CQ13936 2221 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 CLPSL1A2RUU4 121 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 M0R2P5 195 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 PITX3O75364 302 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 NMBP08949 121 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 CLLU1Q5K131 121 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 ATP11AUNQ6ZP68 121 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 SMIM15Q7Z3B0 74 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 ATP6V0E2Q8NHE4 81 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 PRR15LQ9BU68 103 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 BPESC1Q9GZL8 116 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 BET1LQ9NYM9 111 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 KIF13AQ9H1H9 1805 aa-0.23□□□□□ -2.45
SNORA28-201ENST00000606769 AKAP11Q9UKA4 1901 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 TRAV2A0A0B4J234 112 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 GNG14A0A1W2PPG7 69 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 ZNF670-ZNF695F2Z2N8 137 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 TSTD3H0UI37 97 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 MORN2Q502X0 79 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 TCTE3Q8IZS6 198 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 C20orf197Q8N268 126 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 SKA2Q8WVK7 121 aaPredicted RBP-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 COA4Q9NYJ1 87 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 CALML5Q9NZT1 146 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 NOP16Q9Y3C1 178 aaKnown RBP-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 HSPB11Q9Y547 144 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 U3KQA8 63 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 PHIPQ8WWQ0 1821 aa-0.24□□□□□ -2.45
SNORA28-201ENST00000606769 MYO7AQ13402 2215 aa-0.25□□□□□ -2.45
SNORA28-201ENST00000606769 MACF1Q9UPN3 7388 aaKnown RBP-0.25□□□□□ -2.45
SNORA28-201ENST00000606769 FAM236AA0A1B0GUQ0 79 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms