RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 OR2T10Q8NGZ9 312 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 TYMSOSQ8TAI1 123 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 RMI2Q96E14 147 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 PPP3R2Q96LZ3 170 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 AP1S3Q96PC3 154 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 DERL1Q9BUN8 251 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 TUBA4BQ9H853 241 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 IL36BQ9NZH7 164 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 FUT9Q9Y231 359 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 RNF11Q9Y3C5 154 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 AP4S1Q9Y587 144 aa2.79□□□□□ -1.96
LINC00649-204ENST00000593977 A0A087WXM4 84 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 IGHV3-21A0A0B4J1V1 117 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 C20orf202A1L168 122 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 A6NDX4 124 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 K7ERS5 55 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 WISP3O95389 354 aaPredicted RBP2.78□□□□□ -1.96
LINC00649-204ENST00000593977 IGLC6P0CF74 106 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 MUC1P15941 1255 aaPredicted RBP2.78□□□□□ -1.96
LINC00649-204ENST00000593977 ATP6V0CP27449 155 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 PSMB8P28062 276 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 AKR1D1P51857 326 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 COPZ1P61923 177 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 MRPS10P82664 201 aaKnown RBP2.78□□□□□ -1.96
LINC00649-204ENST00000593977 ZNF117Q03924 483 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 MSMO1Q15800 293 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 ZNF141Q15928 474 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 SPANXN3Q5MJ09 141 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 TMEM69Q5SWH9 247 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 FAM104BQ5XKR9 115 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 AMTNQ6UX39 209 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 ZFAND2AQ8N6M9 145 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 Q8N9W7 124 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 RPS4Y2Q8TD47 263 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 TMEM106AQ96A25 262 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 NIT2Q9NQR4 276 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 ZNF222Q9UK12 451 aa2.78□□□□□ -1.96
LINC00649-204ENST00000593977 TRAV40A0A0B4J280 105 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 IGKV1-9A0A0C4DH69 117 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 LOC100130705A0A1B0GUX0 176 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 TMEM223A0PJW6 202 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 A8MWP4 228 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 J3QR89 54 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 TMEM256-PLSCR3K7ERE1 68 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 CORTO00230 105 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 TRGV3P03979 118 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 SDC2P34741 201 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 CSN1S1P47710 185 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 TMBIM6P55061 237 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 ZNF846Q147U1 533 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 ZNF181Q2M3W8 571 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 MRPL51Q4U2R6 128 aaKnown RBP2.77□□□□□ -1.97
LINC00649-204ENST00000593977 AMMECR1LQ6DCA0 310 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 GLIPR1L1Q6UWM5 242 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 COMMD6Q7Z4G1 85 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 ZNF329Q86UD4 541 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 ZNF101Q8IZC7 436 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 DEFB107AQ8IZN7 70 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 NAA38Q9BRA0 125 aaKnown RBP2.77□□□□□ -1.97
LINC00649-204ENST00000593977 ZNF471Q9BX82 626 aaPredicted RBP2.77□□□□□ -1.97
LINC00649-204ENST00000593977 GABARAPL1Q9H0R8 117 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 TMEM133Q9H2Q1 129 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 BAIAP2Q9UQB8 552 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 AGRNO00468 2067 aa2.77□□□□□ -1.97
LINC00649-204ENST00000593977 IGLV3-9A0A075B6K5 115 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 IGHV1-3A0A0C4DH29 117 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 A0A1B0GW54 56 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 TCRBV3S1A0A5B6 114 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 IRGMA1A4Y4 181 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 FAM168BA1KXE4 195 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 RBFOX2O43251 390 aaKnown RBP eCLIP2.76□□□□□ -1.97
LINC00649-204ENST00000593977 GGCTO75223 188 aaKnown RBP2.76□□□□□ -1.97
LINC00649-204ENST00000593977 NAPSAO96009 420 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 IGKV1D-33P01593 117 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 IGKV1-33P01594 117 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 GPX1P07203 203 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 CXCL1P09341 107 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 PRB4P10163 310 aaPredicted RBP2.76□□□□□ -1.97
LINC00649-204ENST00000593977 PTHLHP12272 177 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 LGALS3P17931 250 aaKnown RBP2.76□□□□□ -1.97
LINC00649-204ENST00000593977 RBM11P57052 281 aaKnown RBP2.76□□□□□ -1.97
LINC00649-204ENST00000593977 TSPEAR-AS2P59090 65 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 TMEM155Q4W5P6 130 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 LINC01554Q52M75 96 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 CTAGE3PQ8IX95 158 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 C3orf22Q8N5N4 141 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 S100ZQ8WXG8 99 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 HIST1H2BAQ96A08 127 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 CST9LQ9H4G1 147 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 TAF9BQ9HBM6 251 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 MDFICQ9P1T7 246 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 ZNRD1Q9P1U0 126 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 MARCOQ9UEW3 520 aaPredicted RBP2.76□□□□□ -1.97
LINC00649-204ENST00000593977 LINC00588Q9Y4M8 146 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 LRP1BQ9NZR2 4599 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 DNAH6Q9C0G6 4158 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 TNCP24821 2201 aa2.76□□□□□ -1.97
LINC00649-204ENST00000593977 FSIP2Q5CZC0 6907 aa2.75□□□□□ -1.97
LINC00649-204ENST00000593977 IGHV1-58A0A0C4DH39 117 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms