RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 LINC00311Q8N616 119 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 ZNF418Q8TF45 676 aaPredicted RBP1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 BRK1Q8WUW1 75 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 C10orf82Q8WW14 230 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 ISOC1Q96CN7 298 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 COX14Q96I36 57 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 NAA38Q9BRA0 125 aaKnown RBP1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 C14orf132Q9NPU4 83 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 TNFSF18Q9UNG2 199 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 SCN8AQ9UQD0 1980 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 CACNA1AO00555 2505 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 NOTCH2Q04721 2471 aa1.72□□□□□ -2.13
AC004542.1-201ENST00000602955 PLXNA2O75051 1894 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 ZNF292O60281 2723 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 TRIOO75962 3097 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 EML6Q6ZMW3 1958 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 C2orf70A6NJV1 201 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 BBIP1A8MTZ0 92 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 CCL16O15467 120 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 SULT1C4O75897 302 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 S100PP25815 95 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 GNG2P59768 71 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 PDE6HQ13956 83 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 GLYATL3Q5SZD4 288 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 LINC00299Q6ZSB3 139 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 LINC00305Q7Z4B0 112 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 RPS19BP1Q86WX3 136 aaKnown RBP1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 TCTE3Q8IZS6 198 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 PPP3R2Q96LZ3 170 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 TP53RKQ96S44 253 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 ADAT1Q9BUB4 502 aaKnown RBP1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 PDCD10Q9BUL8 212 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 CBLN4Q9NTU7 201 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 CEP295Q9C0D2 2601 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 A0A0C4DFX4 3053 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 MPDZO75970 2070 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 RTTNQ86VV8 2226 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 VCANP13611 3396 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 REV3LO60673 3130 aa1.71□□□□□ -2.14
AC004542.1-201ENST00000602955 MYO18AQ92614 2054 aaKnown RBP1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 FN1P02751 2386 aaKnown RBP1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 TRGV2A0A075B6R0 118 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 A0A096LPI6 279 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 TRAV12-1A0A0B4J245 112 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 TRBV6-5A0A0K0K1A5 114 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 ATP6V1G2-DDX39BF2Z307 99 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 OR1I1O60431 355 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 IGF2P01344 180 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 APODP05090 189 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 DBIP07108 87 aaKnown RBP1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 SCTP09683 121 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 SMIM6P0DI80 62 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 LINC00694P0DN24 101 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 SDC2P34741 201 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 GNGT1P63211 74 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 HBBP68871 147 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 MRPS10P82664 201 aaKnown RBP1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 MORN2Q502X0 79 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 RIF1Q5UIP0 2472 aaKnown RBP1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 PATE2Q6UY27 113 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 PHF5AQ7RTV0 110 aaKnown RBP1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 ARPINQ7Z6K5 226 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 TMEM203Q969S6 136 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 ZNF625Q96I27 306 aaPredicted RBP1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 AP1S3Q96PC3 154 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 C2orf88Q9BSF0 95 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 OR5AC2Q9NZP5 309 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 ERG28Q9UKR5 140 aa1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 MDC1Q14676 2089 aaKnown RBP1.7□□□□□ -2.14
AC004542.1-201ENST00000602955 COL6A3P12111 3177 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 EP300Q09472 2414 aaPredicted RBP1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 CEP250Q9BV73 2442 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 SPTY2D1-AS1A0A0U1RR47 76 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 M0R2Z0 102 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 FXYD1O00168 92 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 CST7O76096 145 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 DPM2O94777 84 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 IFNA4P05014 189 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 TSPAN19P0C672 248 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 MAXP61244 160 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 C6orf52Q5T4I8 152 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 C4orf33Q8N1A6 199 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 OR51A4Q8NGJ6 313 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 SPANXDQ9BXN6 97 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 DNAJC15Q9Y5T4 150 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 SOX21Q9Y651 276 aaPredicted RBP1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 KNL1Q8NG31 2342 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 ANKRD36A6QL64 1941 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 TECTAO75443 2155 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 SPTA1P02549 2419 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 AHCTF1Q8WYP5 2266 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 EYSQ5T1H1 3165 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 CPAMD8Q8IZJ3 1885 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 NUMA1Q14980 2115 aa1.69□□□□□ -2.14
AC004542.1-201ENST00000602955 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
AC004542.1-201ENST00000602955 TRAV14DV4A0A0A6YYC5 116 aa1.68□□□□□ -2.14
AC004542.1-201ENST00000602955 TRAV13-1A0A0B4J241 112 aa1.68□□□□□ -2.14
AC004542.1-201ENST00000602955 IGHV1-58A0A0C4DH39 117 aa1.68□□□□□ -2.14
AC004542.1-201ENST00000602955 B4DSR2 109 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms