RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 NUDT11Q96G61 164 aa14.47□□□□□ -0.09
SRSF1-206ENST00000583741 A0A087WWC5 75 aa14.46□□□□□ -0.09
SRSF1-206ENST00000583741 FABP5P3A8MUU1 101 aa14.46□□□□□ -0.09
SRSF1-206ENST00000583741 PPP1R2P9O14990 202 aa14.46□□□□□ -0.09
SRSF1-206ENST00000583741 P01737 135 aa14.46□□□□□ -0.09
SRSF1-206ENST00000583741 PFN1P07737 140 aaKnown RBP14.46□□□□□ -0.09
SRSF1-206ENST00000583741 RNASE4P34096 147 aaKnown RBP14.46□□□□□ -0.09
SRSF1-206ENST00000583741 BTN1A1Q13410 526 aa14.46□□□□□ -0.09
SRSF1-206ENST00000583741 C1orf134Q5TEV5 83 aa14.46□□□□□ -0.09
SRSF1-206ENST00000583741 CTDSP1Q9GZU7 261 aa14.46□□□□□ -0.09
SRSF1-206ENST00000583741 H7BYZ3 331 aa14.45□□□□□ -0.1
SRSF1-206ENST00000583741 TRAV12-2A0A075B6T6 113 aa14.44□□□□□ -0.1
SRSF1-206ENST00000583741 TEX48A0A1B0GUV7 120 aa14.44□□□□□ -0.1
SRSF1-206ENST00000583741 C7orf71A4D174 169 aa14.44□□□□□ -0.1
SRSF1-206ENST00000583741 ZNF705GA8MUZ8 300 aaPredicted RBP14.44□□□□□ -0.1
SRSF1-206ENST00000583741 GATCO43716 136 aaKnown RBP14.44□□□□□ -0.1
SRSF1-206ENST00000583741 GFI1BQ5VTD9 330 aa14.44□□□□□ -0.1
SRSF1-206ENST00000583741 Q6AWC8 147 aa14.44□□□□□ -0.1
SRSF1-206ENST00000583741 TMEM88Q6PEY1 159 aa14.44□□□□□ -0.1
SRSF1-206ENST00000583741 APOBP04114 4563 aaKnown RBP14.44□□□□□ -0.1
SRSF1-206ENST00000583741 TRAV21A0A0B4J279 112 aa14.44□□□□□ -0.1
SRSF1-206ENST00000583741 C1orf158Q8N1D5 194 aa14.44□□□□□ -0.1
SRSF1-206ENST00000583741 RPP21Q9H633 154 aaKnown RBP14.44□□□□□ -0.1
SRSF1-206ENST00000583741 V9GYV3 84 aa14.44□□□□□ -0.1
SRSF1-206ENST00000583741 TMEM242Q9NWH2 141 aa14.43□□□□□ -0.1
SRSF1-206ENST00000583741 TRAV12-3A0A0B4J271 114 aa14.42□□□□□ -0.1
SRSF1-206ENST00000583741 SCO1O75880 301 aa14.42□□□□□ -0.1
SRSF1-206ENST00000583741 Q6ZQT7 251 aa14.42□□□□□ -0.1
SRSF1-206ENST00000583741 CRXO43186 299 aaPredicted RBP14.41□□□□□ -0.1
SRSF1-206ENST00000583741 ORM1P02763 201 aa14.41□□□□□ -0.1
SRSF1-206ENST00000583741 TNP2Q05952 138 aa14.41□□□□□ -0.1
SRSF1-206ENST00000583741 OR2D3Q8NGH3 330 aa14.41□□□□□ -0.1
SRSF1-206ENST00000583741 INSP01308 110 aa14.4□□□□□ -0.1
SRSF1-206ENST00000583741 RPL19P84098 196 aaKnown RBP14.4□□□□□ -0.1
SRSF1-206ENST00000583741 LINC01559Q495D7 138 aa14.4□□□□□ -0.1
SRSF1-206ENST00000583741 CT83Q5H943 113 aa14.4□□□□□ -0.1
SRSF1-206ENST00000583741 GOLT1BQ9Y3E0 138 aa14.4□□□□□ -0.1
SRSF1-206ENST00000583741 DNAH5Q8TE73 4624 aa14.4□□□□□ -0.1
SRSF1-206ENST00000583741 C16orf90A8MZG2 172 aa14.39□□□□□ -0.11
SRSF1-206ENST00000583741 ZNF324O75467 553 aaPredicted RBP14.39□□□□□ -0.11
SRSF1-206ENST00000583741 C11orf21Q9P2W6 132 aa14.39□□□□□ -0.11
SRSF1-206ENST00000583741 NAGKQ9UJ70 344 aa14.39□□□□□ -0.11
SRSF1-206ENST00000583741 DAD1P61803 113 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 CBLN2Q8IUK8 224 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 TMSB15BA0A087X1C1 80 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 A8MWL6 223 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 CDK2AP2O75956 126 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 RRN3P1Q2M238 152 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 MUC21Q5SSG8 566 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 C20orf144Q9BQM9 153 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 SMCO4Q9NRQ5 59 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 IL36BQ9NZH7 164 aa14.38□□□□□ -0.11
SRSF1-206ENST00000583741 IGKV3D-20A0A0C4DH25 116 aa14.37□□□□□ -0.11
SRSF1-206ENST00000583741 XKRY2A2RUG3 117 aa14.37□□□□□ -0.11
SRSF1-206ENST00000583741 RPS20P60866 119 aaKnown RBP14.37□□□□□ -0.11
SRSF1-206ENST00000583741 FAM159AQ6UWV7 190 aa14.37□□□□□ -0.11
SRSF1-206ENST00000583741 MAPKAPK5-AS1Q8N8E1 139 aa14.37□□□□□ -0.11
SRSF1-206ENST00000583741 TSKUQ8WUA8 353 aa14.37□□□□□ -0.11
SRSF1-206ENST00000583741 ANXA2RQ3ZCQ2 193 aa14.36□□□□□ -0.11
SRSF1-206ENST00000583741 C15orf53Q8NAA6 179 aa14.36□□□□□ -0.11
SRSF1-206ENST00000583741 IMMP2LQ96T52 175 aa14.36□□□□□ -0.11
SRSF1-206ENST00000583741 HERC1Q15751 4861 aa14.35□□□□□ -0.11
SRSF1-206ENST00000583741 PRM2P04554 102 aa14.35□□□□□ -0.11
SRSF1-206ENST00000583741 GZMBP10144 247 aa14.35□□□□□ -0.11
SRSF1-206ENST00000583741 S100PP25815 95 aa14.35□□□□□ -0.11
SRSF1-206ENST00000583741 TCL1AP56279 114 aa14.35□□□□□ -0.11
SRSF1-206ENST00000583741 FAM3BP58499 235 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-206ENST00000583741 KCNIP4Q6PIL6 250 aa14.35□□□□□ -0.11
SRSF1-206ENST00000583741 KCNS1Q96KK3 526 aa14.35□□□□□ -0.11
SRSF1-206ENST00000583741 URGCP-MRPS24S4R325 110 aa14.35□□□□□ -0.11
SRSF1-206ENST00000583741 SMIM27A0A1W2PRY6 76 aa14.34□□□□□ -0.11
SRSF1-206ENST00000583741 GFRA4Q9GZZ7 299 aa14.34□□□□□ -0.11
SRSF1-206ENST00000583741 IGHV1OR15-1A0A075B7D0 117 aa14.33□□□□□ -0.12
SRSF1-206ENST00000583741 NBDYA0A0U1RRE5 68 aa14.33□□□□□ -0.12
SRSF1-206ENST00000583741 GRIFINA4D1Z8 144 aa14.33□□□□□ -0.12
SRSF1-206ENST00000583741 TDRG1Q3Y452 100 aa14.33□□□□□ -0.12
SRSF1-206ENST00000583741 TMEM256Q8N2U0 113 aa14.33□□□□□ -0.12
SRSF1-206ENST00000583741 ZNRF2Q8NHG8 242 aa14.33□□□□□ -0.12
SRSF1-206ENST00000583741 TMEM208Q9BTX3 173 aa14.33□□□□□ -0.12
SRSF1-206ENST00000583741 FAM231BA6NCW3 169 aa14.32□□□□□ -0.12
SRSF1-206ENST00000583741 CXCL1P09341 107 aa14.32□□□□□ -0.12
SRSF1-206ENST00000583741 GTSF1Q8WW33 167 aa14.32□□□□□ -0.12
SRSF1-206ENST00000583741 PYGO2Q9BRQ0 406 aa14.32□□□□□ -0.12
SRSF1-206ENST00000583741 NAT8BQ9UHF3 227 aa14.32□□□□□ -0.12
SRSF1-206ENST00000583741 HIGD1CA8MV81 97 aa14.31□□□□□ -0.12
SRSF1-206ENST00000583741 C6orf223Q8N319 242 aa14.31□□□□□ -0.12
SRSF1-206ENST00000583741 LINC01587Q99440 93 aa14.31□□□□□ -0.12
SRSF1-206ENST00000583741 A0A1W2PPQ1 181 aa14.31□□□□□ -0.12
SRSF1-206ENST00000583741 TYMSP04818 313 aa14.31□□□□□ -0.12
SRSF1-206ENST00000583741 ELOBQ15370 118 aa14.31□□□□□ -0.12
SRSF1-206ENST00000583741 GNRH2O43555 120 aa14.3□□□□□ -0.12
SRSF1-206ENST00000583741 ASIPP42127 132 aa14.3□□□□□ -0.12
SRSF1-206ENST00000583741 FER1L6-AS1Q8NA97 138 aa14.3□□□□□ -0.12
SRSF1-206ENST00000583741 NUP35Q8NFH5 326 aa14.3□□□□□ -0.12
SRSF1-206ENST00000583741 TPPP3Q9BW30 176 aa14.3□□□□□ -0.12
SRSF1-206ENST00000583741 CBY3A6NI87 242 aa14.29□□□□□ -0.12
SRSF1-206ENST00000583741 LYRM9A8MSI8 78 aa14.29□□□□□ -0.12
SRSF1-206ENST00000583741 IGLC6P0CF74 106 aa14.29□□□□□ -0.12
SRSF1-206ENST00000583741 DEFB130BP0DP73 79 aa14.29□□□□□ -0.12
SRSF1-206ENST00000583741 DEFB130AP0DP74 79 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms