RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 GNG5P63218 68 aa10.23□□□□□ -0.77
SSBP4-211ENST00000601614 C14orf177Q52M58 125 aa10.23□□□□□ -0.77
SSBP4-211ENST00000601614 OR5C1Q8NGR4 320 aa10.23□□□□□ -0.77
SSBP4-211ENST00000601614 SDHCQ99643 169 aaPredicted RBP10.23□□□□□ -0.77
SSBP4-211ENST00000601614 SEC22CQ9BRL7 303 aa10.23□□□□□ -0.77
SSBP4-211ENST00000601614 JPT2Q9H910 190 aa10.23□□□□□ -0.77
SSBP4-211ENST00000601614 OTORQ9NRC9 128 aa10.23□□□□□ -0.77
SSBP4-211ENST00000601614 USP17L23D6RBM5 183 aa10.22□□□□□ -0.77
SSBP4-211ENST00000601614 S100A5P33763 92 aa10.22□□□□□ -0.77
SSBP4-211ENST00000601614 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
SSBP4-211ENST00000601614 C9orf163Q8N9P6 203 aa10.22□□□□□ -0.77
SSBP4-211ENST00000601614 NMES1Q9C002 83 aa10.22□□□□□ -0.77
SSBP4-211ENST00000601614 WDR61Q9GZS3 305 aaKnown RBP10.22□□□□□ -0.77
SSBP4-211ENST00000601614 TRIQKQ629K1 86 aa10.21□□□□□ -0.77
SSBP4-211ENST00000601614 ENHOQ6UWT2 76 aa10.21□□□□□ -0.77
SSBP4-211ENST00000601614 ZFP2Q6ZN57 461 aa10.21□□□□□ -0.77
SSBP4-211ENST00000601614 CMTM2Q8TAZ6 248 aa10.21□□□□□ -0.77
SSBP4-211ENST00000601614 GAS8-AS1O95177 125 aa10.2□□□□□ -0.78
SSBP4-211ENST00000601614 SEC11BP0C7V7 166 aa10.2□□□□□ -0.78
SSBP4-211ENST00000601614 SDIM1Q6ZPB5 146 aa10.2□□□□□ -0.78
SSBP4-211ENST00000601614 C1orf43Q9BWL3 253 aa10.2□□□□□ -0.78
SSBP4-211ENST00000601614 NOL3O60936 208 aaKnown RBP10.19□□□□□ -0.78
SSBP4-211ENST00000601614 KHDC3LQ587J8 217 aa10.19□□□□□ -0.78
SSBP4-211ENST00000601614 MBD2Q9UBB5 411 aa10.19□□□□□ -0.78
SSBP4-211ENST00000601614 A0A087WX48 190 aa10.18□□□□□ -0.78
SSBP4-211ENST00000601614 A0A0D9SG52 128 aa10.18□□□□□ -0.78
SSBP4-211ENST00000601614 A8MWV9 139 aa10.18□□□□□ -0.78
SSBP4-211ENST00000601614 GCGP01275 180 aa10.18□□□□□ -0.78
SSBP4-211ENST00000601614 HLA-DQA1P01909 254 aa10.18□□□□□ -0.78
SSBP4-211ENST00000601614 FGF8P55075 233 aaPredicted RBP10.18□□□□□ -0.78
SSBP4-211ENST00000601614 Q0VG73 95 aa10.18□□□□□ -0.78
SSBP4-211ENST00000601614 DMRTA1Q5VZB9 504 aa10.18□□□□□ -0.78
SSBP4-211ENST00000601614 OR10G9Q8NGN4 311 aa10.18□□□□□ -0.78
SSBP4-211ENST00000601614 CHCHD7Q9BUK0 85 aa10.18□□□□□ -0.78
SSBP4-211ENST00000601614 TRAV6A0A075B6T7 132 aa10.17□□□□□ -0.78
SSBP4-211ENST00000601614 TAAR5O14804 337 aa10.17□□□□□ -0.78
SSBP4-211ENST00000601614 CIRBPQ14011 172 aaKnown RBP10.17□□□□□ -0.78
SSBP4-211ENST00000601614 ELOBQ15370 118 aa10.17□□□□□ -0.78
SSBP4-211ENST00000601614 LGALSLQ3ZCW2 172 aaPredicted RBP10.17□□□□□ -0.78
SSBP4-211ENST00000601614 FFAR4Q5NUL3 377 aa10.17□□□□□ -0.78
SSBP4-211ENST00000601614 DGAT2L7PQ6IED9 249 aa10.17□□□□□ -0.78
SSBP4-211ENST00000601614 ARL6IP6Q8N6S5 226 aa10.17□□□□□ -0.78
SSBP4-211ENST00000601614 KCNIP2Q9NS61 270 aa10.17□□□□□ -0.78
SSBP4-211ENST00000601614 CENPXA8MT69 81 aa10.16□□□□□ -0.78
SSBP4-211ENST00000601614 PLA2G10O15496 165 aa10.16□□□□□ -0.78
SSBP4-211ENST00000601614 FAM74A1Q5RGS3 127 aa10.16□□□□□ -0.78
SSBP4-211ENST00000601614 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
SSBP4-211ENST00000601614 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
SSBP4-211ENST00000601614 LPAP08519 4548 aa10.15□□□□□ -0.78
SSBP4-211ENST00000601614 IGKV3D-20A0A0C4DH25 116 aa10.15□□□□□ -0.78
SSBP4-211ENST00000601614 TAS2R45P59539 299 aa10.15□□□□□ -0.78
SSBP4-211ENST00000601614 CNPY1Q3B7I2 92 aa10.15□□□□□ -0.78
SSBP4-211ENST00000601614 C15orf54Q8N8G6 183 aa10.15□□□□□ -0.78
SSBP4-211ENST00000601614 OR10G7Q8NGN6 311 aa10.15□□□□□ -0.78
SSBP4-211ENST00000601614 OR5AC2Q9NZP5 309 aa10.15□□□□□ -0.78
SSBP4-211ENST00000601614 C17orf112F2Z3M2 114 aa10.14□□□□□ -0.79
SSBP4-211ENST00000601614 TCRBP04435 133 aa10.14□□□□□ -0.79
SSBP4-211ENST00000601614 CHTF8P0CG12 524 aa10.14□□□□□ -0.79
SSBP4-211ENST00000601614 IL7P13232 177 aa10.14□□□□□ -0.79
SSBP4-211ENST00000601614 MPV17L2Q567V2 206 aa10.14□□□□□ -0.79
SSBP4-211ENST00000601614 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
SSBP4-211ENST00000601614 KRTAP26-1Q6PEX3 210 aa10.14□□□□□ -0.79
SSBP4-211ENST00000601614 OR2G3Q8NGZ4 309 aa10.14□□□□□ -0.79
SSBP4-211ENST00000601614 NDFIP1Q9BT67 221 aa10.14□□□□□ -0.79
SSBP4-211ENST00000601614 H0YIZ8 118 aa10.13□□□□□ -0.79
SSBP4-211ENST00000601614 RPL19P84098 196 aaKnown RBP10.13□□□□□ -0.79
SSBP4-211ENST00000601614 PSG8Q9UQ74 426 aa10.13□□□□□ -0.79
SSBP4-211ENST00000601614 A0A087WYN8 130 aa10.12□□□□□ -0.79
SSBP4-211ENST00000601614 TMEM262E9PQX1 116 aa10.12□□□□□ -0.79
SSBP4-211ENST00000601614 PHOX2AO14813 284 aa10.12□□□□□ -0.79
SSBP4-211ENST00000601614 HMGB3O15347 200 aaKnown RBP10.12□□□□□ -0.79
SSBP4-211ENST00000601614 CRPP02741 224 aa10.12□□□□□ -0.79
SSBP4-211ENST00000601614 FAM74A4Q5TZK3 123 aa10.12□□□□□ -0.79
SSBP4-211ENST00000601614 KCNIP4Q6PIL6 250 aa10.12□□□□□ -0.79
SSBP4-211ENST00000601614 NUDT15Q9NV35 164 aa10.12□□□□□ -0.79
SSBP4-211ENST00000601614 TCRAP04437 139 aa10.11□□□□□ -0.79
SSBP4-211ENST00000601614 UBE2D3P61077 147 aa10.11□□□□□ -0.79
SSBP4-211ENST00000601614 UBE2D2P62837 147 aa10.11□□□□□ -0.79
SSBP4-211ENST00000601614 SMUG1Q53HV7 270 aa10.11□□□□□ -0.79
SSBP4-211ENST00000601614 DPH3P1Q9H4G8 78 aa10.11□□□□□ -0.79
SSBP4-211ENST00000601614 A0A087WWL8 130 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 LYRM1O43325 122 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 SIX6O95475 246 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 ANGP03950 147 aaKnown RBP10.1□□□□□ -0.79
SSBP4-211ENST00000601614 S100A4P26447 101 aaKnown RBP10.1□□□□□ -0.79
SSBP4-211ENST00000601614 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 LRRC37A5PQ49AS3 106 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 PQLC2Q6ZP29 291 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 PRNTQ86SH4 94 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 HSD17B11Q8NBQ5 300 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 KRTAP9-2Q9BYQ4 174 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
SSBP4-211ENST00000601614 H3BVH4 76 aa10.09□□□□□ -0.79
SSBP4-211ENST00000601614 RHODO00212 210 aa10.09□□□□□ -0.79
SSBP4-211ENST00000601614 SLPIP03973 132 aa10.09□□□□□ -0.79
SSBP4-211ENST00000601614 FLI1Q01543 452 aaPredicted RBP10.09□□□□□ -0.79
SSBP4-211ENST00000601614 CLPSL2Q6UWE3 100 aa10.09□□□□□ -0.79
SSBP4-211ENST00000601614 IL36BQ9NZH7 164 aa10.09□□□□□ -0.79
SSBP4-211ENST00000601614 TRBV6-8A0A0A6YYG3 113 aa10.08□□□□□ -0.8
SSBP4-211ENST00000601614 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms