RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 LINC00477Q96M19 166 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 CACFD1Q9UGQ2 172 aa4.24□□□□□ -1.73
LINC00343-209ENST00000601607 H3BQ15 152 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 M0R3E3 92 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 GPX1P07203 203 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 CHTF8P0CG12 524 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 NCS1P62166 190 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 CIRBPQ14011 172 aaKnown RBP4.23□□□□□ -1.73
LINC00343-209ENST00000601607 Q1RN00 199 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 UBE2NLQ5JXB2 153 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 PATE2Q6UY27 113 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 SNX29P2Q8IUI4 249 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 ZFAND2AQ8N6M9 145 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 SAMD12Q8N8I0 201 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 SLC25A29Q8N8R3 303 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 ZFAND1Q8TCF1 268 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 NAA60Q9H7X0 242 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 RABL2AQ9UBK7 228 aaPredicted RBP4.23□□□□□ -1.73
LINC00343-209ENST00000601607 KLK12Q9UKR0 248 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 RABL2BQ9UNT1 228 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 PXMP4Q9Y6I8 212 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
LINC00343-209ENST00000601607 SMCO3A2RU48 225 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 OR10J4P0C629 311 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 IGLC2P0DOY2 106 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 CRISP2P16562 243 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 CCR6P51684 374 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 PLP1P60201 277 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 VBP1P61758 197 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 SMCO1Q147U7 214 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 SCGB2B2Q4G0G5 96 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 RNASE10Q5GAN6 216 aaKnown RBP4.22□□□□□ -1.73
LINC00343-209ENST00000601607 DPPA3Q6W0C5 159 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 MARCH1Q8TCQ1 289 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 C7orf33Q8WU49 177 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 DPH3Q96FX2 82 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 C2orf50Q96LR7 162 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 ARL6Q9H0F7 186 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 AGPAT4-IT1Q9H0P7 198 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 ARV1Q9H2C2 271 aa4.22□□□□□ -1.73
LINC00343-209ENST00000601607 TRAV34A0A0B4J273 112 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 LOC100506127A0A0U1RQW1 187 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 APOA1P02647 267 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 CD3DP04234 171 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 RHOHQ15669 191 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 TMEM183BQ1AE95 376 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 ATRAIDQ6UW56 229 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 SPINK6Q6UWN8 80 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 LINC00305Q7Z4B0 112 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 S100A7AQ86SG5 101 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 BPIFA4PQ86YQ2 179 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 TMEM183AQ8IXX5 376 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 TERB2Q8NHR7 220 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 GTSF1Q8WW33 167 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 DEDD2Q8WXF8 326 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 PRADC1Q9BSG0 188 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 RTBDNQ9BSG5 229 aaPredicted RBP4.21□□□□□ -1.74
LINC00343-209ENST00000601607 SPXQ9BT56 116 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 SRRQ9GZT4 340 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 OR51M1Q9H341 326 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 VAX2Q9UIW0 290 aa4.21□□□□□ -1.74
LINC00343-209ENST00000601607 IGKV2-40A0A087WW87 121 aaPredicted RBP4.2□□□□□ -1.74
LINC00343-209ENST00000601607 IGHV3-73A0A0B4J1V6 119 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 FBLL1A6NHQ2 334 aaKnown RBP4.2□□□□□ -1.74
LINC00343-209ENST00000601607 H3BP45 60 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 CTDSPLO15194 276 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 IGKV2D-40P01614 121 aaPredicted RBP4.2□□□□□ -1.74
LINC00343-209ENST00000601607 HLA-DQA1P01909 254 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 AKR1C4P17516 323 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 POLR2GP62487 172 aaKnown RBP eCLIP4.2□□□□□ -1.74
LINC00343-209ENST00000601607 RPL19P84098 196 aaKnown RBP4.2□□□□□ -1.74
LINC00343-209ENST00000601607 PRR4Q16378 134 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 KRTAP13-3Q3SY46 172 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 LYZL2Q7Z4W2 148 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 NIT1Q86X76 327 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 SPACA4Q8TDM5 124 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 AP3S1Q92572 193 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 RNF185Q96GF1 192 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 MIXL1Q9H2W2 232 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 PLAC8Q9NZF1 115 aa4.2□□□□□ -1.74
LINC00343-209ENST00000601607 C14orf166Q9Y224 244 aaKnown RBP4.2□□□□□ -1.74
LINC00343-209ENST00000601607 A0A0B4J2A0 478 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 TRBV6-4A0A1B0GX49 114 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 C5orf51A6NDU8 294 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 H7C1H1 209 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 M0R2P5 195 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 NOL3O60936 208 aaKnown RBP4.19□□□□□ -1.74
LINC00343-209ENST00000601607 ZNF253O75346 499 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 NMBP08949 121 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 TGFBR1P36897 503 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 UBE2MP61081 183 aaKnown RBP4.19□□□□□ -1.74
LINC00343-209ENST00000601607 SELENOTP62341 195 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 SLC38A11Q08AI6 406 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 Q8TAT8 98 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 S100ZQ8WXG8 99 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 SHPKQ9UHJ6 478 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 RNF24Q9Y225 148 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 URGCP-MRPS24S4R325 110 aa4.19□□□□□ -1.74
LINC00343-209ENST00000601607 V9GYH0 126 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms