RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 LINC00614P0C842 121 aa9.83□□□□□ -0.84
VRK3-205ENST00000593919 SNHG12Q9BXW3 62 aa9.83□□□□□ -0.84
VRK3-205ENST00000593919 OR4C46A6NHA9 309 aa9.83□□□□□ -0.84
VRK3-205ENST00000593919 ZNF493Q6ZR52 646 aa9.83□□□□□ -0.84
VRK3-205ENST00000593919 ATOH7Q8N100 152 aa9.83□□□□□ -0.84
VRK3-205ENST00000593919 SPATA3Q8NHX4 192 aa9.83□□□□□ -0.84
VRK3-205ENST00000593919 A0A0J9YX75 114 aa9.82□□□□□ -0.84
VRK3-205ENST00000593919 IGLC6P0CF74 106 aa9.82□□□□□ -0.84
VRK3-205ENST00000593919 G0S2P27469 103 aa9.82□□□□□ -0.84
VRK3-205ENST00000593919 CTRLP40313 264 aa9.82□□□□□ -0.84
VRK3-205ENST00000593919 DEFB131AP59861 70 aa9.82□□□□□ -0.84
VRK3-205ENST00000593919 TWIST1Q15672 202 aa9.82□□□□□ -0.84
VRK3-205ENST00000593919 AMN1Q8IY45 258 aa9.82□□□□□ -0.84
VRK3-205ENST00000593919 C20orf144Q9BQM9 153 aa9.82□□□□□ -0.84
VRK3-205ENST00000593919 LENEPQ9Y5L5 61 aa9.82□□□□□ -0.84
VRK3-205ENST00000593919 A4D1N5 150 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 D6R8Y8 96 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 ZNF705AQ6ZN79 300 aaPredicted RBP9.81□□□□□ -0.84
VRK3-205ENST00000593919 ZNF575Q86XF7 245 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 ZNF747Q9BV97 191 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 MAP6D1Q9H9H5 199 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 SPATA45Q537H7 98 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 FAM104BQ5XKR9 115 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 FOXI2Q6ZQN5 318 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 LINC00173Q6ZV60 143 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 FAM19A4Q96LR4 140 aa9.81□□□□□ -0.84
VRK3-205ENST00000593919 TIMM8BQ9Y5J9 83 aaPredicted RBP9.81□□□□□ -0.84
VRK3-205ENST00000593919 CMYA5Q8N3K9 4069 aa9.8□□□□□ -0.84
VRK3-205ENST00000593919 ODF3L2Q3SX64 289 aa9.8□□□□□ -0.84
VRK3-205ENST00000593919 PRR9Q5T870 116 aa9.8□□□□□ -0.84
VRK3-205ENST00000593919 ZFAND2AQ8N6M9 145 aa9.8□□□□□ -0.84
VRK3-205ENST00000593919 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
VRK3-205ENST00000593919 OR2K2Q8NGT1 345 aa9.8□□□□□ -0.84
VRK3-205ENST00000593919 PKD1L1Q8TDX9 2849 aa9.8□□□□□ -0.84
VRK3-205ENST00000593919 KNCNA6PVL3 124 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 LEPROTL1O95214 131 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 IGKV3-20P01619 116 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 SPATA12Q7Z6I5 190 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 PRSS3P2Q8NHM4 247 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 MSRB1Q9NZV6 116 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 C11orf21Q9P2W6 132 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 ANK2Q01484 3957 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 LOC389332A0A1B0GUA5 103 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 RAB4AP20338 218 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 KIR3DS1Q14943 382 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 MRPL51Q4U2R6 128 aaKnown RBP9.79□□□□□ -0.84
VRK3-205ENST00000593919 FA2HQ7L5A8 372 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 APRG1Q8IVJ8 170 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 TMEM158Q8WZ71 300 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 PRELID3AQ96N28 172 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 MIEN1Q9BRT3 115 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 TMEM70Q9BUB7 260 aa9.79□□□□□ -0.84
VRK3-205ENST00000593919 IGKV3D-20A0A0C4DH25 116 aa9.78□□□□□ -0.84
VRK3-205ENST00000593919 TRBV7-9A0A0J9YWB2 115 aa9.78□□□□□ -0.84
VRK3-205ENST00000593919 SMKR1H3BMG3 65 aa9.78□□□□□ -0.84
VRK3-205ENST00000593919 C12orf54Q6X4T0 127 aa9.78□□□□□ -0.84
VRK3-205ENST00000593919 Q6ZQT7 251 aa9.78□□□□□ -0.84
VRK3-205ENST00000593919 ORMDL3Q8N138 153 aa9.78□□□□□ -0.84
VRK3-205ENST00000593919 U3KQK5 164 aa9.78□□□□□ -0.84
VRK3-205ENST00000593919 M0R143 59 aa9.77□□□□□ -0.84
VRK3-205ENST00000593919 DUSP14O95147 198 aaKnown RBP9.77□□□□□ -0.84
VRK3-205ENST00000593919 NCR2O95944 276 aa9.77□□□□□ -0.84
VRK3-205ENST00000593919 HLA-DRB4P13762 266 aa9.77□□□□□ -0.84
VRK3-205ENST00000593919 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.84
VRK3-205ENST00000593919 AP5S1Q9NUS5 200 aa9.77□□□□□ -0.84
VRK3-205ENST00000593919 HLA-DRB4X5D2U9 266 aa9.77□□□□□ -0.84
VRK3-205ENST00000593919 KLLNB2CW77 178 aa9.77□□□□□ -0.85
VRK3-205ENST00000593919 IFI27P40305 119 aaPredicted RBP9.77□□□□□ -0.85
VRK3-205ENST00000593919 INSL3P51460 131 aa9.77□□□□□ -0.85
VRK3-205ENST00000593919 C9orf66Q5T8R8 295 aa9.77□□□□□ -0.85
VRK3-205ENST00000593919 ODF3Q96PU9 254 aa9.77□□□□□ -0.85
VRK3-205ENST00000593919 OR11H12B2RN74 326 aa9.76□□□□□ -0.85
VRK3-205ENST00000593919 H0Y8G0 127 aa9.76□□□□□ -0.85
VRK3-205ENST00000593919 H3BMM0 161 aa9.76□□□□□ -0.85
VRK3-205ENST00000593919 OR5AL1P0C617 328 aa9.76□□□□□ -0.85
VRK3-205ENST00000593919 CKS2P33552 79 aa9.76□□□□□ -0.85
VRK3-205ENST00000593919 BEAN1Q3B7T3 259 aa9.76□□□□□ -0.85
VRK3-205ENST00000593919 SHISA2Q6UWI4 295 aa9.76□□□□□ -0.85
VRK3-205ENST00000593919 AMTNQ6UX39 209 aa9.76□□□□□ -0.85
VRK3-205ENST00000593919 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
VRK3-205ENST00000593919 SYS1-DBNDD2H3BUS1 97 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 CD7P09564 240 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 RNASE4P34096 147 aaKnown RBP9.75□□□□□ -0.85
VRK3-205ENST00000593919 CNFNQ9BYD5 112 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 TMEM191AQ9H0A3 160 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 A8MTW9 85 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 DLEU1O43261 78 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 NPYP01303 97 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 SPINK13Q1W4C9 94 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 DMRTA1Q5VZB9 504 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 WFDC9Q8NEX5 89 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 RNF185Q96GF1 192 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 TMEM208Q9BTX3 173 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 MAP1LC3CQ9BXW4 147 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 HSPB8Q9UJY1 196 aa9.75□□□□□ -0.85
VRK3-205ENST00000593919 TRAV12-2A0A075B6T6 113 aa9.74□□□□□ -0.85
VRK3-205ENST00000593919 LEPP41159 167 aa9.74□□□□□ -0.85
VRK3-205ENST00000593919 CDKN1BP46527 198 aa9.74□□□□□ -0.85
VRK3-205ENST00000593919 OR10AG1Q8NH19 301 aa9.74□□□□□ -0.85
VRK3-205ENST00000593919 TRAV9-2A0A087WT02 112 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms