RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 ZNF575Q86XF7 245 aa10.39□□□□□ -0.75
USE1-210ENST00000601662 RNASE8Q8TDE3 154 aaKnown RBP10.39□□□□□ -0.75
USE1-210ENST00000601662 SSBP4Q9BWG4 385 aaPredicted RBP10.39□□□□□ -0.75
USE1-210ENST00000601662 NAT8BQ9UHF3 227 aa10.39□□□□□ -0.75
USE1-210ENST00000601662 ARMS2P0C7Q2 107 aa10.38□□□□□ -0.75
USE1-210ENST00000601662 TCL1AP56279 114 aa10.38□□□□□ -0.75
USE1-210ENST00000601662 WDR73Q6P4I2 378 aa10.38□□□□□ -0.75
USE1-210ENST00000601662 KCNIP4Q6PIL6 250 aa10.38□□□□□ -0.75
USE1-210ENST00000601662 BORCS7Q96B45 105 aa10.38□□□□□ -0.75
USE1-210ENST00000601662 GSN-AS1Q9NRJ2 163 aa10.38□□□□□ -0.75
USE1-210ENST00000601662 MDFICQ9P1T7 246 aa10.38□□□□□ -0.75
USE1-210ENST00000601662 KMT2CQ8NEZ4 4911 aaKnown RBP10.38□□□□□ -0.75
USE1-210ENST00000601662 HIGD1CA8MV81 97 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 SNAI2O43623 268 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 PRM2P04554 102 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 IGLC6P0CF74 106 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 GZMBP10144 247 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 RNASE3P12724 160 aaKnown RBP10.37□□□□□ -0.75
USE1-210ENST00000601662 CACNG7P62955 275 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 DAZ2Q13117 558 aaKnown RBP10.37□□□□□ -0.75
USE1-210ENST00000601662 C11orf72Q8NBR9 251 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 GTSF1Q8WW33 167 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 PTH2Q96A98 100 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 SCRT2Q9NQ03 307 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 PHLDA3Q9Y5J5 127 aa10.37□□□□□ -0.75
USE1-210ENST00000601662 TIMM8BQ9Y5J9 83 aaPredicted RBP10.37□□□□□ -0.75
USE1-210ENST00000601662 TRAV9-1A0A075B6T8 112 aa10.36□□□□□ -0.75
USE1-210ENST00000601662 H3BVH4 76 aa10.36□□□□□ -0.75
USE1-210ENST00000601662 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
USE1-210ENST00000601662 LYZL1Q6UWQ5 148 aa10.36□□□□□ -0.75
USE1-210ENST00000601662 SYT8Q8NBV8 401 aa10.36□□□□□ -0.75
USE1-210ENST00000601662 BTF3L4Q96K17 158 aa10.36□□□□□ -0.75
USE1-210ENST00000601662 TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
USE1-210ENST00000601662 TENM2Q9NT68 2774 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 STARD9Q9P2P6 4700 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 IGHV4-28A0A0C4DH34 117 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 M0R2P5 195 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 CTRLP40313 264 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 LGALS9BQ3B8N2 356 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 ATRAIDQ6UW56 229 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 Q8NAQ8 132 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 NUP35Q8NFH5 326 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 PGLYRP4Q96LB8 373 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 NDUFAF3Q9BU61 184 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 SMCO4Q9NRQ5 59 aa10.35□□□□□ -0.75
USE1-210ENST00000601662 A0A1B0GUT8 65 aa10.34□□□□□ -0.75
USE1-210ENST00000601662 TEX48A0A1B0GUV7 120 aa10.34□□□□□ -0.75
USE1-210ENST00000601662 RIGQ13278 110 aa10.34□□□□□ -0.75
USE1-210ENST00000601662 SPANXN1Q5VSR9 72 aa10.34□□□□□ -0.75
USE1-210ENST00000601662 ZFP82Q8N141 532 aa10.34□□□□□ -0.75
USE1-210ENST00000601662 CNFNQ9BYD5 112 aa10.34□□□□□ -0.75
USE1-210ENST00000601662 CSMD3Q7Z407 3707 aa10.33□□□□□ -0.76
USE1-210ENST00000601662 IGHV4-4A0A075B6R2 117 aa10.33□□□□□ -0.76
USE1-210ENST00000601662 A0A1B0GW15 77 aa10.33□□□□□ -0.76
USE1-210ENST00000601662 PLAC8L1A1L4L8 177 aa10.33□□□□□ -0.76
USE1-210ENST00000601662 LYRM9A8MSI8 78 aa10.33□□□□□ -0.76
USE1-210ENST00000601662 EMP1P54849 157 aa10.33□□□□□ -0.76
USE1-210ENST00000601662 FAM3BP58499 235 aaPredicted RBP10.33□□□□□ -0.76
USE1-210ENST00000601662 NANOS2P60321 138 aaKnown RBP10.33□□□□□ -0.76
USE1-210ENST00000601662 ZNF876PQ49A33 203 aa10.33□□□□□ -0.76
USE1-210ENST00000601662 C11orf45Q8TAV5 145 aa10.33□□□□□ -0.76
USE1-210ENST00000601662 RASL10AQ92737 203 aa10.33□□□□□ -0.76
USE1-210ENST00000601662 C11orf68Q9H3H3 251 aaKnown RBP10.33□□□□□ -0.76
USE1-210ENST00000601662 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
USE1-210ENST00000601662 SPINK4O60575 86 aa10.32□□□□□ -0.76
USE1-210ENST00000601662 S100A8P05109 93 aa10.32□□□□□ -0.76
USE1-210ENST00000601662 SPART-AS1P0CW21 52 aa10.32□□□□□ -0.76
USE1-210ENST00000601662 M0R381 172 aa10.31□□□□□ -0.76
USE1-210ENST00000601662 NXPH4O95158 308 aa10.31□□□□□ -0.76
USE1-210ENST00000601662 NTF3P20783 257 aa10.31□□□□□ -0.76
USE1-210ENST00000601662 TWIST1Q15672 202 aa10.31□□□□□ -0.76
USE1-210ENST00000601662 DMRTA1Q5VZB9 504 aa10.31□□□□□ -0.76
USE1-210ENST00000601662 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
USE1-210ENST00000601662 ATP5L2Q7Z4Y8 100 aa10.31□□□□□ -0.76
USE1-210ENST00000601662 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
USE1-210ENST00000601662 URGCP-MRPS24S4R325 110 aa10.31□□□□□ -0.76
USE1-210ENST00000601662 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
USE1-210ENST00000601662 TRGV1A0A0A0MS02 117 aa10.3□□□□□ -0.76
USE1-210ENST00000601662 TRGC1P0CF51 173 aa10.3□□□□□ -0.76
USE1-210ENST00000601662 RASL11AQ6T310 242 aa10.3□□□□□ -0.76
USE1-210ENST00000601662 PHLDA1Q8WV24 401 aaPredicted RBP10.3□□□□□ -0.76
USE1-210ENST00000601662 DKK2Q9UBU2 259 aa10.3□□□□□ -0.76
USE1-210ENST00000601662 MUC21A0A0G2JKD1 596 aa10.29□□□□□ -0.76
USE1-210ENST00000601662 MUC21A0A140T8X8 626 aa10.29□□□□□ -0.76
USE1-210ENST00000601662 A8MWV9 139 aa10.29□□□□□ -0.76
USE1-210ENST00000601662 CIDEAO60543 219 aa10.29□□□□□ -0.76
USE1-210ENST00000601662 SSTP61278 116 aa10.29□□□□□ -0.76
USE1-210ENST00000601662 COX19Q49B96 90 aa10.29□□□□□ -0.76
USE1-210ENST00000601662 FAM222AQ5U5X8 452 aa10.29□□□□□ -0.76
USE1-210ENST00000601662 TMEM88Q6PEY1 159 aa10.29□□□□□ -0.76
USE1-210ENST00000601662 CEMP1Q6PRD7 247 aaPredicted RBP10.29□□□□□ -0.76
USE1-210ENST00000601662 TRBV24-1A0A075B6N3 115 aa10.28□□□□□ -0.76
USE1-210ENST00000601662 NUPR2A6NF83 97 aa10.28□□□□□ -0.76
USE1-210ENST00000601662 HBBP68871 147 aa10.28□□□□□ -0.76
USE1-210ENST00000601662 ELOBQ15370 118 aa10.28□□□□□ -0.76
USE1-210ENST00000601662 Q6ZTI0 123 aa10.28□□□□□ -0.76
USE1-210ENST00000601662 LINC00612Q8N6U2 182 aa10.28□□□□□ -0.76
USE1-210ENST00000601662 C18orf15Q96N68 181 aa10.28□□□□□ -0.76
USE1-210ENST00000601662 MRPL16Q9NX20 251 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms