RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 TPPP3Q9BW30 176 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
SHKBP1-211ENST00000595945 A0A1B0GW15 77 aa10.66□□□□□ -0.7
SHKBP1-211ENST00000595945 AZU1P20160 251 aa10.66□□□□□ -0.7
SHKBP1-211ENST00000595945 CACNG7P62955 275 aa10.66□□□□□ -0.7
SHKBP1-211ENST00000595945 HBBP68871 147 aa10.66□□□□□ -0.7
SHKBP1-211ENST00000595945 COX19Q49B96 90 aa10.66□□□□□ -0.7
SHKBP1-211ENST00000595945 MUC21A0A0G2JKD1 596 aa10.65□□□□□ -0.7
SHKBP1-211ENST00000595945 MUC21A0A140T8X8 626 aa10.65□□□□□ -0.7
SHKBP1-211ENST00000595945 K7EIL1 84 aa10.65□□□□□ -0.7
SHKBP1-211ENST00000595945 TMEM136Q6ZRR5 245 aa10.65□□□□□ -0.7
SHKBP1-211ENST00000595945 IL17DQ8TAD2 202 aa10.65□□□□□ -0.7
SHKBP1-211ENST00000595945 BORCS7Q96B45 105 aa10.65□□□□□ -0.7
SHKBP1-211ENST00000595945 X6R8D5 127 aa10.65□□□□□ -0.7
SHKBP1-211ENST00000595945 IGHV3OR16-12A0A075B7B8 117 aa10.64□□□□□ -0.71
SHKBP1-211ENST00000595945 SPRY2O43597 315 aa10.64□□□□□ -0.71
SHKBP1-211ENST00000595945 NTF3P20783 257 aa10.64□□□□□ -0.71
SHKBP1-211ENST00000595945 ZNF415Q09FC8 603 aa10.64□□□□□ -0.71
SHKBP1-211ENST00000595945 RNASE8Q8TDE3 154 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-211ENST00000595945 PTH2Q96A98 100 aa10.64□□□□□ -0.71
SHKBP1-211ENST00000595945 GNB1LQ9BYB4 327 aa10.64□□□□□ -0.71
SHKBP1-211ENST00000595945 MSRB1Q9NZV6 116 aa10.64□□□□□ -0.71
SHKBP1-211ENST00000595945 TIMM8BQ9Y5J9 83 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-211ENST00000595945 TENM3Q9P273 2699 aa10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 S100A8P05109 93 aa10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 HTN1P15515 57 aa10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 RPS10P46783 165 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 CAMPP49913 170 aa10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 ZNF493Q6ZR52 646 aa10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 Q6ZWC4 215 aa10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 RNF183Q96D59 192 aa10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 SPXQ9BT56 116 aa10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 PHLDA3Q9Y5J5 127 aa10.63□□□□□ -0.71
SHKBP1-211ENST00000595945 PLAC8L1A1L4L8 177 aa10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 PHOX2AO14813 284 aa10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 PRB2P02812 416 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 MT-ND6P03923 174 aa10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 TWIST1Q15672 202 aa10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 RRN3P1Q2M238 152 aa10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 DEFB135Q30KP9 77 aa10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 SPANXN1Q5VSR9 72 aa10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 ZFP82Q8N141 532 aa10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 GSN-AS1Q9NRJ2 163 aa10.62□□□□□ -0.71
SHKBP1-211ENST00000595945 SMIM9A6NGZ8 99 aa10.61□□□□□ -0.71
SHKBP1-211ENST00000595945 SNURFLB1AK76 121 aa10.61□□□□□ -0.71
SHKBP1-211ENST00000595945 HLA-DQA1P01909 254 aa10.61□□□□□ -0.71
SHKBP1-211ENST00000595945 PIK3CD-AS1Q5SR53 167 aa10.61□□□□□ -0.71
SHKBP1-211ENST00000595945 DMRTA1Q5VZB9 504 aa10.61□□□□□ -0.71
SHKBP1-211ENST00000595945 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
SHKBP1-211ENST00000595945 TMEM191AQ9H0A3 160 aa10.61□□□□□ -0.71
SHKBP1-211ENST00000595945 M0R2P5 195 aa10.6□□□□□ -0.71
SHKBP1-211ENST00000595945 M0R381 172 aa10.6□□□□□ -0.71
SHKBP1-211ENST00000595945 RCHY1Q96PM5 261 aa10.6□□□□□ -0.71
SHKBP1-211ENST00000595945 TRAPPC1Q9Y5R8 145 aa10.6□□□□□ -0.71
SHKBP1-211ENST00000595945 TRGC2P03986 189 aa10.59□□□□□ -0.71
SHKBP1-211ENST00000595945 RAB4BP61018 213 aa10.59□□□□□ -0.71
SHKBP1-211ENST00000595945 SSTP61278 116 aa10.59□□□□□ -0.71
SHKBP1-211ENST00000595945 DAZ2Q13117 558 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-211ENST00000595945 SYT8Q8NBV8 401 aa10.59□□□□□ -0.71
SHKBP1-211ENST00000595945 OVOL2Q9BRP0 275 aa10.59□□□□□ -0.71
SHKBP1-211ENST00000595945 MRPL18Q9H0U6 180 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-211ENST00000595945 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
SHKBP1-211ENST00000595945 TRGC1P0CF51 173 aa10.58□□□□□ -0.72
SHKBP1-211ENST00000595945 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
SHKBP1-211ENST00000595945 SLAQ13239 276 aa10.58□□□□□ -0.72
SHKBP1-211ENST00000595945 FAM104BQ5XKR9 115 aa10.58□□□□□ -0.72
SHKBP1-211ENST00000595945 OR11H2Q8NH07 326 aa10.58□□□□□ -0.72
SHKBP1-211ENST00000595945 NDUFAF3Q9BU61 184 aa10.58□□□□□ -0.72
SHKBP1-211ENST00000595945 KIF25-AS1Q9Y6Z4 181 aa10.58□□□□□ -0.72
SHKBP1-211ENST00000595945 EVI2AP22794 236 aa10.57□□□□□ -0.72
SHKBP1-211ENST00000595945 ZNF876PQ49A33 203 aa10.57□□□□□ -0.72
SHKBP1-211ENST00000595945 RASL10AQ92737 203 aa10.57□□□□□ -0.72
SHKBP1-211ENST00000595945 RNF185Q96GF1 192 aa10.57□□□□□ -0.72
SHKBP1-211ENST00000595945 AP1S3Q96PC3 154 aa10.57□□□□□ -0.72
SHKBP1-211ENST00000595945 JPT2Q9H910 190 aa10.57□□□□□ -0.72
SHKBP1-211ENST00000595945 APCSP02743 223 aa10.56□□□□□ -0.72
SHKBP1-211ENST00000595945 MIFP14174 115 aa10.56□□□□□ -0.72
SHKBP1-211ENST00000595945 LINC00315P59091 139 aa10.56□□□□□ -0.72
SHKBP1-211ENST00000595945 LGALS9BQ3B8N2 356 aa10.56□□□□□ -0.72
SHKBP1-211ENST00000595945 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
SHKBP1-211ENST00000595945 Q8NAQ8 132 aa10.56□□□□□ -0.72
SHKBP1-211ENST00000595945 FRZBQ92765 325 aa10.56□□□□□ -0.72
SHKBP1-211ENST00000595945 MRPL16Q9NX20 251 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-211ENST00000595945 IGHV4-28A0A0C4DH34 117 aa10.55□□□□□ -0.72
SHKBP1-211ENST00000595945 C1orf196B1AJZ1 125 aa10.55□□□□□ -0.72
SHKBP1-211ENST00000595945 CRYGDP07320 174 aa10.55□□□□□ -0.72
SHKBP1-211ENST00000595945 RAB4AP20338 218 aa10.55□□□□□ -0.72
SHKBP1-211ENST00000595945 AMN1Q8IY45 258 aa10.55□□□□□ -0.72
SHKBP1-211ENST00000595945 LINC00612Q8N6U2 182 aa10.55□□□□□ -0.72
SHKBP1-211ENST00000595945 DPH3P1Q9H4G8 78 aa10.55□□□□□ -0.72
SHKBP1-211ENST00000595945 NOP10Q9NPE3 64 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-211ENST00000595945 RS1O15537 224 aa10.54□□□□□ -0.72
SHKBP1-211ENST00000595945 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-211ENST00000595945 UFSP1Q6NVU6 142 aa10.54□□□□□ -0.72
SHKBP1-211ENST00000595945 Q6ZTI0 123 aa10.54□□□□□ -0.72
SHKBP1-211ENST00000595945 SMIM15Q7Z3B0 74 aa10.54□□□□□ -0.72
SHKBP1-211ENST00000595945 SBSPONQ8IVN8 264 aa10.54□□□□□ -0.72
SHKBP1-211ENST00000595945 C14orf178Q8N769 122 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-211ENST00000595945 RETNQ9HD89 108 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms