RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 RCHY1Q96PM5 261 aa4.33□□□□□ -1.72
CAPNS1-208ENST00000589162 JPT2Q9H910 190 aa4.33□□□□□ -1.72
CAPNS1-208ENST00000589162 OSTCQ9NRP0 149 aa4.33□□□□□ -1.72
CAPNS1-208ENST00000589162 MSRB1Q9NZV6 116 aa4.33□□□□□ -1.72
CAPNS1-208ENST00000589162 LY96Q9Y6Y9 160 aa4.33□□□□□ -1.72
CAPNS1-208ENST00000589162 URGCP-MRPS24S4R325 110 aa4.33□□□□□ -1.72
CAPNS1-208ENST00000589162 ANK2Q01484 3957 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 TRRAPQ9Y4A5 3859 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 H7BYZ3 331 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 ASIPP42127 132 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 FOXA3P55318 350 aaPredicted RBP4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 PNRC1Q12796 327 aaPredicted RBP4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 RRN3P1Q2M238 152 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 LYZL1Q6UWQ5 148 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 SVBPQ8N300 66 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 C15orf54Q8N8G6 183 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 Q8NAQ8 132 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 C11orf72Q8NBR9 251 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 NEU1Q99519 415 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 PYGO2Q9BRQ0 406 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 C1QTNF4Q9BXJ3 329 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 NOP10Q9NPE3 64 aaKnown RBP4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 CELA1Q9UNI1 258 aa4.32□□□□□ -1.72
CAPNS1-208ENST00000589162 TGIF2-C20orf24A0A0A6YYL0 155 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 A0A0J9YWU9 116 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 GAGE12BA1L429 117 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 M0R381 172 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 UBE2CO00762 179 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 GAGE7O76087 117 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 SNAPINO95295 136 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 IGHV3-53P01767 116 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 MT-ND4LP03901 98 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 CXCL1P09341 107 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 IGLC6P0CF74 106 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 GAGE12FP0CL80 117 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 GAGE12GP0CL81 117 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 GAGE12IP0CL82 117 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 S100A4P26447 101 aaKnown RBP4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 MRPL54Q6P161 138 aaKnown RBP4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 Q6ZTI0 123 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 Q8N1X5 172 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 FER1L6-AS1Q8NA97 138 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 NUP35Q8NFH5 326 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 RNASE8Q8TDE3 154 aaKnown RBP4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 SMIM12Q96EX1 92 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 C9orf85Q96MD7 179 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 TM2D3Q9BRN9 247 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 IL36BQ9NZH7 164 aa4.31□□□□□ -1.72
CAPNS1-208ENST00000589162 MUC4Q99102 2169 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 TRGV11A0A075B6L2 103 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 TRGV1A0A0A0MS02 117 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 A0A1W2PPQ1 181 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 SMIM27A0A1W2PRY6 76 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 HIGD1CA8MV81 97 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 DEFB130BP0DP73 79 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 DEFB130AP0DP74 79 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 RPS20P60866 119 aaKnown RBP4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 ZNF415Q09FC8 603 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 RHEBQ15382 184 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 TDRG1Q3Y452 100 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 Q6ZWC4 215 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 TMEM256Q8N2U0 113 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 IL17DQ8TAD2 202 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 TSKUQ8WUA8 353 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 KCNS1Q96KK3 526 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 B9D2Q9BPU9 175 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 C20orf144Q9BQM9 153 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 SPATA25Q9BR10 227 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 SAMD10Q9BYL1 202 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 BIN3Q9NQY0 253 aa4.3□□□□□ -1.72
CAPNS1-208ENST00000589162 A0A087WWL8 130 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 A8MWL6 223 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 SNURFLB1AK76 121 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 PPP1R2P9O14990 202 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 SNAI2O43623 268 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 HTN3P15516 51 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 S100A1P23297 94 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 CTRLP40313 264 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 CAMPP49913 170 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 FAM222AQ5U5X8 452 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 CFAP161Q6P656 301 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 POM121L12Q8N7R1 296 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 TMEM263Q8WUH6 116 aaKnown RBP4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 C16orf74Q96GX8 76 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 YPEL4Q96NS1 127 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 LINC00467Q9BRT7 94 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 PHLDA3Q9Y5J5 127 aa4.29□□□□□ -1.72
CAPNS1-208ENST00000589162 DNAH3Q8TD57 4116 aa4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 A0A087WWC5 75 aa4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 GAS8-AS1O95177 125 aa4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 MGPP08493 103 aa4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 NTF3P20783 257 aa4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 EVI2AP22794 236 aa4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 NANOS2P60321 138 aaKnown RBP4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 ELOBQ15370 118 aa4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 TWIST1Q15672 202 aa4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 CT83Q5H943 113 aa4.28□□□□□ -1.72
CAPNS1-208ENST00000589162 DNLZQ5SXM8 178 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms